RNA–Protein interactions for RNA: ENST00000483564.5

GABRE-208, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 2,747 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-208ENST00000483564 EIF4G2P78344 907 aaKnown RBP eCLIP12.38□□□□□ -0.43
GABRE-208ENST00000483564 USP35Q9P2H5 1018 aa12.36□□□□□ -0.43
GABRE-208ENST00000483564 CNTLNQ9NXG0 1405 aa12.36□□□□□ -0.43
GABRE-208ENST00000483564 GSE1Q14687 1217 aa12.36□□□□□ -0.43
GABRE-208ENST00000483564 NUDCQ9Y266 331 aa12.35□□□□□ -0.43
GABRE-208ENST00000483564 GRIN2BQ13224 1484 aa12.35□□□□□ -0.43
GABRE-208ENST00000483564 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■□□ 18.3
GABRE-208ENST00000483564 PDE4AP27815 886 aa12.34□□□□□ -0.43
GABRE-208ENST00000483564 KDM5BQ9UGL1 1544 aa12.34□□□□□ -0.43
GABRE-208ENST00000483564 RNF123Q5XPI4 1314 aa12.34□□□□□ -0.43
GABRE-208ENST00000483564 CTTNBP2Q8WZ74 1663 aa12.33□□□□□ -0.44
GABRE-208ENST00000483564 PTPRKQ15262 1439 aa12.32□□□□□ -0.44
GABRE-208ENST00000483564 SMG6Q86US8 1419 aaKnown RBP12.32□□□□□ -0.44
GABRE-208ENST00000483564 SKAP1Q86WV1 359 aa12.32□□□□□ -0.44
GABRE-208ENST00000483564 CCDC18Q5T9S5 1454 aa12.32□□□□□ -0.44
GABRE-208ENST00000483564 SLC4A3P48751 1232 aa12.31□□□□□ -0.44
GABRE-208ENST00000483564 CCDC7Q96M83 1385 aa12.31□□□□□ -0.44
GABRE-208ENST00000483564 FRAT1Q92837 279 aaPredicted RBP12.31□□□□□ -0.44
GABRE-208ENST00000483564 EXOC6Q8TAG9 804 aa12.31□□□□□ -0.44
GABRE-208ENST00000483564 ZNF608Q9ULD9 1512 aaPredicted RBP12.3□□□□□ -0.44
GABRE-208ENST00000483564 ADAMTS12P58397 1594 aa12.3□□□□□ -0.44
GABRE-208ENST00000483564 UACAQ9BZF9 1416 aa12.3□□□□□ -0.44
GABRE-208ENST00000483564 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
GABRE-208ENST00000483564 BACH2Q9BYV9 841 aa12.3□□□□□ -0.44
GABRE-208ENST00000483564 NCOA2Q15596 1464 aa12.3□□□□□ -0.44
GABRE-208ENST00000483564 PPM1GO15355 546 aaPredicted RBP12.29□□□□□ -0.44
GABRE-208ENST00000483564 L3MBTL2Q969R5 705 aa12.29□□□□□ -0.44
GABRE-208ENST00000483564 MAP3K1Q13233 1512 aa12.29□□□□□ -0.44
GABRE-208ENST00000483564 FOXD1Q16676 465 aa12.29□□□□□ -0.44
GABRE-208ENST00000483564 FAM43AQ8N2R8 423 aa12.29□□□□□ -0.44
GABRE-208ENST00000483564 NFKBIBQ15653 356 aa12.28□□□□□ -0.44
GABRE-208ENST00000483564 POLR3GLQ9BT43 218 aa12.27□□□□□ -0.44
GABRE-208ENST00000483564 EFCAB5A4FU69 1503 aa12.27□□□□□ -0.44
GABRE-208ENST00000483564 KIF7Q2M1P5 1343 aa12.27□□□□□ -0.45
GABRE-208ENST00000483564 HSP90AA2PQ14568 343 aaPredicted RBP12.27□□□□□ -0.45
GABRE-208ENST00000483564 RRP7BPQ9NSQ0 103 aa12.27□□□□□ -0.45
GABRE-208ENST00000483564 TCERG1O14776 1098 aaKnown RBP12.26□□□□□ -0.45
GABRE-208ENST00000483564 CHIC2Q9UKJ5 165 aa12.26□□□□□ -0.45
GABRE-208ENST00000483564 NCOA1Q15788 1441 aa12.26□□□□□ -0.45
GABRE-208ENST00000483564 RBM10P98175 930 aaKnown RBP12.25□□□□□ -0.45
GABRE-208ENST00000483564 NBPF8Q3BBV2 869 aa12.25□□□□□ -0.45
GABRE-208ENST00000483564 MAGI1Q96QZ7 1491 aaPredicted RBP12.25□□□□□ -0.45
GABRE-208ENST00000483564 DCAF11Q8TEB1 546 aa12.25□□□□□ -0.45
GABRE-208ENST00000483564 HFM1A2PYH4 1435 aa12.24□□□□□ -0.45
GABRE-208ENST00000483564 NAIPQ13075 1403 aa12.23□□□□□ -0.45
GABRE-208ENST00000483564 SNAPC4Q5SXM2 1469 aa12.23□□□□□ -0.45
GABRE-208ENST00000483564 FGD6Q6ZV73 1430 aa12.22□□□□□ -0.45
GABRE-208ENST00000483564 RRP1P56182 461 aaKnown RBP12.21□□□□□ -0.45
GABRE-208ENST00000483564 FHOD3Q2V2M9 1422 aa12.21□□□□□ -0.45
GABRE-208ENST00000483564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.45
GABRE-208ENST00000483564 NAP1L5Q96NT1 182 aaPredicted RBP12.2□□□□□ -0.46
GABRE-208ENST00000483564 PNISRQ8TF01 805 aaKnown RBP12.2□□□□□ -0.46
GABRE-208ENST00000483564 AAMPQ13685 434 aa12.19□□□□□ -0.46
GABRE-208ENST00000483564 RRAGDQ9NQL2 400 aaPredicted RBP12.19□□□□□ -0.46
GABRE-208ENST00000483564 PCF11O94913 1555 aaKnown RBP12.19□□□□□ -0.46
GABRE-208ENST00000483564 SYNJ2O15056 1496 aa12.19□□□□□ -0.46
GABRE-208ENST00000483564 SAMD9Q5K651 1589 aa12.19□□□□□ -0.46
GABRE-208ENST00000483564 FGD1P98174 961 aa12.19□□□□□ -0.46
GABRE-208ENST00000483564 DENND4BO75064 1496 aaPredicted RBP12.19□□□□□ -0.46
GABRE-208ENST00000483564 GRIN2AQ12879 1464 aa12.19□□□□□ -0.46
GABRE-208ENST00000483564 PTPN23Q9H3S7 1636 aa12.18□□□□□ -0.46
GABRE-208ENST00000483564 FRAT2O75474 233 aaPredicted RBP12.18□□□□□ -0.46
GABRE-208ENST00000483564 IQGAP2Q13576 1575 aa12.18□□□□□ -0.46
GABRE-208ENST00000483564 PLIN1O60240 522 aa12.18□□□□□ -0.46
GABRE-208ENST00000483564 FMN1Q68DA7 1419 aa12.17□□□□□ -0.46
GABRE-208ENST00000483564 MS4A1P11836 297 aa12.17□□□□□ -0.46
GABRE-208ENST00000483564 PDE4CQ08493 712 aa12.17□□□□□ -0.46
GABRE-208ENST00000483564 TMC1Q8TDI8 760 aa12.17□□□□□ -0.46
GABRE-208ENST00000483564 MPHOSPH9Q99550 1183 aa12.17□□□□□ -0.46
GABRE-208ENST00000483564 DHX29Q7Z478 1369 aaKnown RBP12.17□□□□□ -0.46
GABRE-208ENST00000483564 HSP90AA1P07900 732 aaKnown RBP12.17□□□□□ -0.46
GABRE-208ENST00000483564 RRP9O43818 475 aaKnown RBP12.16□□□□□ -0.46
GABRE-208ENST00000483564 RCAN3Q9UKA8 241 aa12.16□□□□□ -0.46
GABRE-208ENST00000483564 KIAA0586Q9BVV6 1533 aa12.15□□□□□ -0.46
GABRE-208ENST00000483564 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
GABRE-208ENST00000483564 DDRGK1Q96HY6 314 aa12.15□□□□□ -0.47
GABRE-208ENST00000483564 MTUS2Q5JR59 1369 aa12.14□□□□□ -0.47
GABRE-208ENST00000483564 UGGT2Q9NYU1 1516 aa12.13□□□□□ -0.47
GABRE-208ENST00000483564 ARID4BQ4LE39 1312 aaPredicted RBP12.13□□□□□ -0.47
GABRE-208ENST00000483564 SPATA31E1Q6ZUB1 1445 aa12.13□□□□□ -0.47
GABRE-208ENST00000483564 CDCA7LQ96GN5 454 aa12.13□□□□□ -0.47
GABRE-208ENST00000483564 FYCO1Q9BQS8 1478 aa12.12□□□□□ -0.47
GABRE-208ENST00000483564 CFAP43Q8NDM7 1665 aa12.12□□□□□ -0.47
GABRE-208ENST00000483564 CASKIN1Q8WXD9 1431 aa12.12□□□□□ -0.47
GABRE-208ENST00000483564 ZNF326Q5BKZ1 582 aaKnown RBP12.11□□□□□ -0.47
GABRE-208ENST00000483564 NUP160Q12769 1436 aa12.1□□□□□ -0.47
GABRE-208ENST00000483564 CRBNQ96SW2 442 aa12.1□□□□□ -0.47
GABRE-208ENST00000483564 CEP170Q5SW79 1584 aa12.09□□□□□ -0.47
GABRE-208ENST00000483564 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
GABRE-208ENST00000483564 PNNQ9H307 717 aaKnown RBP12.08□□□□□ -0.48
GABRE-208ENST00000483564 FBLN2P98095 1184 aa12.07□□□□□ -0.48
GABRE-208ENST00000483564 ARXQ96QS3 562 aa12.07□□□□□ -0.48
GABRE-208ENST00000483564 POGKQ9P215 609 aa12.07□□□□□ -0.48
GABRE-208ENST00000483564 C20orf194Q5TEA3 1177 aa12.07□□□□□ -0.48
GABRE-208ENST00000483564 RGS3P49796 1198 aa12.06□□□□□ -0.48
GABRE-208ENST00000483564 AEBP2Q6ZN18 517 aaPredicted RBP12.06□□□□□ -0.48
GABRE-208ENST00000483564 MYOM3Q5VTT5 1437 aa12.06□□□□□ -0.48
GABRE-208ENST00000483564 KDM6BO15054 1643 aa12.06□□□□□ -0.48
GABRE-208ENST00000483564 KIAA0556O60303 1618 aa12.05□□□□□ -0.48
GABRE-208ENST00000483564 ANKRD30BQ9BXX2 1392 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms