RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 FAM9AQ8IZU1 332 aaPredicted RBP16.96■□□□□ 0.31
TRUB1-202ENST00000485065 ATP10BO94823 1461 aa16.96■□□□□ 0.31
TRUB1-202ENST00000485065 RIMS1Q86UR5 1692 aaKnown RBP16.95■□□□□ 0.3
TRUB1-202ENST00000485065 FRMPD1Q5SYB0 1578 aa16.95■□□□□ 0.3
TRUB1-202ENST00000485065 CTTNBP2Q8WZ74 1663 aa16.94■□□□□ 0.3
TRUB1-202ENST00000485065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.93■□□□□ 0.3
TRUB1-202ENST00000485065 HNRNPUL2Q1KMD3 747 aaKnown RBP16.93■□□□□ 0.3
TRUB1-202ENST00000485065 POGZQ7Z3K3 1410 aa16.93■□□□□ 0.3
TRUB1-202ENST00000485065 ARHGEF40Q8TER5 1519 aa16.92■□□□□ 0.3
TRUB1-202ENST00000485065 FHOD3Q2V2M9 1422 aa16.88■□□□□ 0.29
TRUB1-202ENST00000485065 FANCAO15360 1455 aa16.88■□□□□ 0.29
TRUB1-202ENST00000485065 DENND4BO75064 1496 aaPredicted RBP16.87■□□□□ 0.29
TRUB1-202ENST00000485065 AKNAQ7Z591 1439 aa16.87■□□□□ 0.29
TRUB1-202ENST00000485065 YEATS2Q9ULM3 1422 aa16.87■□□□□ 0.29
TRUB1-202ENST00000485065 SPATA31D1Q6ZQQ2 1576 aa16.86■□□□□ 0.29
TRUB1-202ENST00000485065 SAMD1Q6SPF0 538 aaPredicted RBP16.85■□□□□ 0.29
TRUB1-202ENST00000485065 RICTORQ6R327 1708 aa16.84■□□□□ 0.29
TRUB1-202ENST00000485065 ARID3CA6NKF2 412 aa16.83■□□□□ 0.28
TRUB1-202ENST00000485065 TTC37Q6PGP7 1564 aa16.83■□□□□ 0.28
TRUB1-202ENST00000485065 MAGI2Q86UL8 1455 aa16.83■□□□□ 0.28
TRUB1-202ENST00000485065 ZMYM4Q5VZL5 1548 aa16.82■□□□□ 0.28
TRUB1-202ENST00000485065 EFCAB5A4FU69 1503 aa16.8■□□□□ 0.28
TRUB1-202ENST00000485065 ZFYVE16Q7Z3T8 1539 aa16.78■□□□□ 0.28
TRUB1-202ENST00000485065 SETD1BQ9UPS6 1966 aaKnown RBP16.78■□□□□ 0.28
TRUB1-202ENST00000485065 PRXQ9BXM0 1461 aa16.78■□□□□ 0.28
TRUB1-202ENST00000485065 PREX1Q8TCU6 1659 aa16.78■□□□□ 0.28
TRUB1-202ENST00000485065 CFAP74Q9C0B2 1584 aa16.77■□□□□ 0.28
TRUB1-202ENST00000485065 FER1L4A9Z1Z3 1794 aa16.77■□□□□ 0.28
TRUB1-202ENST00000485065 STRCQ7RTU9 1775 aa16.77■□□□□ 0.27
TRUB1-202ENST00000485065 SIGLEC1Q9BZZ2 1709 aa16.76■□□□□ 0.27
TRUB1-202ENST00000485065 IQSEC2Q5JU85 1478 aa16.75■□□□□ 0.27
TRUB1-202ENST00000485065 RAPGEF6Q8TEU7 1601 aa16.75■□□□□ 0.27
TRUB1-202ENST00000485065 PTPRTO14522 1441 aa16.75■□□□□ 0.27
TRUB1-202ENST00000485065 ARHGEF12Q9NZN5 1544 aa16.75■□□□□ 0.27
TRUB1-202ENST00000485065 P3H3Q8IVL6 736 aa16.74■□□□□ 0.27
TRUB1-202ENST00000485065 PLEKHD1A6NEE1 506 aa16.73■□□□□ 0.27
TRUB1-202ENST00000485065 MLECQ14165 292 aa16.73■□□□□ 0.27
TRUB1-202ENST00000485065 NUP153P49790 1475 aaKnown RBP16.71■□□□□ 0.27
TRUB1-202ENST00000485065 UHRF1BP1Q6BDS2 1440 aa16.7■□□□□ 0.26
TRUB1-202ENST00000485065 SAMD9Q5K651 1589 aa16.69■□□□□ 0.26
TRUB1-202ENST00000485065 ATP10AO60312 1499 aa16.69■□□□□ 0.26
TRUB1-202ENST00000485065 HECW1Q76N89 1606 aa16.69■□□□□ 0.26
TRUB1-202ENST00000485065 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRUB1-202ENST00000485065 LTBP4Q8N2S1 1624 aa16.67■□□□□ 0.26
TRUB1-202ENST00000485065 CEBPAP49715 358 aaPredicted RBP16.67■□□□□ 0.26
TRUB1-202ENST00000485065 C9orf84Q5VXU9 1444 aa16.67■□□□□ 0.26
TRUB1-202ENST00000485065 SCAPERQ9BY12 1400 aa16.64■□□□□ 0.25
TRUB1-202ENST00000485065 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
TRUB1-202ENST00000485065 RBM42Q9BTD8 480 aaKnown RBP16.62■□□□□ 0.25
TRUB1-202ENST00000485065 PLCH2O75038 1416 aa16.62■□□□□ 0.25
TRUB1-202ENST00000485065 NCOA1Q15788 1441 aa16.57■□□□□ 0.24
TRUB1-202ENST00000485065 TRAPPC8Q9Y2L5 1435 aa16.57■□□□□ 0.24
TRUB1-202ENST00000485065 POLA2Q14181 598 aa16.56■□□□□ 0.24
TRUB1-202ENST00000485065 EFCAB2Q5VUJ9 269 aa16.56■□□□□ 0.24
TRUB1-202ENST00000485065 REREQ9P2R6 1566 aa16.54■□□□□ 0.24
TRUB1-202ENST00000485065 ZNF518AQ6AHZ1 1483 aa16.53■□□□□ 0.24
TRUB1-202ENST00000485065 UBAP1LF5GYI3 381 aa16.52■□□□□ 0.24
TRUB1-202ENST00000485065 C3P01024 1663 aa16.52■□□□□ 0.23
TRUB1-202ENST00000485065 KDM5CP41229 1560 aa16.51■□□□□ 0.23
TRUB1-202ENST00000485065 AGLP35573 1532 aa16.5■□□□□ 0.23
TRUB1-202ENST00000485065 ESF1Q9H501 851 aaKnown RBP16.49■□□□□ 0.23
TRUB1-202ENST00000485065 CNTLNQ9NXG0 1405 aa16.48■□□□□ 0.23
TRUB1-202ENST00000485065 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
TRUB1-202ENST00000485065 AFAP1Q8N556 730 aa16.47■□□□□ 0.23
TRUB1-202ENST00000485065 NPATQ14207 1427 aa16.46■□□□□ 0.23
TRUB1-202ENST00000485065 MLH3Q9UHC1 1453 aa16.46■□□□□ 0.23
TRUB1-202ENST00000485065 DIP2CQ9Y2E4 1556 aa16.46■□□□□ 0.23
TRUB1-202ENST00000485065 MYO5CQ9NQX4 1742 aa16.45■□□□□ 0.22
TRUB1-202ENST00000485065 CAMSAP1Q5T5Y3 1602 aa16.45■□□□□ 0.22
TRUB1-202ENST00000485065 ZNF335Q9H4Z2 1342 aaPredicted RBP16.45■□□□□ 0.22
TRUB1-202ENST00000485065 PKD2Q13563 968 aa16.44■□□□□ 0.22
TRUB1-202ENST00000485065 CHRDL2Q6WN34 429 aa16.44■□□□□ 0.22
TRUB1-202ENST00000485065 CDK13Q14004 1512 aaKnown RBP16.43■□□□□ 0.22
TRUB1-202ENST00000485065 CDK11AQ9UQ88 783 aaPredicted RBP16.42■□□□□ 0.22
TRUB1-202ENST00000485065 MED1Q15648 1581 aaPredicted RBP16.42■□□□□ 0.22
TRUB1-202ENST00000485065 PLA2R1Q13018 1463 aa16.42■□□□□ 0.22
TRUB1-202ENST00000485065 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
TRUB1-202ENST00000485065 NCKAP5LQ9HCH0 1330 aa16.4■□□□□ 0.22
TRUB1-202ENST00000485065 ABCA6Q8N139 1617 aa16.39■□□□□ 0.21
TRUB1-202ENST00000485065 HSPA1LP34931 641 aa16.38■□□□□ 0.21
TRUB1-202ENST00000485065 RANGAP1P46060 587 aaPredicted RBP16.38■□□□□ 0.21
TRUB1-202ENST00000485065 MROH2AA6NES4 1674 aa16.37■□□□□ 0.21
TRUB1-202ENST00000485065 TCOF1Q13428 1488 aaKnown RBP16.37■□□□□ 0.21
TRUB1-202ENST00000485065 ARHGAP5Q13017 1502 aa16.37■□□□□ 0.21
TRUB1-202ENST00000485065 ATF5Q9Y2D1 282 aaPredicted RBP16.37■□□□□ 0.21
TRUB1-202ENST00000485065 ZMYM3Q14202 1370 aa16.37■□□□□ 0.21
TRUB1-202ENST00000485065 TOM1O60784 492 aa16.36■□□□□ 0.21
TRUB1-202ENST00000485065 TROQ12816 1431 aaPredicted RBP16.34■□□□□ 0.21
TRUB1-202ENST00000485065 KIF14Q15058 1648 aa16.34■□□□□ 0.21
TRUB1-202ENST00000485065 EEA1Q15075 1411 aa16.33■□□□□ 0.2
TRUB1-202ENST00000485065 ZNF142P52746 1687 aaPredicted RBP16.33■□□□□ 0.2
TRUB1-202ENST00000485065 FMN1Q68DA7 1419 aa16.31■□□□□ 0.2
TRUB1-202ENST00000485065 CLIP1P30622 1438 aa16.3■□□□□ 0.2
TRUB1-202ENST00000485065 KIDINS220Q9ULH0 1771 aa16.3■□□□□ 0.2
TRUB1-202ENST00000485065 CPS1P31327 1500 aa16.29■□□□□ 0.2
TRUB1-202ENST00000485065 PIP4K2BP78356 416 aa16.29■□□□□ 0.2
TRUB1-202ENST00000485065 ABCC1P33527 1531 aa16.29■□□□□ 0.2
TRUB1-202ENST00000485065 CDC42BPBQ9Y5S2 1711 aa16.28■□□□□ 0.2
TRUB1-202ENST00000485065 CEP170BQ9Y4F5 1589 aaPredicted RBP16.28■□□□□ 0.2
TRUB1-202ENST00000485065 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms