RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 NEFLP07196 543 aa16.72■□□□□ 0.27
RAPGEF3-210ENST00000482843 EHBP1L1Q8N3D4 1523 aa16.71■□□□□ 0.27
RAPGEF3-210ENST00000482843 PRG4Q92954 1404 aaPredicted RBP16.7■□□□□ 0.26
RAPGEF3-210ENST00000482843 MAGI3Q5TCQ9 1506 aa16.7■□□□□ 0.26
RAPGEF3-210ENST00000482843 KDM2AQ9Y2K7 1162 aa16.7■□□□□ 0.26
RAPGEF3-210ENST00000482843 FKBP8Q14318 412 aa16.69■□□□□ 0.26
RAPGEF3-210ENST00000482843 SUPT6HQ7KZ85 1726 aaKnown RBP16.69■□□□□ 0.26
RAPGEF3-210ENST00000482843 TSPY4P0CV99 314 aa16.69■□□□□ 0.26
RAPGEF3-210ENST00000482843 TSPY10P0CW01 314 aa16.69■□□□□ 0.26
RAPGEF3-210ENST00000482843 SAMD9Q5K651 1589 aa16.68■□□□□ 0.26
RAPGEF3-210ENST00000482843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.68■□□□□ 0.26
RAPGEF3-210ENST00000482843 SUPT16HQ9Y5B9 1047 aaKnown RBP16.68■□□□□ 0.26
RAPGEF3-210ENST00000482843 HNRNPUQ00839 825 aaKnown RBP eCLIP16.68■□□□□ 0.26
RAPGEF3-210ENST00000482843 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
RAPGEF3-210ENST00000482843 KIAA0586Q9BVV6 1533 aa16.67■□□□□ 0.26
RAPGEF3-210ENST00000482843 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
RAPGEF3-210ENST00000482843 PLB1Q6P1J6 1458 aa16.66■□□□□ 0.26
RAPGEF3-210ENST00000482843 SENP3-EIF4A1A0A087X0R7 540 aa16.66■□□□□ 0.26
RAPGEF3-210ENST00000482843 TULP1O00294 542 aaPredicted RBP16.66■□□□□ 0.26
RAPGEF3-210ENST00000482843 CARMIL2Q6F5E8 1435 aa16.66■□□□□ 0.26
RAPGEF3-210ENST00000482843 HNRNPMP52272 730 aaKnown RBP eCLIP16.65■□□□□ 0.26
RAPGEF3-210ENST00000482843 HECW1Q76N89 1606 aa16.65■□□□□ 0.26
RAPGEF3-210ENST00000482843 GRIN2AQ12879 1464 aa16.65■□□□□ 0.26
RAPGEF3-210ENST00000482843 ADAMTS12P58397 1594 aa16.65■□□□□ 0.26
RAPGEF3-210ENST00000482843 MYT1LQ9UL68 1186 aa16.65■□□□□ 0.26
RAPGEF3-210ENST00000482843 PKD2Q13563 968 aa16.64■□□□□ 0.25
RAPGEF3-210ENST00000482843 FAM9BQ8IZU0 186 aa16.64■□□□□ 0.25
RAPGEF3-210ENST00000482843 UGGT2Q9NYU1 1516 aa16.63■□□□□ 0.25
RAPGEF3-210ENST00000482843 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
RAPGEF3-210ENST00000482843 IRX6P78412 446 aaPredicted RBP16.59■□□□□ 0.25
RAPGEF3-210ENST00000482843 RGL3Q3MIN7 710 aa16.58■□□□□ 0.24
RAPGEF3-210ENST00000482843 NUP153P49790 1475 aaKnown RBP16.58■□□□□ 0.24
RAPGEF3-210ENST00000482843 PDIA4P13667 645 aaKnown RBP16.58■□□□□ 0.24
RAPGEF3-210ENST00000482843 ARXQ96QS3 562 aa16.57■□□□□ 0.24
RAPGEF3-210ENST00000482843 MIA2Q96PC5 1412 aa16.57■□□□□ 0.24
RAPGEF3-210ENST00000482843 DISP1Q96F81 1524 aa16.57■□□□□ 0.24
RAPGEF3-210ENST00000482843 NBPF8Q3BBV2 869 aa16.57■□□□□ 0.24
RAPGEF3-210ENST00000482843 DAPK1P53355 1430 aa16.57■□□□□ 0.24
RAPGEF3-210ENST00000482843 WASHC2AQ641Q2 1341 aa16.56■□□□□ 0.24
RAPGEF3-210ENST00000482843 ABCC5O15440 1437 aa16.55■□□□□ 0.24
RAPGEF3-210ENST00000482843 LRRIQ1Q96JM4 1722 aa16.55■□□□□ 0.24
RAPGEF3-210ENST00000482843 NUP155O75694 1391 aa16.55■□□□□ 0.24
RAPGEF3-210ENST00000482843 WDR62O43379 1518 aa16.55■□□□□ 0.24
RAPGEF3-210ENST00000482843 PDE4CQ08493 712 aa16.55■□□□□ 0.24
RAPGEF3-210ENST00000482843 MRS2Q9HD23 443 aa16.55■□□□□ 0.24
RAPGEF3-210ENST00000482843 EIF4G3O43432 1585 aaKnown RBP16.54■□□□□ 0.24
RAPGEF3-210ENST00000482843 SYNJ2O15056 1496 aa16.53■□□□□ 0.24
RAPGEF3-210ENST00000482843 PTPRGP23470 1445 aa16.53■□□□□ 0.24
RAPGEF3-210ENST00000482843 TROQ12816 1431 aaPredicted RBP16.53■□□□□ 0.24
RAPGEF3-210ENST00000482843 CCER2I3L3R5 266 aa16.53■□□□□ 0.24
RAPGEF3-210ENST00000482843 C11orf95C9JLR9 678 aaPredicted RBP16.52■□□□□ 0.24
RAPGEF3-210ENST00000482843 ANKRD30AQ9BXX3 1397 aa16.51■□□□□ 0.23
RAPGEF3-210ENST00000482843 DCAF11Q8TEB1 546 aa16.51■□□□□ 0.23
RAPGEF3-210ENST00000482843 KIAA0556O60303 1618 aa16.5■□□□□ 0.23
RAPGEF3-210ENST00000482843 KDM6BO15054 1643 aa16.49■□□□□ 0.23
RAPGEF3-210ENST00000482843 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
RAPGEF3-210ENST00000482843 CARD11Q9BXL7 1154 aa16.48■□□□□ 0.23
RAPGEF3-210ENST00000482843 SALL2Q9Y467 1007 aaPredicted RBP16.48■□□□□ 0.23
RAPGEF3-210ENST00000482843 CCDC184Q52MB2 194 aa16.47■□□□□ 0.23
RAPGEF3-210ENST00000482843 TCOF1Q13428 1488 aaKnown RBP16.46■□□□□ 0.23
RAPGEF3-210ENST00000482843 RAPGEF6Q8TEU7 1601 aa16.45■□□□□ 0.22
RAPGEF3-210ENST00000482843 ANKRD30BQ9BXX2 1392 aa16.45■□□□□ 0.22
RAPGEF3-210ENST00000482843 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
RAPGEF3-210ENST00000482843 CAMSAP2Q08AD1 1489 aa16.45■□□□□ 0.22
RAPGEF3-210ENST00000482843 A0A0U1RQG5 324 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF3-210ENST00000482843 ANKRD50Q9ULJ7 1429 aa16.44■□□□□ 0.22
RAPGEF3-210ENST00000482843 GPATCH8Q9UKJ3 1502 aaKnown RBP16.43■□□□□ 0.22
RAPGEF3-210ENST00000482843 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
RAPGEF3-210ENST00000482843 NCOA1Q15788 1441 aa16.42■□□□□ 0.22
RAPGEF3-210ENST00000482843 ROCK1Q13464 1354 aa16.41■□□□□ 0.22
RAPGEF3-210ENST00000482843 AKNAQ7Z591 1439 aa16.41■□□□□ 0.22
RAPGEF3-210ENST00000482843 KIF7Q2M1P5 1343 aa16.4■□□□□ 0.22
RAPGEF3-210ENST00000482843 KIF15Q9NS87 1388 aa16.39■□□□□ 0.21
RAPGEF3-210ENST00000482843 PRKRIP1Q9H875 184 aaPredicted RBP16.39■□□□□ 0.21
RAPGEF3-210ENST00000482843 ATP10BO94823 1461 aa16.38■□□□□ 0.21
RAPGEF3-210ENST00000482843 CCDC7Q96M83 1385 aa16.38■□□□□ 0.21
RAPGEF3-210ENST00000482843 DENND4BO75064 1496 aaPredicted RBP16.38■□□□□ 0.21
RAPGEF3-210ENST00000482843 C9orf84Q5VXU9 1444 aa16.36■□□□□ 0.21
RAPGEF3-210ENST00000482843 ST20-MTHFSA0A0A6YYL1 179 aa16.36■□□□□ 0.21
RAPGEF3-210ENST00000482843 BCL11BQ9C0K0 894 aaPredicted RBP16.36■□□□□ 0.21
RAPGEF3-210ENST00000482843 KIF14Q15058 1648 aa16.36■□□□□ 0.21
RAPGEF3-210ENST00000482843 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
RAPGEF3-210ENST00000482843 USP47Q96K76 1375 aa16.35■□□□□ 0.21
RAPGEF3-210ENST00000482843 NUP160Q12769 1436 aa16.34■□□□□ 0.21
RAPGEF3-210ENST00000482843 HAP1P54257 671 aaPredicted RBP16.33■□□□□ 0.2
RAPGEF3-210ENST00000482843 RPRD2Q5VT52 1461 aaKnown RBP16.33■□□□□ 0.2
RAPGEF3-210ENST00000482843 KIAA1107Q9UPP5 1409 aa16.33■□□□□ 0.2
RAPGEF3-210ENST00000482843 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.32■□□□□ 0.2
RAPGEF3-210ENST00000482843 TSHZ2Q9NRE2 1034 aa16.3■□□□□ 0.2
RAPGEF3-210ENST00000482843 CNTLNQ9NXG0 1405 aa16.3■□□□□ 0.2
RAPGEF3-210ENST00000482843 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
RAPGEF3-210ENST00000482843 DNMT1P26358 1616 aaKnown RBP16.29■□□□□ 0.2
RAPGEF3-210ENST00000482843 ROCK2O75116 1388 aaKnown RBP16.28■□□□□ 0.2
RAPGEF3-210ENST00000482843 EFCAB2Q5VUJ9 269 aa16.28■□□□□ 0.2
RAPGEF3-210ENST00000482843 DHX37Q8IY37 1157 aaKnown RBP16.28■□□□□ 0.2
RAPGEF3-210ENST00000482843 AFAP1Q8N556 730 aa16.27■□□□□ 0.2
RAPGEF3-210ENST00000482843 PZPP20742 1482 aa16.27■□□□□ 0.2
RAPGEF3-210ENST00000482843 GCC2Q8IWJ2 1684 aa16.26■□□□□ 0.19
RAPGEF3-210ENST00000482843 NBPF1Q3BBV0 1214 aa16.26■□□□□ 0.19
RAPGEF3-210ENST00000482843 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms