RNA–Protein interactions for RNA: ENST00000485556.5

STRC-211, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 4,253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-211ENST00000485556 SAFB2Q14151 953 aaKnown RBP eCLIP13.17□□□□□ -0.3
STRC-211ENST00000485556 ZBTB7CA1YPR0 619 aa13.16□□□□□ -0.3
STRC-211ENST00000485556 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
STRC-211ENST00000485556 TOP2BQ02880 1626 aa13.16□□□□□ -0.3
STRC-211ENST00000485556 ROCK2O75116 1388 aaKnown RBP13.15□□□□□ -0.3
STRC-211ENST00000485556 UPF2Q9HAU5 1272 aaKnown RBP13.15□□□□□ -0.3
STRC-211ENST00000485556 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
STRC-211ENST00000485556 ZNF644Q9H582 1327 aaPredicted RBP13.15□□□□□ -0.3
STRC-211ENST00000485556 TOPBP1Q92547 1522 aa13.14□□□□□ -0.31
STRC-211ENST00000485556 LRRC9Q6ZRR7 1453 aa13.14□□□□□ -0.31
STRC-211ENST00000485556 FGD6Q6ZV73 1430 aa13.14□□□□□ -0.31
STRC-211ENST00000485556 POLA1P09884 1462 aaPredicted RBP13.14□□□□□ -0.31
STRC-211ENST00000485556 DNAJC5BQ9UF47 199 aa13.13□□□□□ -0.31
STRC-211ENST00000485556 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
STRC-211ENST00000485556 SRPK2P78362 688 aaKnown RBP13.12□□□□□ -0.31
STRC-211ENST00000485556 STK26Q9P289 416 aa13.12□□□□□ -0.31
STRC-211ENST00000485556 MYOM3Q5VTT5 1437 aa13.11□□□□□ -0.31
STRC-211ENST00000485556 CASKIN1Q8WXD9 1431 aa13.11□□□□□ -0.31
STRC-211ENST00000485556 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
STRC-211ENST00000485556 U2SURPO15042 1029 aaKnown RBP13.1□□□□□ -0.31
STRC-211ENST00000485556 MAPK8IP3Q9UPT6 1336 aa13.1□□□□□ -0.31
STRC-211ENST00000485556 HSP90AA1P07900 732 aaKnown RBP13.09□□□□□ -0.31
STRC-211ENST00000485556 EIF5BO60841 1220 aaKnown RBP13.07□□□□□ -0.32
STRC-211ENST00000485556 WASHC2CQ9Y4E1 1318 aa13.07□□□□□ -0.32
STRC-211ENST00000485556 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
STRC-211ENST00000485556 MORC1Q86VD1 984 aa13.06□□□□□ -0.32
STRC-211ENST00000485556 PPP4R2Q9NY27 417 aa13.06□□□□□ -0.32
STRC-211ENST00000485556 NCOA2Q15596 1464 aa13.06□□□□□ -0.32
STRC-211ENST00000485556 MRC2Q9UBG0 1479 aa13.06□□□□□ -0.32
STRC-211ENST00000485556 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
STRC-211ENST00000485556 CYB5RLQ6IPT4 315 aa13.05□□□□□ -0.32
STRC-211ENST00000485556 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
STRC-211ENST00000485556 B4GALNT3Q6L9W6 998 aa13.05□□□□□ -0.32
STRC-211ENST00000485556 ST20-MTHFSA0A0A6YYL1 179 aa13.05□□□□□ -0.32
STRC-211ENST00000485556 CCDC144AA2RUR9 1427 aa13.05□□□□□ -0.32
STRC-211ENST00000485556 HDGFP51858 240 aaKnown RBP13.05□□□□□ -0.32
STRC-211ENST00000485556 LMOD2Q6P5Q4 547 aa13.05□□□□□ -0.32
STRC-211ENST00000485556 MYH16Q9H6N6 1097 aa13.04□□□□□ -0.32
STRC-211ENST00000485556 NUTM2DQ5VT03 806 aaPredicted RBP13.04□□□□□ -0.32
STRC-211ENST00000485556 FRAT1Q92837 279 aaPredicted RBP13.04□□□□□ -0.32
STRC-211ENST00000485556 FYCO1Q9BQS8 1478 aa13.03□□□□□ -0.32
STRC-211ENST00000485556 SOX12O15370 315 aa13.03□□□□□ -0.32
STRC-211ENST00000485556 FTSJ3Q8IY81 847 aaKnown RBP13.02□□□□□ -0.32
STRC-211ENST00000485556 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.33
STRC-211ENST00000485556 PRDM2Q13029 1718 aa13.01□□□□□ -0.33
STRC-211ENST00000485556 RALBP1Q15311 655 aa13.01□□□□□ -0.33
STRC-211ENST00000485556 RRBP1Q9P2E9 1410 aaKnown RBP13.01□□□□□ -0.33
STRC-211ENST00000485556 A0A0G2JS52 829 aa13.01□□□□□ -0.33
STRC-211ENST00000485556 NBR1Q14596 966 aa13.01□□□□□ -0.33
STRC-211ENST00000485556 UACAQ9BZF9 1416 aa13.01□□□□□ -0.33
STRC-211ENST00000485556 IFT140Q96RY7 1462 aa13.01□□□□□ -0.33
STRC-211ENST00000485556 KIF15Q9NS87 1388 aa13□□□□□ -0.33
STRC-211ENST00000485556 PEG3Q9GZU2 1588 aa12.99□□□□□ -0.33
STRC-211ENST00000485556 EFCAB5A4FU69 1503 aa12.98□□□□□ -0.33
STRC-211ENST00000485556 TRAK1Q9UPV9 953 aa12.98□□□□□ -0.33
STRC-211ENST00000485556 HAP1P54257 671 aaPredicted RBP12.97□□□□□ -0.33
STRC-211ENST00000485556 PRG4Q92954 1404 aaPredicted RBP12.97□□□□□ -0.33
STRC-211ENST00000485556 RGS3P49796 1198 aa12.97□□□□□ -0.33
STRC-211ENST00000485556 EIF3AQ14152 1382 aaKnown RBP12.97□□□□□ -0.33
STRC-211ENST00000485556 USP47Q96K76 1375 aa12.96□□□□□ -0.33
STRC-211ENST00000485556 HDGFL2Q7Z4V5 671 aaPredicted RBP12.96□□□□□ -0.33
STRC-211ENST00000485556 NLRP13Q86W25 1043 aa12.96□□□□□ -0.33
STRC-211ENST00000485556 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.33
STRC-211ENST00000485556 ANKRD50Q9ULJ7 1429 aa12.96□□□□□ -0.33
STRC-211ENST00000485556 ABCA10Q8WWZ4 1543 aa12.96□□□□□ -0.33
STRC-211ENST00000485556 SNAPC4Q5SXM2 1469 aa12.96□□□□□ -0.33
STRC-211ENST00000485556 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
STRC-211ENST00000485556 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.34
STRC-211ENST00000485556 PRKRIP1Q9H875 184 aaPredicted RBP12.94□□□□□ -0.34
STRC-211ENST00000485556 AFAP1Q8N556 730 aa12.93□□□□□ -0.34
STRC-211ENST00000485556 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
STRC-211ENST00000485556 TIAM1Q13009 1591 aa12.93□□□□□ -0.34
STRC-211ENST00000485556 PANK3Q9H999 370 aa12.93□□□□□ -0.34
STRC-211ENST00000485556 SYNJ2O15056 1496 aa12.92□□□□□ -0.34
STRC-211ENST00000485556 LAMC3Q9Y6N6 1575 aa12.91□□□□□ -0.34
STRC-211ENST00000485556 RCAN3Q9UKA8 241 aa12.91□□□□□ -0.34
STRC-211ENST00000485556 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
STRC-211ENST00000485556 TERF2IPQ9NYB0 399 aa12.89□□□□□ -0.35
STRC-211ENST00000485556 EHBP1L1Q8N3D4 1523 aa12.88□□□□□ -0.35
STRC-211ENST00000485556 VGFO15240 615 aaPredicted RBP12.88□□□□□ -0.35
STRC-211ENST00000485556 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
STRC-211ENST00000485556 MS4A1P11836 297 aa12.87□□□□□ -0.35
STRC-211ENST00000485556 KIAA0586Q9BVV6 1533 aa12.87□□□□□ -0.35
STRC-211ENST00000485556 MYBBP1AQ9BQG0 1328 aaKnown RBP12.87□□□□□ -0.35
STRC-211ENST00000485556 FAM69CQ0P6D2 419 aa12.87□□□□□ -0.35
STRC-211ENST00000485556 DDRGK1Q96HY6 314 aa12.87□□□□□ -0.35
STRC-211ENST00000485556 NUTM2FA1L443 756 aa12.87□□□□□ -0.35
STRC-211ENST00000485556 MIA2Q96PC5 1412 aa12.86□□□□□ -0.35
STRC-211ENST00000485556 ARHGAP5Q13017 1502 aa12.86□□□□□ -0.35
STRC-211ENST00000485556 ARXQ96QS3 562 aa12.86□□□□□ -0.35
STRC-211ENST00000485556 KIF7Q2M1P5 1343 aa12.86□□□□□ -0.35
STRC-211ENST00000485556 PAK3O75914 559 aaPredicted RBP12.85□□□□□ -0.35
STRC-211ENST00000485556 BECN1Q14457 450 aa12.85□□□□□ -0.35
STRC-211ENST00000485556 URB2Q14146 1524 aaKnown RBP12.85□□□□□ -0.35
STRC-211ENST00000485556 HFM1A2PYH4 1435 aa12.85□□□□□ -0.35
STRC-211ENST00000485556 CDK13Q14004 1512 aaKnown RBP12.85□□□□□ -0.35
STRC-211ENST00000485556 EID1Q9Y6B2 187 aa12.85□□□□□ -0.35
STRC-211ENST00000485556 CCDC7Q96M83 1385 aa12.84□□□□□ -0.35
STRC-211ENST00000485556 EPRSP07814 1512 aaKnown RBP12.84□□□□□ -0.35
STRC-211ENST00000485556 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms