RNA–Protein interactions for RNA: ENST00000486746.5

TRAPPC10-212, Transcript of trafficking protein particle complex 10, humanhuman

TSL 5

Gene TRAPPC10, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-212ENST00000486746 BOLA1Q9Y3E2 137 aa12.63□□□□□ -0.39
TRAPPC10-212ENST00000486746 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
TRAPPC10-212ENST00000486746 MS4A4AQ96JQ5 239 aa12.57□□□□□ -0.4
TRAPPC10-212ENST00000486746 POTEMA6NI47 508 aa12.56□□□□□ -0.4
TRAPPC10-212ENST00000486746 LCE2DQ5TA82 110 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC10-212ENST00000486746 POTEGQ6S5H5 508 aa12.55□□□□□ -0.4
TRAPPC10-212ENST00000486746 NLRP6P59044 892 aa12.54□□□□□ -0.4
TRAPPC10-212ENST00000486746 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
TRAPPC10-212ENST00000486746 MFRPQ9BY79 579 aa12.52□□□□□ -0.41
TRAPPC10-212ENST00000486746 MICALL2Q8IY33 904 aa12.5□□□□□ -0.41
TRAPPC10-212ENST00000486746 FBXO22Q8NEZ5 403 aa12.5□□□□□ -0.41
TRAPPC10-212ENST00000486746 ATAD2BQ9ULI0 1458 aa12.49□□□□□ -0.41
TRAPPC10-212ENST00000486746 TMEM121BQ9BXQ6 578 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC10-212ENST00000486746 SNPHO15079 494 aa12.48□□□□□ -0.41
TRAPPC10-212ENST00000486746 ST18O60284 1047 aa12.48□□□□□ -0.41
TRAPPC10-212ENST00000486746 CHGAP10645 457 aaKnown RBP12.48□□□□□ -0.41
TRAPPC10-212ENST00000486746 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
TRAPPC10-212ENST00000486746 HS6ST3Q8IZP7 471 aa12.42□□□□□ -0.42
TRAPPC10-212ENST00000486746 TMEM92Q6UXU6 159 aa12.4□□□□□ -0.42
TRAPPC10-212ENST00000486746 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.43
TRAPPC10-212ENST00000486746 NCAPD3P42695 1498 aa12.38□□□□□ -0.43
TRAPPC10-212ENST00000486746 MARVELD3Q96A59 401 aa12.37□□□□□ -0.43
TRAPPC10-212ENST00000486746 PPP1R37O75864 691 aa12.35□□□□□ -0.43
TRAPPC10-212ENST00000486746 ABCC8Q09428 1581 aa12.32□□□□□ -0.44
TRAPPC10-212ENST00000486746 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC10-212ENST00000486746 ZNF710Q8N1W2 664 aa12.31□□□□□ -0.44
TRAPPC10-212ENST00000486746 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC10-212ENST00000486746 PLSCR2Q9NRY7 297 aa12.29□□□□□ -0.44
TRAPPC10-212ENST00000486746 DOK7Q18PE1 504 aa12.28□□□□□ -0.44
TRAPPC10-212ENST00000486746 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
TRAPPC10-212ENST00000486746 LOC105371045A0A1W2PR82 267 aa12.27□□□□□ -0.45
TRAPPC10-212ENST00000486746 EMP3P54852 163 aa12.27□□□□□ -0.45
TRAPPC10-212ENST00000486746 CDAN1Q8IWY9 1227 aa12.26□□□□□ -0.45
TRAPPC10-212ENST00000486746 PCDH10Q9P2E7 1040 aa12.26□□□□□ -0.45
TRAPPC10-212ENST00000486746 C2orf72A6NCS6 295 aa12.25□□□□□ -0.45
TRAPPC10-212ENST00000486746 EEA1Q15075 1411 aa12.24□□□□□ -0.45
TRAPPC10-212ENST00000486746 RIMBP2O15034 1052 aa12.23□□□□□ -0.45
TRAPPC10-212ENST00000486746 FAM205CA6NFA0 338 aa12.22□□□□□ -0.45
TRAPPC10-212ENST00000486746 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
TRAPPC10-212ENST00000486746 WRNQ14191 1432 aaPredicted RBP eCLIP12.21□□□□□ -0.45
TRAPPC10-212ENST00000486746 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
TRAPPC10-212ENST00000486746 DNAJC5Q9H3Z4 198 aa12.21□□□□□ -0.45
TRAPPC10-212ENST00000486746 SYNJ1O43426 1573 aa12.21□□□□□ -0.46
TRAPPC10-212ENST00000486746 KIF3CO14782 793 aa12.19□□□□□ -0.46
TRAPPC10-212ENST00000486746 HOXB1P14653 301 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC10-212ENST00000486746 TOP2BQ02880 1626 aa12.19□□□□□ -0.46
TRAPPC10-212ENST00000486746 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC10-212ENST00000486746 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
TRAPPC10-212ENST00000486746 RYDENQ9NUL5 291 aaKnown RBP12.17□□□□□ -0.46
TRAPPC10-212ENST00000486746 CFTRP13569 1480 aa12.16□□□□□ -0.46
TRAPPC10-212ENST00000486746 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
TRAPPC10-212ENST00000486746 POTEB3A0JP26 581 aa12.15□□□□□ -0.46
TRAPPC10-212ENST00000486746 POTEBQ6S5H4 581 aa12.15□□□□□ -0.46
TRAPPC10-212ENST00000486746 CC2D2AQ9P2K1 1620 aa12.15□□□□□ -0.47
TRAPPC10-212ENST00000486746 ARSIQ5FYB1 569 aa12.14□□□□□ -0.47
TRAPPC10-212ENST00000486746 ERBB3P21860 1342 aa12.13□□□□□ -0.47
TRAPPC10-212ENST00000486746 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
TRAPPC10-212ENST00000486746 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC10-212ENST00000486746 GPR153Q6NV75 609 aa12.12□□□□□ -0.47
TRAPPC10-212ENST00000486746 KHSRPQ92945 711 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAPPC10-212ENST00000486746 SOGA1O94964 1423 aa12.11□□□□□ -0.47
TRAPPC10-212ENST00000486746 KIF21BO75037 1637 aa12.11□□□□□ -0.47
TRAPPC10-212ENST00000486746 VARS2Q5ST30 1063 aaKnown RBP12.07□□□□□ -0.48
TRAPPC10-212ENST00000486746 FAM9AQ8IZU1 332 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC10-212ENST00000486746 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC10-212ENST00000486746 RUSC2Q8N2Y8 1516 aa12.06□□□□□ -0.48
TRAPPC10-212ENST00000486746 TNIKQ9UKE5 1360 aa12.05□□□□□ -0.48
TRAPPC10-212ENST00000486746 PLPP6Q8IY26 295 aa12.05□□□□□ -0.48
TRAPPC10-212ENST00000486746 CUX1P39880 1505 aa12.05□□□□□ -0.48
TRAPPC10-212ENST00000486746 DSG2Q14126 1118 aa12.04□□□□□ -0.48
TRAPPC10-212ENST00000486746 GOLGA3Q08378 1498 aa12.03□□□□□ -0.48
TRAPPC10-212ENST00000486746 NUDT7P0C024 238 aa12.03□□□□□ -0.48
TRAPPC10-212ENST00000486746 FOXK1P85037 733 aa12.03□□□□□ -0.48
TRAPPC10-212ENST00000486746 CEP164Q9UPV0 1460 aa12.02□□□□□ -0.48
TRAPPC10-212ENST00000486746 PCDHGA4Q9Y5G9 962 aa12.02□□□□□ -0.49
TRAPPC10-212ENST00000486746 CADPSQ9ULU8 1353 aa12.01□□□□□ -0.49
TRAPPC10-212ENST00000486746 SLC34A2O95436 690 aa12□□□□□ -0.49
TRAPPC10-212ENST00000486746 KRTAP3-3Q9BYR6 98 aa11.99□□□□□ -0.49
TRAPPC10-212ENST00000486746 KRTAP3-2Q9BYR7 98 aa11.99□□□□□ -0.49
TRAPPC10-212ENST00000486746 ERICH3Q5RHP9 1530 aa11.98□□□□□ -0.49
TRAPPC10-212ENST00000486746 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC10-212ENST00000486746 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC10-212ENST00000486746 BBXQ8WY36 941 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC10-212ENST00000486746 CRISPLD2Q9H0B8 497 aa11.97□□□□□ -0.49
TRAPPC10-212ENST00000486746 CEP162Q5TB80 1403 aa11.96□□□□□ -0.49
TRAPPC10-212ENST00000486746 NCKAP5LQ9HCH0 1330 aa11.96□□□□□ -0.49
TRAPPC10-212ENST00000486746 PDE4AP27815 886 aa11.96□□□□□ -0.49
TRAPPC10-212ENST00000486746 LAMC3Q9Y6N6 1575 aa11.94□□□□□ -0.5
TRAPPC10-212ENST00000486746 PPP1R15BQ5SWA1 713 aa11.94□□□□□ -0.5
TRAPPC10-212ENST00000486746 SPNS2Q8IVW8 549 aa11.94□□□□□ -0.5
TRAPPC10-212ENST00000486746 LARP6Q9BRS8 491 aaKnown RBP11.94□□□□□ -0.5
TRAPPC10-212ENST00000486746 LHX6Q9UPM6 363 aa11.94□□□□□ -0.5
TRAPPC10-212ENST00000486746 ZNF687Q8N1G0 1237 aa11.93□□□□□ -0.5
TRAPPC10-212ENST00000486746 PTCD2Q8WV60 388 aaKnown RBP11.93□□□□□ -0.5
TRAPPC10-212ENST00000486746 UPF1Q92900 1129 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRAPPC10-212ENST00000486746 PCGF6Q9BYE7 350 aa11.93□□□□□ -0.5
TRAPPC10-212ENST00000486746 PRXQ9BXM0 1461 aa11.93□□□□□ -0.5
TRAPPC10-212ENST00000486746 HRCP23327 699 aa11.91□□□□□ -0.5
TRAPPC10-212ENST00000486746 CADPS2Q86UW7 1296 aa11.91□□□□□ -0.5
TRAPPC10-212ENST00000486746 MYT1Q01538 1121 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms