RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CDK13Q14004 1512 aaKnown RBP18.44■□□□□ 0.54
SMARCC1-205ENST00000483847 SCAPERQ9BY12 1400 aa18.43■□□□□ 0.54
SMARCC1-205ENST00000483847 ARHGEF12Q9NZN5 1544 aa18.42■□□□□ 0.54
SMARCC1-205ENST00000483847 PREX1Q8TCU6 1659 aa18.41■□□□□ 0.54
SMARCC1-205ENST00000483847 PLCH2O75038 1416 aa18.4■□□□□ 0.54
SMARCC1-205ENST00000483847 CEBPAP49715 358 aaPredicted RBP18.39■□□□□ 0.53
SMARCC1-205ENST00000483847 ATP10AO60312 1499 aa18.39■□□□□ 0.53
SMARCC1-205ENST00000483847 ILDR2Q71H61 639 aa18.37■□□□□ 0.53
SMARCC1-205ENST00000483847 C9orf84Q5VXU9 1444 aa18.37■□□□□ 0.53
SMARCC1-205ENST00000483847 STRCQ7RTU9 1775 aa18.37■□□□□ 0.53
SMARCC1-205ENST00000483847 DISP3Q9P2K9 1392 aa18.34■□□□□ 0.53
SMARCC1-205ENST00000483847 MYO5CQ9NQX4 1742 aa18.34■□□□□ 0.53
SMARCC1-205ENST00000483847 EEA1Q15075 1411 aa18.33■□□□□ 0.53
SMARCC1-205ENST00000483847 KIF14Q15058 1648 aa18.31■□□□□ 0.52
SMARCC1-205ENST00000483847 EFCAB2Q5VUJ9 269 aa18.3■□□□□ 0.52
SMARCC1-205ENST00000483847 ATP1B4Q9UN42 357 aaPredicted RBP18.28■□□□□ 0.52
SMARCC1-205ENST00000483847 UHRF1BP1Q6BDS2 1440 aa18.28■□□□□ 0.52
SMARCC1-205ENST00000483847 KDM5CP41229 1560 aa18.28■□□□□ 0.52
SMARCC1-205ENST00000483847 ZNF518AQ6AHZ1 1483 aa18.27■□□□□ 0.52
SMARCC1-205ENST00000483847 DIP2CQ9Y2E4 1556 aa18.27■□□□□ 0.52
SMARCC1-205ENST00000483847 SOCS7O14512 581 aa18.27■□□□□ 0.52
SMARCC1-205ENST00000483847 AFAP1Q8N556 730 aa18.27■□□□□ 0.52
SMARCC1-205ENST00000483847 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
SMARCC1-205ENST00000483847 C3P01024 1663 aa18.25■□□□□ 0.51
SMARCC1-205ENST00000483847 ARHGAP5Q13017 1502 aa18.24■□□□□ 0.51
SMARCC1-205ENST00000483847 ABCA6Q8N139 1617 aa18.23■□□□□ 0.51
SMARCC1-205ENST00000483847 SETD1BQ9UPS6 1966 aaKnown RBP18.23■□□□□ 0.51
SMARCC1-205ENST00000483847 SPATA31D1Q6ZQQ2 1576 aa18.22■□□□□ 0.51
SMARCC1-205ENST00000483847 REREQ9P2R6 1566 aa18.21■□□□□ 0.51
SMARCC1-205ENST00000483847 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
SMARCC1-205ENST00000483847 MYT1LQ9UL68 1186 aa18.21■□□□□ 0.51
SMARCC1-205ENST00000483847 PTPRTO14522 1441 aa18.21■□□□□ 0.51
SMARCC1-205ENST00000483847 TROQ12816 1431 aaPredicted RBP18.21■□□□□ 0.51
SMARCC1-205ENST00000483847 FMN1Q68DA7 1419 aa18.21■□□□□ 0.51
SMARCC1-205ENST00000483847 LRRIQ1Q96JM4 1722 aa18.2■□□□□ 0.5
SMARCC1-205ENST00000483847 ARHGAP35Q9NRY4 1499 aa18.2■□□□□ 0.5
SMARCC1-205ENST00000483847 LTBP4Q8N2S1 1624 aa18.2■□□□□ 0.5
SMARCC1-205ENST00000483847 CDK11AQ9UQ88 783 aaPredicted RBP18.19■□□□□ 0.5
SMARCC1-205ENST00000483847 CDC42BPBQ9Y5S2 1711 aa18.19■□□□□ 0.5
SMARCC1-205ENST00000483847 MLH3Q9UHC1 1453 aa18.18■□□□□ 0.5
SMARCC1-205ENST00000483847 TRAPPC8Q9Y2L5 1435 aa18.16■□□□□ 0.5
SMARCC1-205ENST00000483847 AGLP35573 1532 aa18.16■□□□□ 0.5
SMARCC1-205ENST00000483847 UBTFP17480 764 aaKnown RBP18.15■□□□□ 0.5
SMARCC1-205ENST00000483847 CLIP1P30622 1438 aa18.15■□□□□ 0.5
SMARCC1-205ENST00000483847 NCOA1Q15788 1441 aa18.14■□□□□ 0.49
SMARCC1-205ENST00000483847 ABCC1P33527 1531 aa18.13■□□□□ 0.49
SMARCC1-205ENST00000483847 PREX2Q70Z35 1606 aa18.13■□□□□ 0.49
SMARCC1-205ENST00000483847 ITSN2Q9NZM3 1697 aa18.13■□□□□ 0.49
SMARCC1-205ENST00000483847 KIDINS220Q9ULH0 1771 aa18.12■□□□□ 0.49
SMARCC1-205ENST00000483847 ESF1Q9H501 851 aaKnown RBP18.12■□□□□ 0.49
SMARCC1-205ENST00000483847 IQSEC2Q5JU85 1478 aa18.1■□□□□ 0.49
SMARCC1-205ENST00000483847 CAMSAP1Q5T5Y3 1602 aa18.09■□□□□ 0.49
SMARCC1-205ENST00000483847 CNTLNQ9NXG0 1405 aa18.07■□□□□ 0.48
SMARCC1-205ENST00000483847 CDC42BPAQ5VT25 1732 aa18.06■□□□□ 0.48
SMARCC1-205ENST00000483847 MROH2AA6NES4 1674 aa18.05■□□□□ 0.48
SMARCC1-205ENST00000483847 SAMD9LQ8IVG5 1584 aa18.04■□□□□ 0.48
SMARCC1-205ENST00000483847 NPATQ14207 1427 aa18.04■□□□□ 0.48
SMARCC1-205ENST00000483847 ZNF335Q9H4Z2 1342 aaPredicted RBP18.03■□□□□ 0.48
SMARCC1-205ENST00000483847 NCKAP5LQ9HCH0 1330 aa18.03■□□□□ 0.48
SMARCC1-205ENST00000483847 ZMYM3Q14202 1370 aa18.02■□□□□ 0.47
SMARCC1-205ENST00000483847 SUPT6HQ7KZ85 1726 aaKnown RBP18.01■□□□□ 0.47
SMARCC1-205ENST00000483847 CLTCQ00610 1675 aaKnown RBP18■□□□□ 0.47
SMARCC1-205ENST00000483847 CASKIN1Q8WXD9 1431 aa18■□□□□ 0.47
SMARCC1-205ENST00000483847 CCDC18Q5T9S5 1454 aa18■□□□□ 0.47
SMARCC1-205ENST00000483847 SYCP2Q9BX26 1530 aa17.99■□□□□ 0.47
SMARCC1-205ENST00000483847 MYO3AQ8NEV4 1616 aa17.99■□□□□ 0.47
SMARCC1-205ENST00000483847 UBAP1LF5GYI3 381 aa17.99■□□□□ 0.47
SMARCC1-205ENST00000483847 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
SMARCC1-205ENST00000483847 ZNF142P52746 1687 aaPredicted RBP17.98■□□□□ 0.47
SMARCC1-205ENST00000483847 SPAG9O60271 1321 aaKnown RBP17.97■□□□□ 0.47
SMARCC1-205ENST00000483847 HNRNPMP52272 730 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMARCC1-205ENST00000483847 PLXNC1O60486 1568 aa17.96■□□□□ 0.46
SMARCC1-205ENST00000483847 CEP170BQ9Y4F5 1589 aaPredicted RBP17.96■□□□□ 0.46
SMARCC1-205ENST00000483847 ATP7AQ04656 1500 aa17.95■□□□□ 0.46
SMARCC1-205ENST00000483847 PTPRKQ15262 1439 aa17.95■□□□□ 0.46
SMARCC1-205ENST00000483847 PLA2R1Q13018 1463 aa17.95■□□□□ 0.46
SMARCC1-205ENST00000483847 TCOF1Q13428 1488 aaKnown RBP17.95■□□□□ 0.46
SMARCC1-205ENST00000483847 GPATCH8Q9UKJ3 1502 aaKnown RBP17.94■□□□□ 0.46
SMARCC1-205ENST00000483847 INO80Q9ULG1 1556 aaPredicted RBP17.94■□□□□ 0.46
SMARCC1-205ENST00000483847 PKD2Q13563 968 aa17.92■□□□□ 0.46
SMARCC1-205ENST00000483847 A2MP01023 1474 aa17.92■□□□□ 0.46
SMARCC1-205ENST00000483847 FYCO1Q9BQS8 1478 aa17.89■□□□□ 0.45
SMARCC1-205ENST00000483847 GGT6Q6P531 493 aa17.89■□□□□ 0.45
SMARCC1-205ENST00000483847 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
SMARCC1-205ENST00000483847 KIAA1107Q9UPP5 1409 aa17.88■□□□□ 0.45
SMARCC1-205ENST00000483847 DNMT1P26358 1616 aaKnown RBP17.86■□□□□ 0.45
SMARCC1-205ENST00000483847 A2ML1A8K2U0 1454 aa17.85■□□□□ 0.45
SMARCC1-205ENST00000483847 HSPA1LP34931 641 aa17.85■□□□□ 0.45
SMARCC1-205ENST00000483847 CFDP1Q9UEE9 299 aaPredicted RBP17.85■□□□□ 0.45
SMARCC1-205ENST00000483847 ADGBQ8N7X0 1667 aa17.84■□□□□ 0.45
SMARCC1-205ENST00000483847 MED1Q15648 1581 aaPredicted RBP17.84■□□□□ 0.45
SMARCC1-205ENST00000483847 PLEKHH2Q8IVE3 1493 aa17.84■□□□□ 0.45
SMARCC1-205ENST00000483847 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
SMARCC1-205ENST00000483847 PIP4K2BP78356 416 aa17.83■□□□□ 0.44
SMARCC1-205ENST00000483847 NEURL4Q96JN8 1562 aa17.83■□□□□ 0.44
SMARCC1-205ENST00000483847 CCNB3Q8WWL7 1395 aa17.82■□□□□ 0.44
SMARCC1-205ENST00000483847 POLR1AO95602 1720 aaPredicted RBP17.81■□□□□ 0.44
SMARCC1-205ENST00000483847 ZNF644Q9H582 1327 aaPredicted RBP17.81■□□□□ 0.44
SMARCC1-205ENST00000483847 FBXO31Q5XUX0 539 aaPredicted RBP17.79■□□□□ 0.44
SMARCC1-205ENST00000483847 CPS1P31327 1500 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms