RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 CDK11AQ9UQ88 783 aaPredicted RBP19.06■□□□□ 0.64
TSPAN1-208ENST00000482928 ABCA8O94911 1581 aa19.06■□□□□ 0.64
TSPAN1-208ENST00000482928 NUP153P49790 1475 aaKnown RBP19.05■□□□□ 0.64
TSPAN1-208ENST00000482928 YEATS2Q9ULM3 1422 aa19.05■□□□□ 0.64
TSPAN1-208ENST00000482928 UHRF1BP1LA0JNW5 1464 aa19.04■□□□□ 0.64
TSPAN1-208ENST00000482928 CDK13Q14004 1512 aaKnown RBP19.04■□□□□ 0.64
TSPAN1-208ENST00000482928 EHBP1L1Q8N3D4 1523 aa19.04■□□□□ 0.64
TSPAN1-208ENST00000482928 UACAQ9BZF9 1416 aa19.03■□□□□ 0.64
TSPAN1-208ENST00000482928 PREX1Q8TCU6 1659 aa19.03■□□□□ 0.64
TSPAN1-208ENST00000482928 LTBP4Q8N2S1 1624 aa19.02■□□□□ 0.64
TSPAN1-208ENST00000482928 CD109Q6YHK3 1445 aa19■□□□□ 0.63
TSPAN1-208ENST00000482928 KDM5BQ9UGL1 1544 aa18.99■□□□□ 0.63
TSPAN1-208ENST00000482928 SUPT6HQ7KZ85 1726 aaKnown RBP18.98■□□□□ 0.63
TSPAN1-208ENST00000482928 ARAP3Q8WWN8 1544 aa18.97■□□□□ 0.63
TSPAN1-208ENST00000482928 WDR7Q9Y4E6 1490 aa18.97■□□□□ 0.63
TSPAN1-208ENST00000482928 UBAP1LF5GYI3 381 aa18.94■□□□□ 0.62
TSPAN1-208ENST00000482928 PLEKHD1A6NEE1 506 aa18.93■□□□□ 0.62
TSPAN1-208ENST00000482928 ATP10BO94823 1461 aa18.91■□□□□ 0.62
TSPAN1-208ENST00000482928 FER1L4A9Z1Z3 1794 aa18.91■□□□□ 0.62
TSPAN1-208ENST00000482928 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
TSPAN1-208ENST00000482928 PTPRTO14522 1441 aa18.9■□□□□ 0.62
TSPAN1-208ENST00000482928 TROQ12816 1431 aaPredicted RBP18.9■□□□□ 0.62
TSPAN1-208ENST00000482928 PHLDB1Q86UU1 1377 aa18.87■□□□□ 0.61
TSPAN1-208ENST00000482928 CCNB3Q8WWL7 1395 aa18.87■□□□□ 0.61
TSPAN1-208ENST00000482928 TTC37Q6PGP7 1564 aa18.86■□□□□ 0.61
TSPAN1-208ENST00000482928 RRBP1Q9P2E9 1410 aaKnown RBP18.86■□□□□ 0.61
TSPAN1-208ENST00000482928 KIF14Q15058 1648 aa18.85■□□□□ 0.61
TSPAN1-208ENST00000482928 MYOM3Q5VTT5 1437 aa18.83■□□□□ 0.61
TSPAN1-208ENST00000482928 FAM50AQ14320 339 aaKnown RBP18.83■□□□□ 0.6
TSPAN1-208ENST00000482928 ARHGEF40Q8TER5 1519 aa18.83■□□□□ 0.6
TSPAN1-208ENST00000482928 HSPA1LP34931 641 aa18.81■□□□□ 0.6
TSPAN1-208ENST00000482928 FGD6Q6ZV73 1430 aa18.81■□□□□ 0.6
TSPAN1-208ENST00000482928 POGZQ7Z3K3 1410 aa18.79■□□□□ 0.6
TSPAN1-208ENST00000482928 FRMPD1Q5SYB0 1578 aa18.79■□□□□ 0.6
TSPAN1-208ENST00000482928 ITSN2Q9NZM3 1697 aa18.79■□□□□ 0.6
TSPAN1-208ENST00000482928 RAPGEF3O95398 923 aa18.77■□□□□ 0.6
TSPAN1-208ENST00000482928 FANCAO15360 1455 aa18.77■□□□□ 0.59
TSPAN1-208ENST00000482928 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
TSPAN1-208ENST00000482928 ITGAEP38570 1179 aa18.75■□□□□ 0.59
TSPAN1-208ENST00000482928 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
TSPAN1-208ENST00000482928 UHRF1BP1Q6BDS2 1440 aa18.74■□□□□ 0.59
TSPAN1-208ENST00000482928 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
TSPAN1-208ENST00000482928 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
TSPAN1-208ENST00000482928 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.73■□□□□ 0.59
TSPAN1-208ENST00000482928 CFDP1Q9UEE9 299 aaPredicted RBP18.71■□□□□ 0.59
TSPAN1-208ENST00000482928 SIGLEC1Q9BZZ2 1709 aa18.71■□□□□ 0.59
TSPAN1-208ENST00000482928 TCOF1Q13428 1488 aaKnown RBP18.67■□□□□ 0.58
TSPAN1-208ENST00000482928 SETD1AO15047 1707 aaKnown RBP18.67■□□□□ 0.58
TSPAN1-208ENST00000482928 GPATCH8Q9UKJ3 1502 aaKnown RBP18.67■□□□□ 0.58
TSPAN1-208ENST00000482928 PIP4K2BP78356 416 aa18.66■□□□□ 0.58
TSPAN1-208ENST00000482928 ZNF777Q9ULD5 760 aaPredicted RBP18.66■□□□□ 0.58
TSPAN1-208ENST00000482928 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
TSPAN1-208ENST00000482928 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.64■□□□□ 0.58
TSPAN1-208ENST00000482928 MYO5CQ9NQX4 1742 aa18.64■□□□□ 0.57
TSPAN1-208ENST00000482928 MLECQ14165 292 aa18.64■□□□□ 0.57
TSPAN1-208ENST00000482928 SETD1BQ9UPS6 1966 aaKnown RBP18.64■□□□□ 0.57
TSPAN1-208ENST00000482928 PREX2Q70Z35 1606 aa18.63■□□□□ 0.57
TSPAN1-208ENST00000482928 CAMSAP2Q08AD1 1489 aa18.62■□□□□ 0.57
TSPAN1-208ENST00000482928 ARHGAP5Q13017 1502 aa18.62■□□□□ 0.57
TSPAN1-208ENST00000482928 ZNF335Q9H4Z2 1342 aaPredicted RBP18.6■□□□□ 0.57
TSPAN1-208ENST00000482928 NEO1Q92859 1461 aa18.59■□□□□ 0.57
TSPAN1-208ENST00000482928 AKNAQ7Z591 1439 aa18.59■□□□□ 0.57
TSPAN1-208ENST00000482928 RICTORQ6R327 1708 aa18.59■□□□□ 0.57
TSPAN1-208ENST00000482928 CEBPAP49715 358 aaPredicted RBP18.58■□□□□ 0.56
TSPAN1-208ENST00000482928 RGS17Q9UGC6 210 aaPredicted RBP18.57■□□□□ 0.56
TSPAN1-208ENST00000482928 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
TSPAN1-208ENST00000482928 CDC42BPBQ9Y5S2 1711 aa18.56■□□□□ 0.56
TSPAN1-208ENST00000482928 ABCA9Q8IUA7 1624 aa18.56■□□□□ 0.56
TSPAN1-208ENST00000482928 ZNF644Q9H582 1327 aaPredicted RBP18.55■□□□□ 0.56
TSPAN1-208ENST00000482928 ARHGEF12Q9NZN5 1544 aa18.55■□□□□ 0.56
TSPAN1-208ENST00000482928 EFCAB2Q5VUJ9 269 aa18.55■□□□□ 0.56
TSPAN1-208ENST00000482928 DNMT1P26358 1616 aaKnown RBP18.55■□□□□ 0.56
TSPAN1-208ENST00000482928 PLCH2O75038 1416 aa18.55■□□□□ 0.56
TSPAN1-208ENST00000482928 PLEKHH2Q8IVE3 1493 aa18.54■□□□□ 0.56
TSPAN1-208ENST00000482928 DAPK1P53355 1430 aa18.54■□□□□ 0.56
TSPAN1-208ENST00000482928 CCER1Q8TC90 406 aaPredicted RBP18.53■□□□□ 0.56
TSPAN1-208ENST00000482928 ZFYVE16Q7Z3T8 1539 aa18.53■□□□□ 0.56
TSPAN1-208ENST00000482928 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
TSPAN1-208ENST00000482928 SAMD9LQ8IVG5 1584 aa18.51■□□□□ 0.55
TSPAN1-208ENST00000482928 TOM1O60784 492 aa18.5■□□□□ 0.55
TSPAN1-208ENST00000482928 CHIC2Q9UKJ5 165 aa18.5■□□□□ 0.55
TSPAN1-208ENST00000482928 RSPH4AQ5TD94 716 aa18.49■□□□□ 0.55
TSPAN1-208ENST00000482928 ABCC5O15440 1437 aa18.49■□□□□ 0.55
TSPAN1-208ENST00000482928 TSPY4P0CV99 314 aa18.48■□□□□ 0.55
TSPAN1-208ENST00000482928 TSPY10P0CW01 314 aa18.48■□□□□ 0.55
TSPAN1-208ENST00000482928 PTPRKQ15262 1439 aa18.48■□□□□ 0.55
TSPAN1-208ENST00000482928 CROCC2H7BZ55 1655 aa18.47■□□□□ 0.55
TSPAN1-208ENST00000482928 ARHGEF5Q12774 1597 aa18.47■□□□□ 0.55
TSPAN1-208ENST00000482928 CFAP74Q9C0B2 1584 aa18.47■□□□□ 0.55
TSPAN1-208ENST00000482928 CCDC141Q6ZP82 1450 aa18.46■□□□□ 0.55
TSPAN1-208ENST00000482928 SYCP2Q9BX26 1530 aa18.46■□□□□ 0.55
TSPAN1-208ENST00000482928 HNRNPMP52272 730 aaKnown RBP eCLIP18.46■□□□□ 0.55
TSPAN1-208ENST00000482928 ADGBQ8N7X0 1667 aa18.46■□□□□ 0.55
TSPAN1-208ENST00000482928 HFM1A2PYH4 1435 aa18.46■□□□□ 0.55
TSPAN1-208ENST00000482928 DENND4BO75064 1496 aaPredicted RBP18.46■□□□□ 0.54
TSPAN1-208ENST00000482928 CAMSAP1Q5T5Y3 1602 aa18.45■□□□□ 0.54
TSPAN1-208ENST00000482928 RAB3GAP2Q9H2M9 1393 aa18.45■□□□□ 0.54
TSPAN1-208ENST00000482928 ZMYM4Q5VZL5 1548 aa18.45■□□□□ 0.54
TSPAN1-208ENST00000482928 SHANK2Q9UPX8 1470 aa18.45■□□□□ 0.54
TSPAN1-208ENST00000482928 ROCK1Q13464 1354 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms