RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
RXRA-203ENST00000484822 FHOD3Q2V2M9 1422 aa19.47■□□□□ 0.71
RXRA-203ENST00000484822 ZBTB7CA1YPR0 619 aa19.46■□□□□ 0.71
RXRA-203ENST00000484822 ARID3AQ99856 593 aa19.45■□□□□ 0.7
RXRA-203ENST00000484822 FGD5Q6ZNL6 1462 aa19.43■□□□□ 0.7
RXRA-203ENST00000484822 PNNQ9H307 717 aaKnown RBP19.43■□□□□ 0.7
RXRA-203ENST00000484822 CFAP53Q96M91 514 aa19.42■□□□□ 0.7
RXRA-203ENST00000484822 HSCBQ8IWL3 235 aa19.41■□□□□ 0.7
RXRA-203ENST00000484822 CCDC18Q5T9S5 1454 aa19.4■□□□□ 0.7
RXRA-203ENST00000484822 GZF1Q9H116 711 aaPredicted RBP19.39■□□□□ 0.7
RXRA-203ENST00000484822 CCER2I3L3R5 266 aa19.39■□□□□ 0.69
RXRA-203ENST00000484822 CHAF1AQ13111 956 aaPredicted RBP19.39■□□□□ 0.69
RXRA-203ENST00000484822 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
RXRA-203ENST00000484822 RUSC2Q8N2Y8 1516 aa19.39■□□□□ 0.69
RXRA-203ENST00000484822 ANKRD30AQ9BXX3 1397 aa19.38■□□□□ 0.69
RXRA-203ENST00000484822 CC2D1BQ5T0F9 858 aaKnown RBP19.37■□□□□ 0.69
RXRA-203ENST00000484822 RSPH4AQ5TD94 716 aa19.37■□□□□ 0.69
RXRA-203ENST00000484822 SLKQ9H2G2 1235 aaPredicted RBP19.36■□□□□ 0.69
RXRA-203ENST00000484822 IGF1RP08069 1367 aa19.35■□□□□ 0.69
RXRA-203ENST00000484822 POGKQ9P215 609 aa19.34■□□□□ 0.69
RXRA-203ENST00000484822 DCAF11Q8TEB1 546 aa19.34■□□□□ 0.69
RXRA-203ENST00000484822 PKD2Q13563 968 aa19.32■□□□□ 0.68
RXRA-203ENST00000484822 TAOK2Q9UL54 1235 aa19.32■□□□□ 0.68
RXRA-203ENST00000484822 GGT6Q6P531 493 aa19.32■□□□□ 0.68
RXRA-203ENST00000484822 PLEKHG5O94827 1062 aa19.31■□□□□ 0.68
RXRA-203ENST00000484822 IPO9Q96P70 1041 aaKnown RBP19.31■□□□□ 0.68
RXRA-203ENST00000484822 RAD54L2Q9Y4B4 1467 aa19.31■□□□□ 0.68
RXRA-203ENST00000484822 CFTRP13569 1480 aa19.3■□□□□ 0.68
RXRA-203ENST00000484822 PTPRGP23470 1445 aa19.3■□□□□ 0.68
RXRA-203ENST00000484822 MLECQ14165 292 aa19.3■□□□□ 0.68
RXRA-203ENST00000484822 GOLGA6L6A8MZA4 724 aa19.3■□□□□ 0.68
RXRA-203ENST00000484822 MAPK8IP3Q9UPT6 1336 aa19.3■□□□□ 0.68
RXRA-203ENST00000484822 HMGXB3Q12766 1538 aa19.29■□□□□ 0.68
RXRA-203ENST00000484822 NRDCO43847 1150 aa19.28■□□□□ 0.68
RXRA-203ENST00000484822 RAB3GAP2Q9H2M9 1393 aa19.28■□□□□ 0.68
RXRA-203ENST00000484822 NUP155O75694 1391 aa19.27■□□□□ 0.68
RXRA-203ENST00000484822 GOLGA6L4A6NEF3 574 aa19.26■□□□□ 0.67
RXRA-203ENST00000484822 TCERG1O14776 1098 aaKnown RBP19.25■□□□□ 0.67
RXRA-203ENST00000484822 TMF1P82094 1093 aa19.25■□□□□ 0.67
RXRA-203ENST00000484822 MPHOSPH9Q99550 1183 aa19.25■□□□□ 0.67
RXRA-203ENST00000484822 OSCARQ8IYS5 282 aa19.25■□□□□ 0.67
RXRA-203ENST00000484822 LMOD2Q6P5Q4 547 aa19.24■□□□□ 0.67
RXRA-203ENST00000484822 DRC7Q8IY82 874 aa19.24■□□□□ 0.67
RXRA-203ENST00000484822 CC2D2AQ9P2K1 1620 aa19.23■□□□□ 0.67
RXRA-203ENST00000484822 SPAG9O60271 1321 aaKnown RBP19.23■□□□□ 0.67
RXRA-203ENST00000484822 MS4A1P11836 297 aa19.23■□□□□ 0.67
RXRA-203ENST00000484822 HNRNPMP52272 730 aaKnown RBP eCLIP19.23■□□□□ 0.673e-6■■■■□ 24.7
RXRA-203ENST00000484822 FGD1P98174 961 aa19.22■□□□□ 0.67
RXRA-203ENST00000484822 GOLGA6L3A6NEY3 463 aa19.22■□□□□ 0.67
RXRA-203ENST00000484822 NUDCQ9Y266 331 aa19.22■□□□□ 0.67
RXRA-203ENST00000484822 NPHP1O15259 732 aa19.21■□□□□ 0.67
RXRA-203ENST00000484822 KCNJ4P48050 445 aa19.21■□□□□ 0.67
RXRA-203ENST00000484822 GBP4Q96PP9 640 aa19.2■□□□□ 0.66
RXRA-203ENST00000484822 CHMP4BQ9H444 224 aaKnown RBP19.2■□□□□ 0.66
RXRA-203ENST00000484822 RCAN3Q9UKA8 241 aa19.19■□□□□ 0.66
RXRA-203ENST00000484822 U2SURPO15042 1029 aaKnown RBP19.19■□□□□ 0.66
RXRA-203ENST00000484822 KIF3BO15066 747 aa19.19■□□□□ 0.66
RXRA-203ENST00000484822 HSPA5P11021 654 aaKnown RBP19.19■□□□□ 0.66
RXRA-203ENST00000484822 KIAA2012Q0VF49 1180 aa19.19■□□□□ 0.66
RXRA-203ENST00000484822 NAP1L2Q9ULW6 460 aaPredicted RBP19.18■□□□□ 0.66
RXRA-203ENST00000484822 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.66
RXRA-203ENST00000484822 HSP90AA2PQ14568 343 aaPredicted RBP19.18■□□□□ 0.66
RXRA-203ENST00000484822 TULP1O00294 542 aaPredicted RBP19.17■□□□□ 0.66
RXRA-203ENST00000484822 VSIG10Q8N0Z9 540 aa19.17■□□□□ 0.66
RXRA-203ENST00000484822 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
RXRA-203ENST00000484822 FOXD1Q16676 465 aa19.16■□□□□ 0.66
RXRA-203ENST00000484822 OS9Q13438 667 aaPredicted RBP19.15■□□□□ 0.66
RXRA-203ENST00000484822 MRC2Q9UBG0 1479 aa19.14■□□□□ 0.66
RXRA-203ENST00000484822 NESP48681 1621 aa19.12■□□□□ 0.65
RXRA-203ENST00000484822 TNNT3P45378 269 aaPredicted RBP19.11■□□□□ 0.65
RXRA-203ENST00000484822 RSPH6AQ9H0K4 717 aa19.1■□□□□ 0.65
RXRA-203ENST00000484822 SRPK2P78362 688 aaKnown RBP19.09■□□□□ 0.65
RXRA-203ENST00000484822 MCCP23508 829 aa19.09■□□□□ 0.65
RXRA-203ENST00000484822 APBB1O00213 710 aa19.09■□□□□ 0.65
RXRA-203ENST00000484822 IFT140Q96RY7 1462 aa19.08■□□□□ 0.64
RXRA-203ENST00000484822 BICRAQ9NZM4 1560 aa19.08■□□□□ 0.64
RXRA-203ENST00000484822 WASHC2CQ9Y4E1 1318 aa19.08■□□□□ 0.64
RXRA-203ENST00000484822 PTMSP20962 102 aa19.07■□□□□ 0.64
RXRA-203ENST00000484822 MFAP1P55081 439 aaKnown RBP19.07■□□□□ 0.64
RXRA-203ENST00000484822 CYB5RLQ6IPT4 315 aa19.07■□□□□ 0.64
RXRA-203ENST00000484822 ROCK2O75116 1388 aaKnown RBP19.06■□□□□ 0.64
RXRA-203ENST00000484822 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
RXRA-203ENST00000484822 USP35Q9P2H5 1018 aa19.06■□□□□ 0.64
RXRA-203ENST00000484822 ERICH3Q5RHP9 1530 aa19.06■□□□□ 0.64
RXRA-203ENST00000484822 SLC4A3P48751 1232 aa19.06■□□□□ 0.64
RXRA-203ENST00000484822 TOPBP1Q92547 1522 aa19.05■□□□□ 0.64
RXRA-203ENST00000484822 GSE1Q14687 1217 aa19.05■□□□□ 0.64
RXRA-203ENST00000484822 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
RXRA-203ENST00000484822 KIF21BO75037 1637 aa19.03■□□□□ 0.64
RXRA-203ENST00000484822 RWDD1Q9H446 243 aaPredicted RBP19.03■□□□□ 0.64
RXRA-203ENST00000484822 FOXD4L1Q9NU39 408 aa19.02■□□□□ 0.64
RXRA-203ENST00000484822 TOP2BQ02880 1626 aa19.02■□□□□ 0.63
RXRA-203ENST00000484822 STK26Q9P289 416 aa19.01■□□□□ 0.63
RXRA-203ENST00000484822 EIF3AQ14152 1382 aaKnown RBP19.01■□□□□ 0.63
RXRA-203ENST00000484822 CALD1Q05682 793 aaKnown RBP19.01■□□□□ 0.63
RXRA-203ENST00000484822 SAFB2Q14151 953 aaKnown RBP eCLIP19.01■□□□□ 0.63
RXRA-203ENST00000484822 L3MBTL2Q969R5 705 aa19■□□□□ 0.63
RXRA-203ENST00000484822 MYOM3Q5VTT5 1437 aa19■□□□□ 0.63
RXRA-203ENST00000484822 KTN1Q86UP2 1357 aaKnown RBP18.99■□□□□ 0.63
RXRA-203ENST00000484822 POLA1P09884 1462 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms