RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 MLECQ14165 292 aa21.52■■□□□ 1.04
DNMT3A-213ENST00000484184 PLCH2O75038 1416 aa21.52■■□□□ 1.04
DNMT3A-213ENST00000484184 SCAPERQ9BY12 1400 aa21.52■■□□□ 1.04
DNMT3A-213ENST00000484184 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
DNMT3A-213ENST00000484184 ATP10AO60312 1499 aa21.47■■□□□ 1.03
DNMT3A-213ENST00000484184 C9orf84Q5VXU9 1444 aa21.43■■□□□ 1.02
DNMT3A-213ENST00000484184 CEBPAP49715 358 aaPredicted RBP21.42■■□□□ 1.02
DNMT3A-213ENST00000484184 PREX1Q8TCU6 1659 aa21.42■■□□□ 1.02
DNMT3A-213ENST00000484184 EFCAB2Q5VUJ9 269 aa21.41■■□□□ 1.02
DNMT3A-213ENST00000484184 STRCQ7RTU9 1775 aa21.39■■□□□ 1.01
DNMT3A-213ENST00000484184 MYO5CQ9NQX4 1742 aa21.39■■□□□ 1.01
DNMT3A-213ENST00000484184 KIF14Q15058 1648 aa21.37■■□□□ 1.01
DNMT3A-213ENST00000484184 KDM5CP41229 1560 aa21.36■■□□□ 1.01
DNMT3A-213ENST00000484184 SETD1BQ9UPS6 1966 aaKnown RBP21.36■■□□□ 1.01
DNMT3A-213ENST00000484184 AFAP1Q8N556 730 aa21.35■■□□□ 1.01
DNMT3A-213ENST00000484184 ZNF518AQ6AHZ1 1483 aa21.34■■□□□ 1.01
DNMT3A-213ENST00000484184 FMN1Q68DA7 1419 aa21.33■■□□□ 1.01
DNMT3A-213ENST00000484184 ARHGAP35Q9NRY4 1499 aa21.32■■□□□ 1
DNMT3A-213ENST00000484184 TROQ12816 1431 aaPredicted RBP21.31■■□□□ 1
DNMT3A-213ENST00000484184 DIP2CQ9Y2E4 1556 aa21.31■■□□□ 1
DNMT3A-213ENST00000484184 UHRF1BP1Q6BDS2 1440 aa21.3■■□□□ 1
DNMT3A-213ENST00000484184 ILDR2Q71H61 639 aa21.3■■□□□ 1
DNMT3A-213ENST00000484184 ATP1B4Q9UN42 357 aaPredicted RBP21.3■■□□□ 1
DNMT3A-213ENST00000484184 DMRT2Q9Y5R5 561 aa21.3■■□□□ 1
DNMT3A-213ENST00000484184 REREQ9P2R6 1566 aa21.3■■□□□ 1
DNMT3A-213ENST00000484184 CDK11AQ9UQ88 783 aaPredicted RBP21.29■■□□□ 1
DNMT3A-213ENST00000484184 ARHGAP5Q13017 1502 aa21.29■■□□□ 1
DNMT3A-213ENST00000484184 LRRIQ1Q96JM4 1722 aa21.27■■□□□ 1
DNMT3A-213ENST00000484184 MLH3Q9UHC1 1453 aa21.26■□□□□ 0.99
DNMT3A-213ENST00000484184 ABCA6Q8N139 1617 aa21.26■□□□□ 0.99
DNMT3A-213ENST00000484184 C3P01024 1663 aa21.25■□□□□ 0.99
DNMT3A-213ENST00000484184 CDC42BPBQ9Y5S2 1711 aa21.25■□□□□ 0.99
DNMT3A-213ENST00000484184 DISP3Q9P2K9 1392 aa21.24■□□□□ 0.99
DNMT3A-213ENST00000484184 PTPRTO14522 1441 aa21.24■□□□□ 0.99
DNMT3A-213ENST00000484184 AGLP35573 1532 aa21.24■□□□□ 0.99
DNMT3A-213ENST00000484184 TRAPPC8Q9Y2L5 1435 aa21.23■□□□□ 0.99
DNMT3A-213ENST00000484184 UBTFP17480 764 aaKnown RBP21.23■□□□□ 0.99
DNMT3A-213ENST00000484184 EHMT2Q96KQ7 1210 aa21.22■□□□□ 0.99
DNMT3A-213ENST00000484184 CLIP1P30622 1438 aa21.21■□□□□ 0.99
DNMT3A-213ENST00000484184 LTBP4Q8N2S1 1624 aa21.21■□□□□ 0.99
DNMT3A-213ENST00000484184 ABCC1P33527 1531 aa21.19■□□□□ 0.98
DNMT3A-213ENST00000484184 SOCS7O14512 581 aa21.19■□□□□ 0.98
DNMT3A-213ENST00000484184 PREX2Q70Z35 1606 aa21.18■□□□□ 0.98
DNMT3A-213ENST00000484184 MYT1LQ9UL68 1186 aa21.18■□□□□ 0.98
DNMT3A-213ENST00000484184 KIDINS220Q9ULH0 1771 aa21.17■□□□□ 0.98
DNMT3A-213ENST00000484184 ITSN2Q9NZM3 1697 aa21.15■□□□□ 0.98
DNMT3A-213ENST00000484184 NCOA1Q15788 1441 aa21.15■□□□□ 0.98
DNMT3A-213ENST00000484184 CNTLNQ9NXG0 1405 aa21.12■□□□□ 0.97
DNMT3A-213ENST00000484184 IQSEC2Q5JU85 1478 aa21.11■□□□□ 0.97
DNMT3A-213ENST00000484184 SPATA31D1Q6ZQQ2 1576 aa21.1■□□□□ 0.97
DNMT3A-213ENST00000484184 CDC42BPAQ5VT25 1732 aa21.1■□□□□ 0.97
DNMT3A-213ENST00000484184 ESF1Q9H501 851 aaKnown RBP21.1■□□□□ 0.97
DNMT3A-213ENST00000484184 CASKIN1Q8WXD9 1431 aa21.1■□□□□ 0.97
DNMT3A-213ENST00000484184 NPATQ14207 1427 aa21.08■□□□□ 0.97
DNMT3A-213ENST00000484184 CCDC18Q5T9S5 1454 aa21.07■□□□□ 0.96
DNMT3A-213ENST00000484184 SAMD9LQ8IVG5 1584 aa21.07■□□□□ 0.96
DNMT3A-213ENST00000484184 MROH2AA6NES4 1674 aa21.06■□□□□ 0.96
DNMT3A-213ENST00000484184 CAMSAP1Q5T5Y3 1602 aa21.06■□□□□ 0.96
DNMT3A-213ENST00000484184 ZMYM3Q14202 1370 aa21.06■□□□□ 0.96
DNMT3A-213ENST00000484184 SYCP2Q9BX26 1530 aa21.01■□□□□ 0.95
DNMT3A-213ENST00000484184 GPATCH8Q9UKJ3 1502 aaKnown RBP21.01■□□□□ 0.95
DNMT3A-213ENST00000484184 NCKAP5LQ9HCH0 1330 aa21.01■□□□□ 0.95
DNMT3A-213ENST00000484184 ZNF335Q9H4Z2 1342 aaPredicted RBP21■□□□□ 0.95
DNMT3A-213ENST00000484184 PLXNC1O60486 1568 aa20.99■□□□□ 0.95
DNMT3A-213ENST00000484184 CHIC1Q5VXU3 224 aa20.99■□□□□ 0.95
DNMT3A-213ENST00000484184 SPAG9O60271 1321 aaKnown RBP20.99■□□□□ 0.95
DNMT3A-213ENST00000484184 SUPT6HQ7KZ85 1726 aaKnown RBP20.98■□□□□ 0.95
DNMT3A-213ENST00000484184 HNRNPMP52272 730 aaKnown RBP eCLIP20.98■□□□□ 0.95
DNMT3A-213ENST00000484184 ZNF777Q9ULD5 760 aaPredicted RBP20.98■□□□□ 0.95
DNMT3A-213ENST00000484184 ZNF142P52746 1687 aaPredicted RBP20.97■□□□□ 0.95
DNMT3A-213ENST00000484184 PTPRKQ15262 1439 aa20.96■□□□□ 0.95
DNMT3A-213ENST00000484184 PLA2R1Q13018 1463 aa20.96■□□□□ 0.95
DNMT3A-213ENST00000484184 FYCO1Q9BQS8 1478 aa20.96■□□□□ 0.95
DNMT3A-213ENST00000484184 ATP7AQ04656 1500 aa20.96■□□□□ 0.95
DNMT3A-213ENST00000484184 CLTCQ00610 1675 aaKnown RBP20.96■□□□□ 0.95
DNMT3A-213ENST00000484184 KIAA1107Q9UPP5 1409 aa20.95■□□□□ 0.95
DNMT3A-213ENST00000484184 TCOF1Q13428 1488 aaKnown RBP20.95■□□□□ 0.94
DNMT3A-213ENST00000484184 INO80Q9ULG1 1556 aaPredicted RBP20.95■□□□□ 0.94
DNMT3A-213ENST00000484184 MYO3AQ8NEV4 1616 aa20.95■□□□□ 0.94
DNMT3A-213ENST00000484184 A2MP01023 1474 aa20.94■□□□□ 0.94
DNMT3A-213ENST00000484184 CEP170BQ9Y4F5 1589 aaPredicted RBP20.93■□□□□ 0.94
DNMT3A-213ENST00000484184 PKD2Q13563 968 aa20.92■□□□□ 0.94
DNMT3A-213ENST00000484184 UBAP1LF5GYI3 381 aa20.91■□□□□ 0.94
DNMT3A-213ENST00000484184 PLEKHH2Q8IVE3 1493 aa20.89■□□□□ 0.94
DNMT3A-213ENST00000484184 GGT6Q6P531 493 aa20.88■□□□□ 0.93
DNMT3A-213ENST00000484184 CFDP1Q9UEE9 299 aaPredicted RBP20.88■□□□□ 0.93
DNMT3A-213ENST00000484184 PPP6R1Q9UPN7 881 aa20.85■□□□□ 0.93
DNMT3A-213ENST00000484184 CCNB3Q8WWL7 1395 aa20.84■□□□□ 0.93
DNMT3A-213ENST00000484184 ADGBQ8N7X0 1667 aa20.83■□□□□ 0.93
DNMT3A-213ENST00000484184 DNMT1P26358 1616 aaKnown RBP20.82■□□□□ 0.92
DNMT3A-213ENST00000484184 A2ML1A8K2U0 1454 aa20.82■□□□□ 0.92
DNMT3A-213ENST00000484184 MBD5Q9P267 1494 aa20.82■□□□□ 0.92
DNMT3A-213ENST00000484184 ZNF644Q9H582 1327 aaPredicted RBP20.82■□□□□ 0.92
DNMT3A-213ENST00000484184 TIAM1Q13009 1591 aa20.78■□□□□ 0.92
DNMT3A-213ENST00000484184 NEURL4Q96JN8 1562 aa20.78■□□□□ 0.92
DNMT3A-213ENST00000484184 RTEL1-TNFRSF6BF6WH68 1400 aa20.77■□□□□ 0.91
DNMT3A-213ENST00000484184 MTUS2Q5JR59 1369 aa20.76■□□□□ 0.91
DNMT3A-213ENST00000484184 DHX29Q7Z478 1369 aaKnown RBP20.76■□□□□ 0.91
DNMT3A-213ENST00000484184 HSPA1LP34931 641 aa20.76■□□□□ 0.91
DNMT3A-213ENST00000484184 FBXO31Q5XUX0 539 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms