RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 AKNAQ7Z591 1439 aa26.95■■□□□ 1.91
RPUSD3-216ENST00000484134 NOP58Q9Y2X3 529 aaKnown RBP26.95■■□□□ 1.91
RPUSD3-216ENST00000484134 TDRD9Q8NDG6 1382 aaKnown RBP26.94■■□□□ 1.9
RPUSD3-216ENST00000484134 SPATA31E1Q6ZUB1 1445 aa26.94■■□□□ 1.9
RPUSD3-216ENST00000484134 NESP48681 1621 aa26.93■■□□□ 1.9
RPUSD3-216ENST00000484134 ANKRD30BQ9BXX2 1392 aa26.91■■□□□ 1.9
RPUSD3-216ENST00000484134 SMG6Q86US8 1419 aaKnown RBP26.89■■□□□ 1.89
RPUSD3-216ENST00000484134 RPRD2Q5VT52 1461 aaKnown RBP26.88■■□□□ 1.89
RPUSD3-216ENST00000484134 TEX14Q8IWB6 1497 aa26.88■■□□□ 1.89
RPUSD3-216ENST00000484134 NBR1Q14596 966 aa26.88■■□□□ 1.89
RPUSD3-216ENST00000484134 ABCA5Q8WWZ7 1642 aa26.84■■□□□ 1.89
RPUSD3-216ENST00000484134 RNF123Q5XPI4 1314 aa26.84■■□□□ 1.89
RPUSD3-216ENST00000484134 URB2Q14146 1524 aaKnown RBP26.83■■□□□ 1.89
RPUSD3-216ENST00000484134 CNGB1Q14028 1251 aaPredicted RBP26.82■■□□□ 1.88
RPUSD3-216ENST00000484134 POLR1AO95602 1720 aaPredicted RBP26.82■■□□□ 1.88
RPUSD3-216ENST00000484134 GAPVD1Q14C86 1478 aa26.82■■□□□ 1.88
RPUSD3-216ENST00000484134 DHX29Q7Z478 1369 aaKnown RBP26.82■■□□□ 1.88
RPUSD3-216ENST00000484134 NUDCQ9Y266 331 aa26.81■■□□□ 1.88
RPUSD3-216ENST00000484134 MIA2Q96PC5 1412 aa26.8■■□□□ 1.88
RPUSD3-216ENST00000484134 SENP3-EIF4A1A0A087X0R7 540 aa26.79■■□□□ 1.88
RPUSD3-216ENST00000484134 EPRSP07814 1512 aaKnown RBP26.79■■□□□ 1.88
RPUSD3-216ENST00000484134 CCDC136Q96JN2 1154 aa26.78■■□□□ 1.88
RPUSD3-216ENST00000484134 ARID3CA6NKF2 412 aa26.78■■□□□ 1.88
RPUSD3-216ENST00000484134 CDK13Q14004 1512 aaKnown RBP26.77■■□□□ 1.88
RPUSD3-216ENST00000484134 KIF21AQ7Z4S6 1674 aa26.77■■□□□ 1.88
RPUSD3-216ENST00000484134 LAMC3Q9Y6N6 1575 aa26.75■■□□□ 1.87
RPUSD3-216ENST00000484134 IPO9Q96P70 1041 aaKnown RBP26.74■■□□□ 1.87
RPUSD3-216ENST00000484134 SLC4A1APQ9BWU0 796 aaKnown RBP26.74■■□□□ 1.87
RPUSD3-216ENST00000484134 DAPK1P53355 1430 aa26.71■■□□□ 1.87
RPUSD3-216ENST00000484134 ROCK1Q13464 1354 aa26.7■■□□□ 1.87
RPUSD3-216ENST00000484134 BCORL1Q5H9F3 1711 aa26.69■■□□□ 1.86
RPUSD3-216ENST00000484134 ANP32AP39687 249 aaKnown RBP26.69■■□□□ 1.86
RPUSD3-216ENST00000484134 ZNF644Q9H582 1327 aaPredicted RBP26.69■■□□□ 1.86
RPUSD3-216ENST00000484134 ABCC5O15440 1437 aa26.69■■□□□ 1.86
RPUSD3-216ENST00000484134 POLR3GLQ9BT43 218 aa26.68■■□□□ 1.86
RPUSD3-216ENST00000484134 PNISRQ8TF01 805 aaKnown RBP26.66■■□□□ 1.86
RPUSD3-216ENST00000484134 ZBTB47Q9UFB7 747 aaPredicted RBP26.63■■□□□ 1.85
RPUSD3-216ENST00000484134 USP47Q96K76 1375 aa26.63■■□□□ 1.85
RPUSD3-216ENST00000484134 WDR62O43379 1518 aa26.62■■□□□ 1.85
RPUSD3-216ENST00000484134 DNMT1P26358 1616 aaKnown RBP26.61■■□□□ 1.85
RPUSD3-216ENST00000484134 MBD5Q9P267 1494 aa26.61■■□□□ 1.85
RPUSD3-216ENST00000484134 PZPP20742 1482 aa26.6■■□□□ 1.85
RPUSD3-216ENST00000484134 ZNF326Q5BKZ1 582 aaKnown RBP26.59■■□□□ 1.85
RPUSD3-216ENST00000484134 IQGAP2Q13576 1575 aa26.56■■□□□ 1.84
RPUSD3-216ENST00000484134 TMC1Q8TDI8 760 aa26.56■■□□□ 1.84
RPUSD3-216ENST00000484134 RTL5Q5HYW3 569 aaPredicted RBP26.52■■□□□ 1.84
RPUSD3-216ENST00000484134 KDM5CP41229 1560 aa26.52■■□□□ 1.84
RPUSD3-216ENST00000484134 DNAJC5BQ9UF47 199 aa26.51■■□□□ 1.84
RPUSD3-216ENST00000484134 ARID4BQ4LE39 1312 aaPredicted RBP26.5■■□□□ 1.83
RPUSD3-216ENST00000484134 LRPPRCP42704 1394 aaKnown RBP26.49■■□□□ 1.83
RPUSD3-216ENST00000484134 EXOC6Q8TAG9 804 aa26.49■■□□□ 1.83
RPUSD3-216ENST00000484134 TARBP1Q13395 1621 aaKnown RBP26.49■■□□□ 1.83
RPUSD3-216ENST00000484134 KIAA1107Q9UPP5 1409 aa26.47■■□□□ 1.83
RPUSD3-216ENST00000484134 RRP1P56182 461 aaKnown RBP26.47■■□□□ 1.83
RPUSD3-216ENST00000484134 NPM2Q86SE8 214 aaKnown RBP26.46■■□□□ 1.83
RPUSD3-216ENST00000484134 KIF14Q15058 1648 aa26.45■■□□□ 1.83
RPUSD3-216ENST00000484134 PKD2Q13563 968 aa26.45■■□□□ 1.83
RPUSD3-216ENST00000484134 ROCK2O75116 1388 aaKnown RBP26.42■■□□□ 1.82
RPUSD3-216ENST00000484134 KIF15Q9NS87 1388 aa26.42■■□□□ 1.82
RPUSD3-216ENST00000484134 PDE4AP27815 886 aa26.4■■□□□ 1.82
RPUSD3-216ENST00000484134 PBRM1Q86U86 1689 aa26.4■■□□□ 1.82
RPUSD3-216ENST00000484134 NUP153P49790 1475 aaKnown RBP26.4■■□□□ 1.82
RPUSD3-216ENST00000484134 TCERG1O14776 1098 aaKnown RBP26.4■■□□□ 1.82
RPUSD3-216ENST00000484134 BRD4O60885 1362 aaPredicted RBP26.39■■□□□ 1.81
RPUSD3-216ENST00000484134 RCAN3Q9UKA8 241 aa26.39■■□□□ 1.81
RPUSD3-216ENST00000484134 CARD11Q9BXL7 1154 aa26.38■■□□□ 1.81
RPUSD3-216ENST00000484134 MYBBP1AQ9BQG0 1328 aaKnown RBP26.38■■□□□ 1.81
RPUSD3-216ENST00000484134 SALL2Q9Y467 1007 aaPredicted RBP26.38■■□□□ 1.81
RPUSD3-216ENST00000484134 UHRF1BP1Q6BDS2 1440 aa26.37■■□□□ 1.81
RPUSD3-216ENST00000484134 PDS5BQ9NTI5 1447 aa26.37■■□□□ 1.81
RPUSD3-216ENST00000484134 ADAMTS12P58397 1594 aa26.36■■□□□ 1.81
RPUSD3-216ENST00000484134 RALGAPBQ86X10 1494 aa26.36■■□□□ 1.81
RPUSD3-216ENST00000484134 ST20-MTHFSA0A0A6YYL1 179 aa26.36■■□□□ 1.81
RPUSD3-216ENST00000484134 IL27Q8NEV9 243 aa26.36■■□□□ 1.81
RPUSD3-216ENST00000484134 BACH2Q9BYV9 841 aa26.36■■□□□ 1.81
RPUSD3-216ENST00000484134 LAS1LQ9Y4W2 734 aaKnown RBP26.36■■□□□ 1.81
RPUSD3-216ENST00000484134 CAMSAP2Q08AD1 1489 aa26.36■■□□□ 1.81
RPUSD3-216ENST00000484134 CFDP1Q9UEE9 299 aaPredicted RBP26.33■■□□□ 1.81
RPUSD3-216ENST00000484134 RALBP1Q15311 655 aa26.33■■□□□ 1.81
RPUSD3-216ENST00000484134 ANO8Q9HCE9 1232 aaPredicted RBP26.33■■□□□ 1.81
RPUSD3-216ENST00000484134 PRG4Q92954 1404 aaPredicted RBP26.32■■□□□ 1.8
RPUSD3-216ENST00000484134 DISP1Q96F81 1524 aa26.31■■□□□ 1.8
RPUSD3-216ENST00000484134 ZNF777Q9ULD5 760 aaPredicted RBP26.3■■□□□ 1.8
RPUSD3-216ENST00000484134 ADGBQ8N7X0 1667 aa26.3■■□□□ 1.8
RPUSD3-216ENST00000484134 NEFMP07197 916 aa26.3■■□□□ 1.8
RPUSD3-216ENST00000484134 KDM2AQ9Y2K7 1162 aa26.29■■□□□ 1.8
RPUSD3-216ENST00000484134 ADGRL2O95490 1459 aa26.29■■□□□ 1.8
RPUSD3-216ENST00000484134 CDCA7LQ96GN5 454 aa26.28■■□□□ 1.8
RPUSD3-216ENST00000484134 MS4A1P11836 297 aa26.27■■□□□ 1.8
RPUSD3-216ENST00000484134 KTN1Q86UP2 1357 aaKnown RBP26.27■■□□□ 1.8
RPUSD3-216ENST00000484134 KIAA0556O60303 1618 aa26.27■■□□□ 1.8
RPUSD3-216ENST00000484134 GPATCH8Q9UKJ3 1502 aaKnown RBP26.26■■□□□ 1.79
RPUSD3-216ENST00000484134 SKAP1Q86WV1 359 aa26.26■■□□□ 1.79
RPUSD3-216ENST00000484134 RAPGEF6Q8TEU7 1601 aa26.26■■□□□ 1.79
RPUSD3-216ENST00000484134 E9PCH4 1651 aa26.24■■□□□ 1.79
RPUSD3-216ENST00000484134 TROQ12816 1431 aaPredicted RBP26.24■■□□□ 1.79
RPUSD3-216ENST00000484134 ANKRD50Q9ULJ7 1429 aa26.24■■□□□ 1.79
RPUSD3-216ENST00000484134 PLIN1O60240 522 aa26.23■■□□□ 1.79
RPUSD3-216ENST00000484134 ANKRD30AQ9BXX3 1397 aa26.23■■□□□ 1.79
RPUSD3-216ENST00000484134 KIAA0586Q9BVV6 1533 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms