RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 RAPGEF6Q8TEU7 1601 aa24.56■■□□□ 1.52
TNXB-205ENST00000486148 ABCC5O15440 1437 aa24.56■■□□□ 1.52
TNXB-205ENST00000486148 DNMT1P26358 1616 aaKnown RBP24.55■■□□□ 1.52
TNXB-205ENST00000486148 EIF4G3O43432 1585 aaKnown RBP24.55■■□□□ 1.52
TNXB-205ENST00000486148 WASHC2AQ641Q2 1341 aa24.55■■□□□ 1.52
TNXB-205ENST00000486148 ROCK1Q13464 1354 aa24.54■■□□□ 1.52
TNXB-205ENST00000486148 L3MBTL2Q969R5 705 aa24.54■■□□□ 1.52
TNXB-205ENST00000486148 EIF4G2P78344 907 aaKnown RBP eCLIP24.49■■□□□ 1.51
TNXB-205ENST00000486148 ANKRD30BQ9BXX2 1392 aa24.48■■□□□ 1.51
TNXB-205ENST00000486148 CDK11AQ9UQ88 783 aaPredicted RBP24.46■■□□□ 1.51
TNXB-205ENST00000486148 PRG4Q92954 1404 aaPredicted RBP24.46■■□□□ 1.51
TNXB-205ENST00000486148 RPRD2Q5VT52 1461 aaKnown RBP24.45■■□□□ 1.5
TNXB-205ENST00000486148 TROQ12816 1431 aaPredicted RBP24.42■■□□□ 1.5
TNXB-205ENST00000486148 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
TNXB-205ENST00000486148 PLB1Q6P1J6 1458 aa24.42■■□□□ 1.5
TNXB-205ENST00000486148 TEX14Q8IWB6 1497 aa24.42■■□□□ 1.5
TNXB-205ENST00000486148 NBPF8Q3BBV2 869 aa24.41■■□□□ 1.5
TNXB-205ENST00000486148 NEFLP07196 543 aa24.41■■□□□ 1.5
TNXB-205ENST00000486148 C11orf95C9JLR9 678 aaPredicted RBP24.4■■□□□ 1.5
TNXB-205ENST00000486148 SLC4A1APQ9BWU0 796 aaKnown RBP24.4■■□□□ 1.5
TNXB-205ENST00000486148 CAMSAP2Q08AD1 1489 aa24.39■■□□□ 1.5
TNXB-205ENST00000486148 MAGI1Q96QZ7 1491 aaPredicted RBP24.39■■□□□ 1.5
TNXB-205ENST00000486148 CNTLNQ9NXG0 1405 aa24.39■■□□□ 1.49
TNXB-205ENST00000486148 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
TNXB-205ENST00000486148 CFDP1Q9UEE9 299 aaPredicted RBP24.38■■□□□ 1.49
TNXB-205ENST00000486148 NCOA1Q15788 1441 aa24.37■■□□□ 1.49
TNXB-205ENST00000486148 KIF14Q15058 1648 aa24.36■■□□□ 1.49
TNXB-205ENST00000486148 SYNJ2O15056 1496 aa24.36■■□□□ 1.49
TNXB-205ENST00000486148 ERCC6Q03468 1493 aa24.36■■□□□ 1.49
TNXB-205ENST00000486148 HNRNPUQ00839 825 aaKnown RBP eCLIP24.36■■□□□ 1.49
TNXB-205ENST00000486148 GPATCH8Q9UKJ3 1502 aaKnown RBP24.36■■□□□ 1.49
TNXB-205ENST00000486148 CCDC7Q96M83 1385 aa24.35■■□□□ 1.49
TNXB-205ENST00000486148 PZPP20742 1482 aa24.35■■□□□ 1.49
TNXB-205ENST00000486148 ITSN2Q9NZM3 1697 aa24.34■■□□□ 1.49
TNXB-205ENST00000486148 FBLN2P98095 1184 aa24.33■■□□□ 1.49
TNXB-205ENST00000486148 ADCY10Q96PN6 1610 aa24.32■■□□□ 1.48
TNXB-205ENST00000486148 ZNF777Q9ULD5 760 aaPredicted RBP24.31■■□□□ 1.48
TNXB-205ENST00000486148 ADGBQ8N7X0 1667 aa24.31■■□□□ 1.48
TNXB-205ENST00000486148 CCDC184Q52MB2 194 aa24.31■■□□□ 1.48
TNXB-205ENST00000486148 SPATA31E1Q6ZUB1 1445 aa24.29■■□□□ 1.48
TNXB-205ENST00000486148 JPH4Q96JJ6 628 aa24.28■■□□□ 1.48
TNXB-205ENST00000486148 CROCC2H7BZ55 1655 aa24.28■■□□□ 1.48
TNXB-205ENST00000486148 ADGRL2O95490 1459 aa24.27■■□□□ 1.48
TNXB-205ENST00000486148 NUP160Q12769 1436 aa24.27■■□□□ 1.48
TNXB-205ENST00000486148 CARMIL2Q6F5E8 1435 aa24.27■■□□□ 1.48
TNXB-205ENST00000486148 PRKRIP1Q9H875 184 aaPredicted RBP24.26■■□□□ 1.47
TNXB-205ENST00000486148 KIF7Q2M1P5 1343 aa24.24■■□□□ 1.47
TNXB-205ENST00000486148 RBM19Q9Y4C8 960 aaKnown RBP24.24■■□□□ 1.47
TNXB-205ENST00000486148 KIAA1107Q9UPP5 1409 aa24.22■■□□□ 1.47
TNXB-205ENST00000486148 POLR1AO95602 1720 aaPredicted RBP24.21■■□□□ 1.47
TNXB-205ENST00000486148 MBD5Q9P267 1494 aa24.21■■□□□ 1.47
TNXB-205ENST00000486148 ANKRD30AQ9BXX3 1397 aa24.2■■□□□ 1.46
TNXB-205ENST00000486148 PKD2Q13563 968 aa24.18■■□□□ 1.46
TNXB-205ENST00000486148 CDC42BPAQ5VT25 1732 aa24.18■■□□□ 1.46
TNXB-205ENST00000486148 ABCA8O94911 1581 aa24.18■■□□□ 1.46
TNXB-205ENST00000486148 ANKRD50Q9ULJ7 1429 aa24.17■■□□□ 1.46
TNXB-205ENST00000486148 ABCC10Q5T3U5 1492 aa24.16■■□□□ 1.46
TNXB-205ENST00000486148 ATP10BO94823 1461 aa24.16■■□□□ 1.46
TNXB-205ENST00000486148 PLEKHD1A6NEE1 506 aa24.16■■□□□ 1.46
TNXB-205ENST00000486148 MRS2Q9HD23 443 aa24.15■■□□□ 1.46
TNXB-205ENST00000486148 FAM9BQ8IZU0 186 aa24.15■■□□□ 1.46
TNXB-205ENST00000486148 IRX6P78412 446 aaPredicted RBP24.14■■□□□ 1.46
TNXB-205ENST00000486148 PRKCSHP14314 528 aaPredicted RBP24.12■■□□□ 1.45
TNXB-205ENST00000486148 ZNF326Q5BKZ1 582 aaKnown RBP24.12■■□□□ 1.45
TNXB-205ENST00000486148 MSH5O43196 834 aa24.11■■□□□ 1.45
TNXB-205ENST00000486148 C9orf84Q5VXU9 1444 aa24.11■■□□□ 1.45
TNXB-205ENST00000486148 BCORL1Q5H9F3 1711 aa24.1■■□□□ 1.45
TNXB-205ENST00000486148 USP47Q96K76 1375 aa24.1■■□□□ 1.45
TNXB-205ENST00000486148 SHANK2Q9UPX8 1470 aa24.09■■□□□ 1.45
TNXB-205ENST00000486148 NUP155O75694 1391 aa24.08■■□□□ 1.45
TNXB-205ENST00000486148 KDM5CP41229 1560 aa24.05■■□□□ 1.44
TNXB-205ENST00000486148 DHX29Q7Z478 1369 aaKnown RBP24.05■■□□□ 1.44
TNXB-205ENST00000486148 ZBED9Q6R2W3 1325 aa24.03■■□□□ 1.44
TNXB-205ENST00000486148 TSPY4P0CV99 314 aa24.02■■□□□ 1.44
TNXB-205ENST00000486148 TSPY10P0CW01 314 aa24.02■■□□□ 1.44
TNXB-205ENST00000486148 HNRNPMP52272 730 aaKnown RBP eCLIP24.02■■□□□ 1.44
TNXB-205ENST00000486148 POLR3GLQ9BT43 218 aa24.02■■□□□ 1.44
TNXB-205ENST00000486148 UHRF1BP1Q6BDS2 1440 aa24.01■■□□□ 1.43
TNXB-205ENST00000486148 KDM5DQ9BY66 1539 aa24.01■■□□□ 1.43
TNXB-205ENST00000486148 KIF15Q9NS87 1388 aa23.99■■□□□ 1.43
TNXB-205ENST00000486148 CNGB1Q14028 1251 aaPredicted RBP23.99■■□□□ 1.43
TNXB-205ENST00000486148 RALGAPBQ86X10 1494 aa23.98■■□□□ 1.43
TNXB-205ENST00000486148 ARHGEF5Q12774 1597 aa23.97■■□□□ 1.43
TNXB-205ENST00000486148 PTPRGP23470 1445 aa23.96■■□□□ 1.43
TNXB-205ENST00000486148 ARHGEF12Q9NZN5 1544 aa23.96■■□□□ 1.43
TNXB-205ENST00000486148 SAMD9LQ8IVG5 1584 aa23.94■■□□□ 1.42
TNXB-205ENST00000486148 ARID4BQ4LE39 1312 aaPredicted RBP23.94■■□□□ 1.42
TNXB-205ENST00000486148 CARD11Q9BXL7 1154 aa23.94■■□□□ 1.42
TNXB-205ENST00000486148 ERICH6BQ5W0A0 696 aa23.93■■□□□ 1.42
TNXB-205ENST00000486148 CDC42BPBQ9Y5S2 1711 aa23.93■■□□□ 1.42
TNXB-205ENST00000486148 KDM2AQ9Y2K7 1162 aa23.93■■□□□ 1.42
TNXB-205ENST00000486148 CCDC141Q6ZP82 1450 aa23.9■■□□□ 1.42
TNXB-205ENST00000486148 PREX2Q70Z35 1606 aa23.9■■□□□ 1.42
TNXB-205ENST00000486148 PPP4R2Q9NY27 417 aa23.9■■□□□ 1.42
TNXB-205ENST00000486148 DCAF11Q8TEB1 546 aa23.88■■□□□ 1.41
TNXB-205ENST00000486148 FAM135AQ9P2D6 1515 aa23.87■■□□□ 1.41
TNXB-205ENST00000486148 ST20-MTHFSA0A0A6YYL1 179 aa23.86■■□□□ 1.41
TNXB-205ENST00000486148 ROCK2O75116 1388 aaKnown RBP23.86■■□□□ 1.41
TNXB-205ENST00000486148 SYCP2Q9BX26 1530 aa23.82■■□□□ 1.4
TNXB-205ENST00000486148 FANCIQ9NVI1 1328 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms