RNA–Protein interactions for RNA: ENST00000486746.5

TRAPPC10-212, Transcript of trafficking protein particle complex 10, humanhuman

TSL 5

Gene TRAPPC10, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-212ENST00000486746 AEBP2Q6ZN18 517 aaPredicted RBP27.25■■□□□ 1.95
TRAPPC10-212ENST00000486746 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
TRAPPC10-212ENST00000486746 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
TRAPPC10-212ENST00000486746 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC10-212ENST00000486746 FOXD1Q16676 465 aa21.59■■□□□ 1.05
TRAPPC10-212ENST00000486746 PLPPR3Q6T4P5 718 aa21.04■□□□□ 0.96
TRAPPC10-212ENST00000486746 PPP6R1Q9UPN7 881 aa20.45■□□□□ 0.86
TRAPPC10-212ENST00000486746 ADRA2BP18089 450 aa20.43■□□□□ 0.86
TRAPPC10-212ENST00000486746 PIAS4Q8N2W9 510 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC10-212ENST00000486746 MSH5O43196 834 aa20.04■□□□□ 0.8
TRAPPC10-212ENST00000486746 POTEDQ86YR6 584 aa19.07■□□□□ 0.64
TRAPPC10-212ENST00000486746 MAPK8IP2Q13387 824 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC10-212ENST00000486746 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
TRAPPC10-212ENST00000486746 PPP4R3CPQ6ZMV5 832 aa18.52■□□□□ 0.56
TRAPPC10-212ENST00000486746 DMRT2Q9Y5R5 561 aa18.41■□□□□ 0.54
TRAPPC10-212ENST00000486746 CNKSR2Q8WXI2 1034 aa18.06■□□□□ 0.48
TRAPPC10-212ENST00000486746 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
TRAPPC10-212ENST00000486746 HOXD11P31277 338 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC10-212ENST00000486746 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC10-212ENST00000486746 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
TRAPPC10-212ENST00000486746 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
TRAPPC10-212ENST00000486746 KCNA4P22459 653 aa17.61■□□□□ 0.41
TRAPPC10-212ENST00000486746 RNF39Q9H2S5 420 aa17.13■□□□□ 0.33
TRAPPC10-212ENST00000486746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRAPPC10-212ENST00000486746 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC10-212ENST00000486746 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
TRAPPC10-212ENST00000486746 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
TRAPPC10-212ENST00000486746 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
TRAPPC10-212ENST00000486746 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC10-212ENST00000486746 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
TRAPPC10-212ENST00000486746 SLC4A1APQ9BWU0 796 aaKnown RBP16.68■□□□□ 0.26
TRAPPC10-212ENST00000486746 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC10-212ENST00000486746 CAPN15O75808 1086 aa16.42■□□□□ 0.22
TRAPPC10-212ENST00000486746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC10-212ENST00000486746 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
TRAPPC10-212ENST00000486746 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
TRAPPC10-212ENST00000486746 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC10-212ENST00000486746 APLP2Q06481 763 aa16.26■□□□□ 0.19
TRAPPC10-212ENST00000486746 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC10-212ENST00000486746 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC10-212ENST00000486746 ZBTB22O15209 634 aa16.18■□□□□ 0.18
TRAPPC10-212ENST00000486746 DSG3P32926 999 aa16.17■□□□□ 0.18
TRAPPC10-212ENST00000486746 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC10-212ENST00000486746 ABCB7O75027 752 aa16.08■□□□□ 0.16
TRAPPC10-212ENST00000486746 ATF5Q9Y2D1 282 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC10-212ENST00000486746 POLA2Q14181 598 aa15.84■□□□□ 0.13
TRAPPC10-212ENST00000486746 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
TRAPPC10-212ENST00000486746 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
TRAPPC10-212ENST00000486746 ATXN8OSP0DMR3 200 aa15.71■□□□□ 0.11
TRAPPC10-212ENST00000486746 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC10-212ENST00000486746 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
TRAPPC10-212ENST00000486746 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
TRAPPC10-212ENST00000486746 FBLN2P98095 1184 aa15.28■□□□□ 0.04
TRAPPC10-212ENST00000486746 MKRN4PQ13434 485 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC10-212ENST00000486746 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
TRAPPC10-212ENST00000486746 SPDYE2BA6NHP3 402 aa15.02■□□□□ -0
TRAPPC10-212ENST00000486746 SPDYE6P0CI01 402 aa15.02■□□□□ -0
TRAPPC10-212ENST00000486746 SPDYE2Q495Y8 402 aa15.02■□□□□ -0
TRAPPC10-212ENST00000486746 POTEHQ6S545 545 aa15.02■□□□□ -0
TRAPPC10-212ENST00000486746 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC10-212ENST00000486746 CHRDL2Q6WN34 429 aa14.97□□□□□ -0.01
TRAPPC10-212ENST00000486746 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC10-212ENST00000486746 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
TRAPPC10-212ENST00000486746 SSUH2Q9Y2M2 353 aa14.84□□□□□ -0.03
TRAPPC10-212ENST00000486746 CLEC11AQ9Y240 323 aa14.77□□□□□ -0.05
TRAPPC10-212ENST00000486746 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
TRAPPC10-212ENST00000486746 SPDYE1Q8NFV5 336 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC10-212ENST00000486746 PIP4P2Q8N4L2 257 aa14.69□□□□□ -0.06
TRAPPC10-212ENST00000486746 SPDYE4A6NLX3 237 aa14.66□□□□□ -0.06
TRAPPC10-212ENST00000486746 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRAPPC10-212ENST00000486746 CCDC180Q9P1Z9 1646 aa14.57□□□□□ -0.08
TRAPPC10-212ENST00000486746 PRR29P0C7W0 189 aa14.52□□□□□ -0.09
TRAPPC10-212ENST00000486746 PRKAR2AP13861 404 aaKnown RBP14.49□□□□□ -0.09
TRAPPC10-212ENST00000486746 CHADLQ6NUI6 762 aa14.44□□□□□ -0.1
TRAPPC10-212ENST00000486746 HAX1O00165 279 aa14.4□□□□□ -0.1
TRAPPC10-212ENST00000486746 STAG3Q9UJ98 1225 aa14.36□□□□□ -0.11
TRAPPC10-212ENST00000486746 FKBP8Q14318 412 aa14.29□□□□□ -0.12
TRAPPC10-212ENST00000486746 PROM2Q8N271 834 aa14.25□□□□□ -0.13
TRAPPC10-212ENST00000486746 EVX2Q03828 476 aa14.22□□□□□ -0.13
TRAPPC10-212ENST00000486746 SP7Q8TDD2 431 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC10-212ENST00000486746 CREBZFQ9NS37 354 aa14.2□□□□□ -0.14
TRAPPC10-212ENST00000486746 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC10-212ENST00000486746 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
TRAPPC10-212ENST00000486746 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
TRAPPC10-212ENST00000486746 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
TRAPPC10-212ENST00000486746 MIER1Q8N108 512 aa13.99□□□□□ -0.17
TRAPPC10-212ENST00000486746 MNX1P50219 401 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC10-212ENST00000486746 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRAPPC10-212ENST00000486746 DCAF1Q9Y4B6 1507 aa13.94□□□□□ -0.18
TRAPPC10-212ENST00000486746 PLEKHG5O94827 1062 aa13.92□□□□□ -0.18
TRAPPC10-212ENST00000486746 PLCD3Q8N3E9 789 aa13.92□□□□□ -0.18
TRAPPC10-212ENST00000486746 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
TRAPPC10-212ENST00000486746 GABBR2O75899 941 aa13.89□□□□□ -0.19
TRAPPC10-212ENST00000486746 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC10-212ENST00000486746 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
TRAPPC10-212ENST00000486746 ZNF579Q8NAF0 562 aaKnown RBP13.79□□□□□ -0.2
TRAPPC10-212ENST00000486746 TSPYL2Q9H2G4 693 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC10-212ENST00000486746 PHF12Q96QT6 1004 aa13.75□□□□□ -0.21
TRAPPC10-212ENST00000486746 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC10-212ENST00000486746 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms