RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 ROCK1Q13464 1354 aa12.81□□□□□ -0.36
SND1-211ENST00000484767 DNMT1P26358 1616 aaKnown RBP12.79□□□□□ -0.36
SND1-211ENST00000484767 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
SND1-211ENST00000484767 DENND4BO75064 1496 aaPredicted RBP12.77□□□□□ -0.37
SND1-211ENST00000484767 TDRD9Q8NDG6 1382 aaKnown RBP12.76□□□□□ -0.37
SND1-211ENST00000484767 ADGBQ8N7X0 1667 aa12.76□□□□□ -0.37
SND1-211ENST00000484767 ITSN2Q9NZM3 1697 aa12.75□□□□□ -0.37
SND1-211ENST00000484767 NCOA1Q15788 1441 aa12.74□□□□□ -0.37
SND1-211ENST00000484767 EIF4G2P78344 907 aaKnown RBP eCLIP12.74□□□□□ -0.373e-7■■■■□ 26.1
SND1-211ENST00000484767 KDM6BO15054 1643 aa12.73□□□□□ -0.37
SND1-211ENST00000484767 RPRD2Q5VT52 1461 aaKnown RBP12.73□□□□□ -0.37
SND1-211ENST00000484767 KIAA0556O60303 1618 aa12.71□□□□□ -0.37
SND1-211ENST00000484767 ADCY10Q96PN6 1610 aa12.71□□□□□ -0.37
SND1-211ENST00000484767 HSPA5P11021 654 aaKnown RBP12.71□□□□□ -0.37
SND1-211ENST00000484767 TRIM52Q96A61 297 aa12.71□□□□□ -0.37
SND1-211ENST00000484767 BCANQ96GW7 911 aa12.71□□□□□ -0.37
SND1-211ENST00000484767 RBM19Q9Y4C8 960 aaKnown RBP12.71□□□□□ -0.37
SND1-211ENST00000484767 DAPK1P53355 1430 aa12.71□□□□□ -0.38
SND1-211ENST00000484767 RAPGEF6Q8TEU7 1601 aa12.7□□□□□ -0.38
SND1-211ENST00000484767 WASHC2AQ641Q2 1341 aa12.7□□□□□ -0.38
SND1-211ENST00000484767 TEX14Q8IWB6 1497 aa12.7□□□□□ -0.38
SND1-211ENST00000484767 CROCC2H7BZ55 1655 aa12.7□□□□□ -0.38
SND1-211ENST00000484767 HIRIP3Q9BW71 556 aaPredicted RBP12.69□□□□□ -0.38
SND1-211ENST00000484767 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
SND1-211ENST00000484767 ANKRD30BQ9BXX2 1392 aa12.69□□□□□ -0.38
SND1-211ENST00000484767 CDK13Q14004 1512 aaKnown RBP12.68□□□□□ -0.38
SND1-211ENST00000484767 FANCIQ9NVI1 1328 aa12.68□□□□□ -0.38
SND1-211ENST00000484767 MRC2Q9UBG0 1479 aa12.68□□□□□ -0.38
SND1-211ENST00000484767 MPHOSPH9Q99550 1183 aa12.68□□□□□ -0.38
SND1-211ENST00000484767 KIAA0586Q9BVV6 1533 aa12.67□□□□□ -0.38
SND1-211ENST00000484767 HNRNPUQ00839 825 aaKnown RBP eCLIP12.67□□□□□ -0.385e-6■□□□□ 10.1
SND1-211ENST00000484767 KIF14Q15058 1648 aa12.66□□□□□ -0.38
SND1-211ENST00000484767 ADGRL2O95490 1459 aa12.65□□□□□ -0.38
SND1-211ENST00000484767 IFT140Q96RY7 1462 aa12.65□□□□□ -0.38
SND1-211ENST00000484767 SPATA31E1Q6ZUB1 1445 aa12.65□□□□□ -0.38
SND1-211ENST00000484767 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
SND1-211ENST00000484767 RRP7BPQ9NSQ0 103 aa12.65□□□□□ -0.38
SND1-211ENST00000484767 CDK11AQ9UQ88 783 aaPredicted RBP12.65□□□□□ -0.38
SND1-211ENST00000484767 ARID4BQ4LE39 1312 aaPredicted RBP12.64□□□□□ -0.39
SND1-211ENST00000484767 ZBED9Q6R2W3 1325 aa12.64□□□□□ -0.39
SND1-211ENST00000484767 ABCC5O15440 1437 aa12.64□□□□□ -0.39
SND1-211ENST00000484767 PPP4R2Q9NY27 417 aa12.64□□□□□ -0.39
SND1-211ENST00000484767 MBD5Q9P267 1494 aa12.64□□□□□ -0.39
SND1-211ENST00000484767 L3MBTL2Q969R5 705 aa12.63□□□□□ -0.39
SND1-211ENST00000484767 DISP1Q96F81 1524 aa12.62□□□□□ -0.39
SND1-211ENST00000484767 PRKRIP1Q9H875 184 aaPredicted RBP12.62□□□□□ -0.39
SND1-211ENST00000484767 NUP153P49790 1475 aaKnown RBP12.61□□□□□ -0.39
SND1-211ENST00000484767 PZPP20742 1482 aa12.6□□□□□ -0.39
SND1-211ENST00000484767 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
SND1-211ENST00000484767 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
SND1-211ENST00000484767 TROQ12816 1431 aaPredicted RBP12.6□□□□□ -0.39
SND1-211ENST00000484767 CHIC2Q9UKJ5 165 aa12.59□□□□□ -0.39
SND1-211ENST00000484767 ARHGEF12Q9NZN5 1544 aa12.58□□□□□ -0.4
SND1-211ENST00000484767 KDM5CP41229 1560 aa12.58□□□□□ -0.4
SND1-211ENST00000484767 CAMSAP2Q08AD1 1489 aa12.58□□□□□ -0.4
SND1-211ENST00000484767 SHANK2Q9UPX8 1470 aa12.58□□□□□ -0.4
SND1-211ENST00000484767 KDM5DQ9BY66 1539 aa12.57□□□□□ -0.4
SND1-211ENST00000484767 ROCK2O75116 1388 aaKnown RBP12.57□□□□□ -0.4
SND1-211ENST00000484767 UHRF1BP1Q6BDS2 1440 aa12.57□□□□□ -0.4
SND1-211ENST00000484767 KIAA1107Q9UPP5 1409 aa12.57□□□□□ -0.4
SND1-211ENST00000484767 GRIN2AQ12879 1464 aa12.57□□□□□ -0.4
SND1-211ENST00000484767 SMG6Q86US8 1419 aaKnown RBP12.56□□□□□ -0.4
SND1-211ENST00000484767 MAGI1Q96QZ7 1491 aaPredicted RBP12.55□□□□□ -0.4
SND1-211ENST00000484767 KIF7Q2M1P5 1343 aa12.55□□□□□ -0.4
SND1-211ENST00000484767 KTN1Q86UP2 1357 aaKnown RBP12.55□□□□□ -0.4
SND1-211ENST00000484767 NBPF8Q3BBV2 869 aa12.54□□□□□ -0.4
SND1-211ENST00000484767 MRS2Q9HD23 443 aa12.54□□□□□ -0.4
SND1-211ENST00000484767 BCORL1Q5H9F3 1711 aa12.54□□□□□ -0.4
SND1-211ENST00000484767 RALGAPBQ86X10 1494 aa12.53□□□□□ -0.4
SND1-211ENST00000484767 EIF4G3O43432 1585 aaKnown RBP12.53□□□□□ -0.4
SND1-211ENST00000484767 SLC4A1APQ9BWU0 796 aaKnown RBP12.53□□□□□ -0.4
SND1-211ENST00000484767 GPATCH8Q9UKJ3 1502 aaKnown RBP12.52□□□□□ -0.4
SND1-211ENST00000484767 E9PCH4 1651 aa12.52□□□□□ -0.4
SND1-211ENST00000484767 CDC42BPAQ5VT25 1732 aa12.52□□□□□ -0.41
SND1-211ENST00000484767 C11orf95C9JLR9 678 aaPredicted RBP12.52□□□□□ -0.41
SND1-211ENST00000484767 DHX29Q7Z478 1369 aaKnown RBP12.52□□□□□ -0.41
SND1-211ENST00000484767 ANKRD30AQ9BXX3 1397 aa12.52□□□□□ -0.41
SND1-211ENST00000484767 RNF123Q5XPI4 1314 aa12.51□□□□□ -0.41
SND1-211ENST00000484767 ARHGEF5Q12774 1597 aa12.51□□□□□ -0.41
SND1-211ENST00000484767 CEP170Q5SW79 1584 aa12.5□□□□□ -0.41
SND1-211ENST00000484767 RIMBP3CA6NJZ7 1639 aa12.5□□□□□ -0.41
SND1-211ENST00000484767 RIMBP3BA6NNM3 1639 aa12.5□□□□□ -0.41
SND1-211ENST00000484767 RIMBP3Q9UFD9 1639 aa12.5□□□□□ -0.41
SND1-211ENST00000484767 CARMIL2Q6F5E8 1435 aa12.49□□□□□ -0.41
SND1-211ENST00000484767 USP47Q96K76 1375 aa12.48□□□□□ -0.41
SND1-211ENST00000484767 ERICH6Q7L0X2 663 aa12.48□□□□□ -0.41
SND1-211ENST00000484767 LAMC1P11047 1609 aa12.48□□□□□ -0.41
SND1-211ENST00000484767 ABCA8O94911 1581 aa12.47□□□□□ -0.41
SND1-211ENST00000484767 SYNJ2O15056 1496 aa12.47□□□□□ -0.41
SND1-211ENST00000484767 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
SND1-211ENST00000484767 CCDC184Q52MB2 194 aa12.47□□□□□ -0.41
SND1-211ENST00000484767 NUDCQ9Y266 331 aa12.47□□□□□ -0.41
SND1-211ENST00000484767 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
SND1-211ENST00000484767 FAM9BQ8IZU0 186 aa12.46□□□□□ -0.41
SND1-211ENST00000484767 CFDP1Q9UEE9 299 aaPredicted RBP12.46□□□□□ -0.41
SND1-211ENST00000484767 ABCC10Q5T3U5 1492 aa12.46□□□□□ -0.42
SND1-211ENST00000484767 PTPRGP23470 1445 aa12.45□□□□□ -0.42
SND1-211ENST00000484767 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
SND1-211ENST00000484767 ANKRD50Q9ULJ7 1429 aa12.45□□□□□ -0.42
SND1-211ENST00000484767 ZMYM4Q5VZL5 1548 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms