RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 CDK13Q14004 1512 aaKnown RBP10.71□□□□□ -0.69
SHROOM3-206ENST00000484236 CDK11AQ9UQ88 783 aaPredicted RBP10.71□□□□□ -0.69
SHROOM3-206ENST00000484236 NAIPQ13075 1403 aa10.7□□□□□ -0.7
SHROOM3-206ENST00000484236 PTPRKQ15262 1439 aa10.7□□□□□ -0.7
SHROOM3-206ENST00000484236 CENPBP07199 599 aaPredicted RBP10.7□□□□□ -0.7
SHROOM3-206ENST00000484236 ADCY10Q96PN6 1610 aa10.69□□□□□ -0.7
SHROOM3-206ENST00000484236 ITSN2Q9NZM3 1697 aa10.68□□□□□ -0.7
SHROOM3-206ENST00000484236 ABCB7O75027 752 aa10.67□□□□□ -0.7
SHROOM3-206ENST00000484236 TROQ12816 1431 aaPredicted RBP10.66□□□□□ -0.7
SHROOM3-206ENST00000484236 DNMT1P26358 1616 aaKnown RBP10.66□□□□□ -0.7
SHROOM3-206ENST00000484236 ROCK1Q13464 1354 aa10.65□□□□□ -0.7
SHROOM3-206ENST00000484236 TRHP20396 242 aaPredicted RBP10.64□□□□□ -0.71
SHROOM3-206ENST00000484236 JPH4Q96JJ6 628 aa10.64□□□□□ -0.71
SHROOM3-206ENST00000484236 ABCA8O94911 1581 aa10.64□□□□□ -0.71
SHROOM3-206ENST00000484236 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
SHROOM3-206ENST00000484236 MIER1Q8N108 512 aa10.62□□□□□ -0.71
SHROOM3-206ENST00000484236 DAPK1P53355 1430 aa10.61□□□□□ -0.71
SHROOM3-206ENST00000484236 CHRDL2Q6WN34 429 aa10.61□□□□□ -0.71
SHROOM3-206ENST00000484236 PLB1Q6P1J6 1458 aa10.61□□□□□ -0.71
SHROOM3-206ENST00000484236 ADGBQ8N7X0 1667 aa10.6□□□□□ -0.71
SHROOM3-206ENST00000484236 PPP1R15AO75807 674 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-206ENST00000484236 FBLN2P98095 1184 aa10.6□□□□□ -0.71
SHROOM3-206ENST00000484236 SIN3AQ96ST3 1273 aa10.6□□□□□ -0.71
SHROOM3-206ENST00000484236 SP7Q8TDD2 431 aaPredicted RBP10.59□□□□□ -0.71
SHROOM3-206ENST00000484236 TONSLQ96HA7 1378 aa10.59□□□□□ -0.71
SHROOM3-206ENST00000484236 ABCC5O15440 1437 aa10.58□□□□□ -0.72
SHROOM3-206ENST00000484236 SHROOM2Q13796 1616 aa10.58□□□□□ -0.72
SHROOM3-206ENST00000484236 KIF14Q15058 1648 aa10.58□□□□□ -0.72
SHROOM3-206ENST00000484236 CHD1O14646 1710 aa10.58□□□□□ -0.72
SHROOM3-206ENST00000484236 NEUROD1Q13562 356 aa10.58□□□□□ -0.72
SHROOM3-206ENST00000484236 GPATCH8Q9UKJ3 1502 aaKnown RBP10.58□□□□□ -0.72
SHROOM3-206ENST00000484236 PRG4Q92954 1404 aaPredicted RBP10.58□□□□□ -0.72
SHROOM3-206ENST00000484236 CROCC2H7BZ55 1655 aa10.57□□□□□ -0.72
SHROOM3-206ENST00000484236 ADGRL2O95490 1459 aa10.56□□□□□ -0.72
SHROOM3-206ENST00000484236 CAMSAP2Q08AD1 1489 aa10.56□□□□□ -0.72
SHROOM3-206ENST00000484236 RRP7BPQ9NSQ0 103 aa10.56□□□□□ -0.72
SHROOM3-206ENST00000484236 CDC42BPAQ5VT25 1732 aa10.55□□□□□ -0.72
SHROOM3-206ENST00000484236 ATP10BO94823 1461 aa10.55□□□□□ -0.72
SHROOM3-206ENST00000484236 ABCC10Q5T3U5 1492 aa10.55□□□□□ -0.72
SHROOM3-206ENST00000484236 KDM6BO15054 1643 aa10.55□□□□□ -0.72
SHROOM3-206ENST00000484236 PLEKHD1A6NEE1 506 aa10.54□□□□□ -0.72
SHROOM3-206ENST00000484236 ARID3CA6NKF2 412 aa10.54□□□□□ -0.72
SHROOM3-206ENST00000484236 CFDP1Q9UEE9 299 aaPredicted RBP10.54□□□□□ -0.72
SHROOM3-206ENST00000484236 SHANK2Q9UPX8 1470 aa10.54□□□□□ -0.72
SHROOM3-206ENST00000484236 PTPRGP23470 1445 aa10.53□□□□□ -0.72
SHROOM3-206ENST00000484236 CHIC2Q9UKJ5 165 aa10.53□□□□□ -0.72
SHROOM3-206ENST00000484236 DENND4BO75064 1496 aaPredicted RBP10.53□□□□□ -0.72
SHROOM3-206ENST00000484236 MPHOSPH9Q99550 1183 aa10.52□□□□□ -0.73
SHROOM3-206ENST00000484236 KDM5BQ9UGL1 1544 aa10.52□□□□□ -0.73
SHROOM3-206ENST00000484236 NCOA1Q15788 1441 aa10.51□□□□□ -0.73
SHROOM3-206ENST00000484236 TRIM52Q96A61 297 aa10.51□□□□□ -0.73
SHROOM3-206ENST00000484236 RBM42Q9BTD8 480 aaKnown RBP10.51□□□□□ -0.73
SHROOM3-206ENST00000484236 ZNF219Q9P2Y4 722 aaPredicted RBP10.51□□□□□ -0.73
SHROOM3-206ENST00000484236 ARHGEF5Q12774 1597 aa10.51□□□□□ -0.73
SHROOM3-206ENST00000484236 ANKRD30AQ9BXX3 1397 aa10.5□□□□□ -0.73
SHROOM3-206ENST00000484236 ZNF644Q9H582 1327 aaPredicted RBP10.49□□□□□ -0.73
SHROOM3-206ENST00000484236 PREX2Q70Z35 1606 aa10.48□□□□□ -0.73
SHROOM3-206ENST00000484236 ANKRD30BQ9BXX2 1392 aa10.48□□□□□ -0.73
SHROOM3-206ENST00000484236 RPRD2Q5VT52 1461 aaKnown RBP10.48□□□□□ -0.73
SHROOM3-206ENST00000484236 RSPH4AQ5TD94 716 aa10.47□□□□□ -0.73
SHROOM3-206ENST00000484236 ABCC2Q92887 1545 aa10.47□□□□□ -0.73
SHROOM3-206ENST00000484236 CLASP1Q7Z460 1538 aa10.46□□□□□ -0.74
SHROOM3-206ENST00000484236 CDC42BPBQ9Y5S2 1711 aa10.46□□□□□ -0.74
SHROOM3-206ENST00000484236 KDM5DQ9BY66 1539 aa10.45□□□□□ -0.74
SHROOM3-206ENST00000484236 UHRF1BP1LA0JNW5 1464 aa10.45□□□□□ -0.74
SHROOM3-206ENST00000484236 PZPP20742 1482 aa10.45□□□□□ -0.74
SHROOM3-206ENST00000484236 YTHDC1Q96MU7 727 aaKnown RBP10.45□□□□□ -0.74
SHROOM3-206ENST00000484236 GTF3C3Q9Y5Q9 886 aa10.45□□□□□ -0.74
SHROOM3-206ENST00000484236 MAST1Q9Y2H9 1570 aa10.44□□□□□ -0.74
SHROOM3-206ENST00000484236 C9orf84Q5VXU9 1444 aa10.44□□□□□ -0.74
SHROOM3-206ENST00000484236 ANKRD50Q9ULJ7 1429 aa10.44□□□□□ -0.74
SHROOM3-206ENST00000484236 PLEKHH2Q8IVE3 1493 aa10.43□□□□□ -0.74
SHROOM3-206ENST00000484236 SLC4A1APQ9BWU0 796 aaKnown RBP10.43□□□□□ -0.74
SHROOM3-206ENST00000484236 MYO5CQ9NQX4 1742 aa10.43□□□□□ -0.74
SHROOM3-206ENST00000484236 SAMD9LQ8IVG5 1584 aa10.43□□□□□ -0.74
SHROOM3-206ENST00000484236 CCDC141Q6ZP82 1450 aa10.42□□□□□ -0.74
SHROOM3-206ENST00000484236 TEX14Q8IWB6 1497 aa10.42□□□□□ -0.74
SHROOM3-206ENST00000484236 MBD5Q9P267 1494 aa10.42□□□□□ -0.74
SHROOM3-206ENST00000484236 KIAA1107Q9UPP5 1409 aa10.42□□□□□ -0.74
SHROOM3-206ENST00000484236 CCER2I3L3R5 266 aa10.42□□□□□ -0.74
SHROOM3-206ENST00000484236 TSPY4P0CV99 314 aa10.42□□□□□ -0.74
SHROOM3-206ENST00000484236 TSPY10P0CW01 314 aa10.42□□□□□ -0.74
SHROOM3-206ENST00000484236 ZNF777Q9ULD5 760 aaPredicted RBP10.42□□□□□ -0.74
SHROOM3-206ENST00000484236 DDX10Q13206 875 aaKnown RBP10.41□□□□□ -0.74
SHROOM3-206ENST00000484236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.4□□□□□ -0.74
SHROOM3-206ENST00000484236 L3MBTL2Q969R5 705 aa10.4□□□□□ -0.74
SHROOM3-206ENST00000484236 POLR1AO95602 1720 aaPredicted RBP10.39□□□□□ -0.75
SHROOM3-206ENST00000484236 EIF4G2P78344 907 aaKnown RBP eCLIP10.39□□□□□ -0.75
SHROOM3-206ENST00000484236 ERCC6L2Q5T890 1561 aa10.39□□□□□ -0.75
SHROOM3-206ENST00000484236 TTC37Q6PGP7 1564 aa10.39□□□□□ -0.75
SHROOM3-206ENST00000484236 ZCCHC11Q5TAX3 1644 aaKnown RBP10.38□□□□□ -0.75
SHROOM3-206ENST00000484236 ANP32CO43423 234 aa10.38□□□□□ -0.75
SHROOM3-206ENST00000484236 PLXNC1O60486 1568 aa10.38□□□□□ -0.75
SHROOM3-206ENST00000484236 KIF15Q9NS87 1388 aa10.38□□□□□ -0.75
SHROOM3-206ENST00000484236 ARHGAP5Q13017 1502 aa10.38□□□□□ -0.75
SHROOM3-206ENST00000484236 ARAP3Q8WWN8 1544 aa10.38□□□□□ -0.75
SHROOM3-206ENST00000484236 UNC13BO14795 1591 aa10.36□□□□□ -0.75
SHROOM3-206ENST00000484236 ARHGEF12Q9NZN5 1544 aa10.36□□□□□ -0.75
SHROOM3-206ENST00000484236 PLCH2O75038 1416 aa10.35□□□□□ -0.75
SHROOM3-206ENST00000484236 SYCP2Q9BX26 1530 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms