RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 CFAP74Q9C0B2 1584 aa11.16□□□□□ -0.62
CAPN13-206ENST00000485248 GOLGA3Q08378 1498 aa11.15□□□□□ -0.62
CAPN13-206ENST00000485248 ABCA8O94911 1581 aa11.14□□□□□ -0.63
CAPN13-206ENST00000485248 RICTORQ6R327 1708 aa11.14□□□□□ -0.63
CAPN13-206ENST00000485248 ARID3CA6NKF2 412 aa11.13□□□□□ -0.63
CAPN13-206ENST00000485248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
CAPN13-206ENST00000485248 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
CAPN13-206ENST00000485248 PIP4K2BP78356 416 aa11.12□□□□□ -0.63
CAPN13-206ENST00000485248 HSPA1LP34931 641 aa11.11□□□□□ -0.63
CAPN13-206ENST00000485248 CEBPAP49715 358 aaPredicted RBP11.11□□□□□ -0.63
CAPN13-206ENST00000485248 ESF1Q9H501 851 aaKnown RBP11.11□□□□□ -0.63
CAPN13-206ENST00000485248 SETD1BQ9UPS6 1966 aaKnown RBP11.1□□□□□ -0.63
CAPN13-206ENST00000485248 MAGI2Q86UL8 1455 aa11.1□□□□□ -0.63
CAPN13-206ENST00000485248 ZMYM4Q5VZL5 1548 aa11.09□□□□□ -0.63
CAPN13-206ENST00000485248 ARHGEF12Q9NZN5 1544 aa11.09□□□□□ -0.63
CAPN13-206ENST00000485248 TOM1O60784 492 aa11.09□□□□□ -0.63
CAPN13-206ENST00000485248 FHOD3Q2V2M9 1422 aa11.08□□□□□ -0.64
CAPN13-206ENST00000485248 CTTNBP2Q8WZ74 1663 aa11.08□□□□□ -0.64
CAPN13-206ENST00000485248 SIGLEC1Q9BZZ2 1709 aa11.06□□□□□ -0.64
CAPN13-206ENST00000485248 NCOA1Q15788 1441 aa11.06□□□□□ -0.64
CAPN13-206ENST00000485248 C9orf84Q5VXU9 1444 aa11.06□□□□□ -0.64
CAPN13-206ENST00000485248 RAPGEF2Q9Y4G8 1499 aa11.06□□□□□ -0.64
CAPN13-206ENST00000485248 NPM3O75607 178 aaKnown RBP11.05□□□□□ -0.64
CAPN13-206ENST00000485248 ZNF335Q9H4Z2 1342 aaPredicted RBP11.05□□□□□ -0.64
CAPN13-206ENST00000485248 HECW1Q76N89 1606 aa11.03□□□□□ -0.64
CAPN13-206ENST00000485248 MYT1LQ9UL68 1186 aa11.03□□□□□ -0.64
CAPN13-206ENST00000485248 ATP10BO94823 1461 aa11.03□□□□□ -0.64
CAPN13-206ENST00000485248 CAMSAP1Q5T5Y3 1602 aa11.02□□□□□ -0.64
CAPN13-206ENST00000485248 ATP10AO60312 1499 aa11.02□□□□□ -0.65
CAPN13-206ENST00000485248 C3P01024 1663 aa11.01□□□□□ -0.65
CAPN13-206ENST00000485248 SUPT6HQ7KZ85 1726 aaKnown RBP11.01□□□□□ -0.65
CAPN13-206ENST00000485248 SLC24A1O60721 1099 aa11.01□□□□□ -0.65
CAPN13-206ENST00000485248 TRAPPC8Q9Y2L5 1435 aa11.01□□□□□ -0.65
CAPN13-206ENST00000485248 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
CAPN13-206ENST00000485248 ZBTB22O15209 634 aa10.99□□□□□ -0.65
CAPN13-206ENST00000485248 PIAS4Q8N2W9 510 aaPredicted RBP10.99□□□□□ -0.65
CAPN13-206ENST00000485248 PKD2Q13563 968 aa10.98□□□□□ -0.65
CAPN13-206ENST00000485248 NCKAP5LQ9HCH0 1330 aa10.97□□□□□ -0.65
CAPN13-206ENST00000485248 PTPRKQ15262 1439 aa10.97□□□□□ -0.65
CAPN13-206ENST00000485248 RAPGEF6Q8TEU7 1601 aa10.95□□□□□ -0.66
CAPN13-206ENST00000485248 CPS1P31327 1500 aa10.95□□□□□ -0.66
CAPN13-206ENST00000485248 PLEKHD1A6NEE1 506 aa10.95□□□□□ -0.66
CAPN13-206ENST00000485248 SCAPERQ9BY12 1400 aa10.94□□□□□ -0.66
CAPN13-206ENST00000485248 CNTLNQ9NXG0 1405 aa10.92□□□□□ -0.66
CAPN13-206ENST00000485248 PLA2R1Q13018 1463 aa10.92□□□□□ -0.66
CAPN13-206ENST00000485248 P3H3Q8IVL6 736 aa10.91□□□□□ -0.66
CAPN13-206ENST00000485248 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.9□□□□□ -0.66
CAPN13-206ENST00000485248 NPATQ14207 1427 aa10.9□□□□□ -0.66
CAPN13-206ENST00000485248 SETD1AO15047 1707 aaKnown RBP10.89□□□□□ -0.67
CAPN13-206ENST00000485248 ZNF518AQ6AHZ1 1483 aa10.89□□□□□ -0.67
CAPN13-206ENST00000485248 ZNF142P52746 1687 aaPredicted RBP10.89□□□□□ -0.67
CAPN13-206ENST00000485248 MYO3AQ8NEV4 1616 aa10.87□□□□□ -0.67
CAPN13-206ENST00000485248 AGLP35573 1532 aa10.87□□□□□ -0.67
CAPN13-206ENST00000485248 REREQ9P2R6 1566 aa10.86□□□□□ -0.67
CAPN13-206ENST00000485248 CEP170BQ9Y4F5 1589 aaPredicted RBP10.86□□□□□ -0.67
CAPN13-206ENST00000485248 MROH2AA6NES4 1674 aa10.86□□□□□ -0.67
CAPN13-206ENST00000485248 RGS17Q9UGC6 210 aaPredicted RBP10.85□□□□□ -0.67
CAPN13-206ENST00000485248 TCOF1Q13428 1488 aaKnown RBP10.85□□□□□ -0.67
CAPN13-206ENST00000485248 SHANK2Q9UPX8 1470 aa10.85□□□□□ -0.67
CAPN13-206ENST00000485248 DIP2CQ9Y2E4 1556 aa10.85□□□□□ -0.67
CAPN13-206ENST00000485248 MYO5CQ9NQX4 1742 aa10.84□□□□□ -0.67
CAPN13-206ENST00000485248 EFCAB2Q5VUJ9 269 aa10.84□□□□□ -0.67
CAPN13-206ENST00000485248 POLR1AO95602 1720 aaPredicted RBP10.84□□□□□ -0.67
CAPN13-206ENST00000485248 PLCH2O75038 1416 aa10.83□□□□□ -0.68
CAPN13-206ENST00000485248 NUP153P49790 1475 aaKnown RBP10.82□□□□□ -0.68
CAPN13-206ENST00000485248 POTEAQ6S8J7 498 aa10.82□□□□□ -0.68
CAPN13-206ENST00000485248 RTN4Q9NQC3 1192 aaKnown RBP10.82□□□□□ -0.68
CAPN13-206ENST00000485248 RNF17Q9BXT8 1623 aaKnown RBP10.82□□□□□ -0.68
CAPN13-206ENST00000485248 KDM5CP41229 1560 aa10.81□□□□□ -0.68
CAPN13-206ENST00000485248 ABCA6Q8N139 1617 aa10.8□□□□□ -0.68
CAPN13-206ENST00000485248 ZMYM3Q14202 1370 aa10.79□□□□□ -0.68
CAPN13-206ENST00000485248 ARHGAP5Q13017 1502 aa10.79□□□□□ -0.68
CAPN13-206ENST00000485248 AMER1Q5JTC6 1135 aaPredicted RBP10.78□□□□□ -0.68
CAPN13-206ENST00000485248 CNKSR2Q8WXI2 1034 aa10.78□□□□□ -0.68
CAPN13-206ENST00000485248 UPF1Q92900 1129 aaKnown RBP eCLIP10.78□□□□□ -0.68
CAPN13-206ENST00000485248 SAMD9Q5K651 1589 aa10.77□□□□□ -0.68
CAPN13-206ENST00000485248 AFAP1Q8N556 730 aa10.77□□□□□ -0.69
CAPN13-206ENST00000485248 SYNMO15061 1565 aa10.77□□□□□ -0.69
CAPN13-206ENST00000485248 CLTCQ00610 1675 aaKnown RBP10.76□□□□□ -0.69
CAPN13-206ENST00000485248 A2ML1A8K2U0 1454 aa10.74□□□□□ -0.69
CAPN13-206ENST00000485248 MLH3Q9UHC1 1453 aa10.74□□□□□ -0.69
CAPN13-206ENST00000485248 ALKQ9UM73 1620 aa10.73□□□□□ -0.69
CAPN13-206ENST00000485248 ANKLE2Q86XL3 938 aa10.73□□□□□ -0.69
CAPN13-206ENST00000485248 TRIM52Q96A61 297 aa10.73□□□□□ -0.69
CAPN13-206ENST00000485248 DNMT1P26358 1616 aaKnown RBP10.73□□□□□ -0.69
CAPN13-206ENST00000485248 KIF14Q15058 1648 aa10.73□□□□□ -0.69
CAPN13-206ENST00000485248 RANGAP1P46060 587 aaPredicted RBP10.72□□□□□ -0.69
CAPN13-206ENST00000485248 VWDEQ8N2E2 1590 aa10.72□□□□□ -0.69
CAPN13-206ENST00000485248 MEX3CQ5U5Q3 659 aaKnown RBP10.71□□□□□ -0.69
CAPN13-206ENST00000485248 NEURL4Q96JN8 1562 aa10.71□□□□□ -0.69
CAPN13-206ENST00000485248 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.69
CAPN13-206ENST00000485248 CDK11AQ9UQ88 783 aaPredicted RBP10.71□□□□□ -0.69
CAPN13-206ENST00000485248 LRRC7Q96NW7 1537 aa10.69□□□□□ -0.7
CAPN13-206ENST00000485248 NPHP4O75161 1426 aaPredicted RBP10.69□□□□□ -0.7
CAPN13-206ENST00000485248 ZNF772Q68DY9 489 aaPredicted RBP10.69□□□□□ -0.7
CAPN13-206ENST00000485248 IQGAP1P46940 1657 aa10.69□□□□□ -0.7
CAPN13-206ENST00000485248 ITSN2Q9NZM3 1697 aa10.69□□□□□ -0.7
CAPN13-206ENST00000485248 CDK13Q14004 1512 aaKnown RBP10.68□□□□□ -0.7
CAPN13-206ENST00000485248 CLIP1P30622 1438 aa10.68□□□□□ -0.7
CAPN13-206ENST00000485248 ATP1B4Q9UN42 357 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms