RNA–Protein interactions for RNA: ENST00000484049.6

CCNC-205, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-205ENST00000484049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
CCNC-205ENST00000484049 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
CCNC-205ENST00000484049 FHOD3Q2V2M9 1422 aa16.89■□□□□ 0.29
CCNC-205ENST00000484049 DENND4BO75064 1496 aaPredicted RBP16.89■□□□□ 0.29
CCNC-205ENST00000484049 AKNAQ7Z591 1439 aa16.88■□□□□ 0.29
CCNC-205ENST00000484049 FAM9AQ8IZU1 332 aaPredicted RBP16.88■□□□□ 0.29
CCNC-205ENST00000484049 YEATS2Q9ULM3 1422 aa16.87■□□□□ 0.29
CCNC-205ENST00000484049 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
CCNC-205ENST00000484049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCNC-205ENST00000484049 FANCAO15360 1455 aa16.85■□□□□ 0.29
CCNC-205ENST00000484049 TTC37Q6PGP7 1564 aa16.84■□□□□ 0.29
CCNC-205ENST00000484049 ZMYM4Q5VZL5 1548 aa16.84■□□□□ 0.29
CCNC-205ENST00000484049 RANGAP1P46060 587 aaPredicted RBP16.83■□□□□ 0.28
CCNC-205ENST00000484049 PLEKHD1A6NEE1 506 aa16.82■□□□□ 0.28
CCNC-205ENST00000484049 ZFYVE16Q7Z3T8 1539 aa16.81■□□□□ 0.28
CCNC-205ENST00000484049 CERKQ8TCT0 537 aa16.8■□□□□ 0.28
CCNC-205ENST00000484049 HECW1Q76N89 1606 aa16.8■□□□□ 0.28
CCNC-205ENST00000484049 CFAP74Q9C0B2 1584 aa16.79■□□□□ 0.28
CCNC-205ENST00000484049 MLECQ14165 292 aa16.79■□□□□ 0.28
CCNC-205ENST00000484049 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
CCNC-205ENST00000484049 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
CCNC-205ENST00000484049 POGZQ7Z3K3 1410 aa16.77■□□□□ 0.28
CCNC-205ENST00000484049 EFCAB5A4FU69 1503 aa16.77■□□□□ 0.28
CCNC-205ENST00000484049 FER1L4A9Z1Z3 1794 aa16.77■□□□□ 0.27
CCNC-205ENST00000484049 MAGI2Q86UL8 1455 aa16.76■□□□□ 0.27
CCNC-205ENST00000484049 CDK13Q14004 1512 aaKnown RBP16.76■□□□□ 0.27
CCNC-205ENST00000484049 SCAPERQ9BY12 1400 aa16.75■□□□□ 0.27
CCNC-205ENST00000484049 ARHGEF12Q9NZN5 1544 aa16.73■□□□□ 0.27
CCNC-205ENST00000484049 PLCH2O75038 1416 aa16.73■□□□□ 0.27
CCNC-205ENST00000484049 CEBPAP49715 358 aaPredicted RBP16.72■□□□□ 0.27
CCNC-205ENST00000484049 ATP10AO60312 1499 aa16.71■□□□□ 0.26
CCNC-205ENST00000484049 ILDR2Q71H61 639 aa16.7■□□□□ 0.26
CCNC-205ENST00000484049 STRCQ7RTU9 1775 aa16.7■□□□□ 0.26
CCNC-205ENST00000484049 PREX1Q8TCU6 1659 aa16.68■□□□□ 0.26
CCNC-205ENST00000484049 C9orf84Q5VXU9 1444 aa16.68■□□□□ 0.26
CCNC-205ENST00000484049 EEA1Q15075 1411 aa16.67■□□□□ 0.26
CCNC-205ENST00000484049 KIF14Q15058 1648 aa16.64■□□□□ 0.25
CCNC-205ENST00000484049 MYO5CQ9NQX4 1742 aa16.63■□□□□ 0.25
CCNC-205ENST00000484049 EFCAB2Q5VUJ9 269 aa16.62■□□□□ 0.25
CCNC-205ENST00000484049 AFAP1Q8N556 730 aa16.62■□□□□ 0.25
CCNC-205ENST00000484049 KDM5CP41229 1560 aa16.61■□□□□ 0.25
CCNC-205ENST00000484049 DISP3Q9P2K9 1392 aa16.6■□□□□ 0.25
CCNC-205ENST00000484049 SETD1BQ9UPS6 1966 aaKnown RBP16.6■□□□□ 0.25
CCNC-205ENST00000484049 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
CCNC-205ENST00000484049 ZNF518AQ6AHZ1 1483 aa16.58■□□□□ 0.25
CCNC-205ENST00000484049 ARHGAP35Q9NRY4 1499 aa16.57■□□□□ 0.24
CCNC-205ENST00000484049 UHRF1BP1Q6BDS2 1440 aa16.57■□□□□ 0.24
CCNC-205ENST00000484049 SOCS7O14512 581 aa16.57■□□□□ 0.24
CCNC-205ENST00000484049 ATP1B4Q9UN42 357 aaPredicted RBP16.57■□□□□ 0.24
CCNC-205ENST00000484049 ABCA6Q8N139 1617 aa16.57■□□□□ 0.24
CCNC-205ENST00000484049 LRRIQ1Q96JM4 1722 aa16.57■□□□□ 0.24
CCNC-205ENST00000484049 C3P01024 1663 aa16.56■□□□□ 0.24
CCNC-205ENST00000484049 REREQ9P2R6 1566 aa16.55■□□□□ 0.24
CCNC-205ENST00000484049 PTPRTO14522 1441 aa16.55■□□□□ 0.24
CCNC-205ENST00000484049 TROQ12816 1431 aaPredicted RBP16.55■□□□□ 0.24
CCNC-205ENST00000484049 ARHGAP5Q13017 1502 aa16.55■□□□□ 0.24
CCNC-205ENST00000484049 LTBP4Q8N2S1 1624 aa16.55■□□□□ 0.24
CCNC-205ENST00000484049 CDC42BPBQ9Y5S2 1711 aa16.55■□□□□ 0.24
CCNC-205ENST00000484049 EHMT2Q96KQ7 1210 aa16.54■□□□□ 0.24
CCNC-205ENST00000484049 FMN1Q68DA7 1419 aa16.53■□□□□ 0.24
CCNC-205ENST00000484049 TRAPPC8Q9Y2L5 1435 aa16.52■□□□□ 0.24
CCNC-205ENST00000484049 MLH3Q9UHC1 1453 aa16.52■□□□□ 0.24
CCNC-205ENST00000484049 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
CCNC-205ENST00000484049 AGLP35573 1532 aa16.5■□□□□ 0.23
CCNC-205ENST00000484049 SPATA31D1Q6ZQQ2 1576 aa16.49■□□□□ 0.23
CCNC-205ENST00000484049 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
CCNC-205ENST00000484049 UBTFP17480 764 aaKnown RBP16.48■□□□□ 0.23
CCNC-205ENST00000484049 MYT1LQ9UL68 1186 aa16.48■□□□□ 0.23
CCNC-205ENST00000484049 ABCC1P33527 1531 aa16.48■□□□□ 0.23
CCNC-205ENST00000484049 KIDINS220Q9ULH0 1771 aa16.48■□□□□ 0.23
CCNC-205ENST00000484049 NCOA1Q15788 1441 aa16.48■□□□□ 0.23
CCNC-205ENST00000484049 ITSN2Q9NZM3 1697 aa16.47■□□□□ 0.23
CCNC-205ENST00000484049 PREX2Q70Z35 1606 aa16.46■□□□□ 0.23
CCNC-205ENST00000484049 CLIP1P30622 1438 aa16.45■□□□□ 0.22
CCNC-205ENST00000484049 IQSEC2Q5JU85 1478 aa16.43■□□□□ 0.22
CCNC-205ENST00000484049 CDC42BPAQ5VT25 1732 aa16.41■□□□□ 0.22
CCNC-205ENST00000484049 CAMSAP1Q5T5Y3 1602 aa16.41■□□□□ 0.22
CCNC-205ENST00000484049 CNTLNQ9NXG0 1405 aa16.4■□□□□ 0.22
CCNC-205ENST00000484049 NCKAP5LQ9HCH0 1330 aa16.4■□□□□ 0.22
CCNC-205ENST00000484049 SAMD9LQ8IVG5 1584 aa16.4■□□□□ 0.22
CCNC-205ENST00000484049 ESF1Q9H501 851 aaKnown RBP16.39■□□□□ 0.21
CCNC-205ENST00000484049 MROH2AA6NES4 1674 aa16.39■□□□□ 0.21
CCNC-205ENST00000484049 ZMYM3Q14202 1370 aa16.39■□□□□ 0.21
CCNC-205ENST00000484049 NPATQ14207 1427 aa16.38■□□□□ 0.21
CCNC-205ENST00000484049 ZNF335Q9H4Z2 1342 aaPredicted RBP16.38■□□□□ 0.21
CCNC-205ENST00000484049 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
CCNC-205ENST00000484049 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
CCNC-205ENST00000484049 CAPN15O75808 1086 aa16.36■□□□□ 0.21
CCNC-205ENST00000484049 SUPT6HQ7KZ85 1726 aaKnown RBP16.35■□□□□ 0.21
CCNC-205ENST00000484049 HNRNPMP52272 730 aaKnown RBP eCLIP16.34■□□□□ 0.218e-10■■■■□ 20.8
CCNC-205ENST00000484049 SYCP2Q9BX26 1530 aa16.34■□□□□ 0.21
CCNC-205ENST00000484049 CCDC18Q5T9S5 1454 aa16.33■□□□□ 0.21
CCNC-205ENST00000484049 CLTCQ00610 1675 aaKnown RBP16.33■□□□□ 0.21
CCNC-205ENST00000484049 PTPRKQ15262 1439 aa16.32■□□□□ 0.2
CCNC-205ENST00000484049 GPATCH8Q9UKJ3 1502 aaKnown RBP16.32■□□□□ 0.2
CCNC-205ENST00000484049 MYO3AQ8NEV4 1616 aa16.32■□□□□ 0.2
CCNC-205ENST00000484049 DSG3P32926 999 aa16.32■□□□□ 0.2
CCNC-205ENST00000484049 ZNF777Q9ULD5 760 aaPredicted RBP16.32■□□□□ 0.2
CCNC-205ENST00000484049 PLXNC1O60486 1568 aa16.32■□□□□ 0.2
CCNC-205ENST00000484049 ZNF142P52746 1687 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms