RNA–Protein interactions for RNA: ENST00000486911.2

C9orf85-206, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5 BASIC

Gene C9orf85, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-206ENST00000486911 FMN1Q68DA7 1419 aa13.65□□□□□ -0.22
C9orf85-206ENST00000486911 NBPF8Q3BBV2 869 aa13.65□□□□□ -0.22
C9orf85-206ENST00000486911 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
C9orf85-206ENST00000486911 MS4A1P11836 297 aa13.64□□□□□ -0.23
C9orf85-206ENST00000486911 TMC1Q8TDI8 760 aa13.64□□□□□ -0.23
C9orf85-206ENST00000486911 RSPH6AQ9H0K4 717 aa13.64□□□□□ -0.23
C9orf85-206ENST00000486911 PCF11O94913 1555 aaKnown RBP13.64□□□□□ -0.23
C9orf85-206ENST00000486911 MTUS2Q5JR59 1369 aa13.63□□□□□ -0.23
C9orf85-206ENST00000486911 PKNOX2Q96KN3 472 aa13.62□□□□□ -0.23
C9orf85-206ENST00000486911 PTPN23Q9H3S7 1636 aa13.62□□□□□ -0.23
C9orf85-206ENST00000486911 PNISRQ8TF01 805 aaKnown RBP13.61□□□□□ -0.23
C9orf85-206ENST00000486911 RCAN3Q9UKA8 241 aa13.61□□□□□ -0.23
C9orf85-206ENST00000486911 MPHOSPH9Q99550 1183 aa13.6□□□□□ -0.23
C9orf85-206ENST00000486911 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
C9orf85-206ENST00000486911 FAM43AQ8N2R8 423 aa13.58□□□□□ -0.24
C9orf85-206ENST00000486911 DCAF11Q8TEB1 546 aa13.58□□□□□ -0.24
C9orf85-206ENST00000486911 CFAP43Q8NDM7 1665 aa13.58□□□□□ -0.24
C9orf85-206ENST00000486911 PLIN1O60240 522 aa13.57□□□□□ -0.24
C9orf85-206ENST00000486911 ZNF326Q5BKZ1 582 aaKnown RBP13.56□□□□□ -0.24
C9orf85-206ENST00000486911 DHX29Q7Z478 1369 aaKnown RBP13.56□□□□□ -0.24
C9orf85-206ENST00000486911 BICRAQ9NZM4 1560 aa13.54□□□□□ -0.24
C9orf85-206ENST00000486911 CASKIN1Q8WXD9 1431 aa13.54□□□□□ -0.24
C9orf85-206ENST00000486911 FYCO1Q9BQS8 1478 aa13.53□□□□□ -0.24
C9orf85-206ENST00000486911 DENND4BO75064 1496 aaPredicted RBP13.52□□□□□ -0.24
C9orf85-206ENST00000486911 CRBNQ96SW2 442 aa13.51□□□□□ -0.25
C9orf85-206ENST00000486911 SPATA31E1Q6ZUB1 1445 aa13.51□□□□□ -0.25
C9orf85-206ENST00000486911 GLIPR1L2Q4G1C9 344 aa13.51□□□□□ -0.25
C9orf85-206ENST00000486911 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
C9orf85-206ENST00000486911 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
C9orf85-206ENST00000486911 MYOM3Q5VTT5 1437 aa13.5□□□□□ -0.25
C9orf85-206ENST00000486911 FGD5Q6ZNL6 1462 aa13.5□□□□□ -0.25
C9orf85-206ENST00000486911 RRAGDQ9NQL2 400 aaPredicted RBP13.48□□□□□ -0.25
C9orf85-206ENST00000486911 ARXQ96QS3 562 aa13.47□□□□□ -0.25
C9orf85-206ENST00000486911 ZMYND15Q9H091 742 aa13.46□□□□□ -0.25
C9orf85-206ENST00000486911 POGKQ9P215 609 aa13.46□□□□□ -0.25
C9orf85-206ENST00000486911 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.26
C9orf85-206ENST00000486911 USP47Q96K76 1375 aa13.44□□□□□ -0.26
C9orf85-206ENST00000486911 NAP1L5Q96NT1 182 aaPredicted RBP13.44□□□□□ -0.26
C9orf85-206ENST00000486911 ANKRD30BQ9BXX2 1392 aa13.44□□□□□ -0.26
C9orf85-206ENST00000486911 RGS3P49796 1198 aa13.44□□□□□ -0.26
C9orf85-206ENST00000486911 CFTRP13569 1480 aa13.44□□□□□ -0.26
C9orf85-206ENST00000486911 FAM161AQ3B820 660 aa13.44□□□□□ -0.26
C9orf85-206ENST00000486911 LRPPRCP42704 1394 aaKnown RBP13.43□□□□□ -0.26
C9orf85-206ENST00000486911 C20orf194Q5TEA3 1177 aa13.43□□□□□ -0.26
C9orf85-206ENST00000486911 PDE3BQ13370 1112 aa13.42□□□□□ -0.26
C9orf85-206ENST00000486911 MYBBP1AQ9BQG0 1328 aaKnown RBP13.42□□□□□ -0.26
C9orf85-206ENST00000486911 KDM6BO15054 1643 aa13.42□□□□□ -0.26
C9orf85-206ENST00000486911 RPRD2Q5VT52 1461 aaKnown RBP13.41□□□□□ -0.26
C9orf85-206ENST00000486911 C8orf34Q49A92 452 aa13.41□□□□□ -0.26
C9orf85-206ENST00000486911 PODXL2Q9NZ53 605 aa13.41□□□□□ -0.26
C9orf85-206ENST00000486911 BRD4O60885 1362 aaPredicted RBP13.41□□□□□ -0.26
C9orf85-206ENST00000486911 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
C9orf85-206ENST00000486911 TEX14Q8IWB6 1497 aa13.4□□□□□ -0.26
C9orf85-206ENST00000486911 MIA2Q96PC5 1412 aa13.4□□□□□ -0.26
C9orf85-206ENST00000486911 ABCA5Q8WWZ7 1642 aa13.4□□□□□ -0.26
C9orf85-206ENST00000486911 ARID3CA6NKF2 412 aa13.39□□□□□ -0.27
C9orf85-206ENST00000486911 HSP90AA2PQ14568 343 aaPredicted RBP13.39□□□□□ -0.27
C9orf85-206ENST00000486911 RALBP1Q15311 655 aa13.39□□□□□ -0.27
C9orf85-206ENST00000486911 HECW1Q76N89 1606 aa13.38□□□□□ -0.27
C9orf85-206ENST00000486911 SLKQ9H2G2 1235 aaPredicted RBP13.38□□□□□ -0.27
C9orf85-206ENST00000486911 PNNQ9H307 717 aaKnown RBP13.38□□□□□ -0.27
C9orf85-206ENST00000486911 KTN1Q86UP2 1357 aaKnown RBP13.37□□□□□ -0.27
C9orf85-206ENST00000486911 CENPQQ7L2Z9 268 aaPredicted RBP13.37□□□□□ -0.27
C9orf85-206ENST00000486911 EFCAB5A4FU69 1503 aa13.37□□□□□ -0.27
C9orf85-206ENST00000486911 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
C9orf85-206ENST00000486911 L1TD1Q5T7N2 865 aaKnown RBP13.36□□□□□ -0.27
C9orf85-206ENST00000486911 KDM2BQ8NHM5 1336 aa13.36□□□□□ -0.27
C9orf85-206ENST00000486911 HSP90AA1P07900 732 aaKnown RBP13.36□□□□□ -0.27
C9orf85-206ENST00000486911 CARD11Q9BXL7 1154 aa13.36□□□□□ -0.27
C9orf85-206ENST00000486911 NLRP13Q86W25 1043 aa13.35□□□□□ -0.27
C9orf85-206ENST00000486911 ROCK2O75116 1388 aaKnown RBP13.35□□□□□ -0.27
C9orf85-206ENST00000486911 ARID4BQ4LE39 1312 aaPredicted RBP13.35□□□□□ -0.27
C9orf85-206ENST00000486911 BCORL1Q5H9F3 1711 aa13.34□□□□□ -0.27
C9orf85-206ENST00000486911 ST20-MTHFSA0A0A6YYL1 179 aa13.34□□□□□ -0.27
C9orf85-206ENST00000486911 KDM2AQ9Y2K7 1162 aa13.32□□□□□ -0.28
C9orf85-206ENST00000486911 GZF1Q9H116 711 aaPredicted RBP13.31□□□□□ -0.28
C9orf85-206ENST00000486911 SUPT6HQ7KZ85 1726 aaKnown RBP13.31□□□□□ -0.28
C9orf85-206ENST00000486911 RRP9O43818 475 aaKnown RBP13.3□□□□□ -0.28
C9orf85-206ENST00000486911 XRCC6P12956 609 aaKnown RBP eCLIP13.3□□□□□ -0.28
C9orf85-206ENST00000486911 CC2D1BQ5T0F9 858 aaKnown RBP13.3□□□□□ -0.28
C9orf85-206ENST00000486911 PANK2Q9BZ23 570 aa13.29□□□□□ -0.28
C9orf85-206ENST00000486911 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
C9orf85-206ENST00000486911 POLR1AO95602 1720 aaPredicted RBP13.29□□□□□ -0.28
C9orf85-206ENST00000486911 GOLGA6L3A6NEY3 463 aa13.29□□□□□ -0.28
C9orf85-206ENST00000486911 BECN1Q14457 450 aa13.29□□□□□ -0.28
C9orf85-206ENST00000486911 GCC2Q8IWJ2 1684 aa13.29□□□□□ -0.28
C9orf85-206ENST00000486911 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
C9orf85-206ENST00000486911 TCOF1Q13428 1488 aaKnown RBP13.27□□□□□ -0.28
C9orf85-206ENST00000486911 CLCN1P35523 988 aa13.27□□□□□ -0.28
C9orf85-206ENST00000486911 RAD54L2Q9Y4B4 1467 aa13.27□□□□□ -0.29
C9orf85-206ENST00000486911 PKD2Q13563 968 aa13.27□□□□□ -0.29
C9orf85-206ENST00000486911 GRIN2BQ13224 1484 aa13.27□□□□□ -0.29
C9orf85-206ENST00000486911 ZNF644Q9H582 1327 aaPredicted RBP13.27□□□□□ -0.29
C9orf85-206ENST00000486911 SEC24BO95487 1268 aa13.26□□□□□ -0.29
C9orf85-206ENST00000486911 MAGI3Q5TCQ9 1506 aa13.26□□□□□ -0.29
C9orf85-206ENST00000486911 SPRYD3Q8NCJ5 442 aa13.26□□□□□ -0.29
C9orf85-206ENST00000486911 USP19O94966 1318 aa13.25□□□□□ -0.29
C9orf85-206ENST00000486911 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
C9orf85-206ENST00000486911 PARD3Q8TEW0 1356 aa13.22□□□□□ -0.29
C9orf85-206ENST00000486911 HMGXB3Q12766 1538 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms