RNA–Protein interactions for RNA: ENST00000482818.1

AP1B1-211, Transcript of adaptor related protein complex 1 subunit beta 1, humanhuman

TSL 1 (best)

Gene AP1B1, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1B1-211ENST00000482818 SKAP1Q86WV1 359 aa16.04■□□□□ 0.16
AP1B1-211ENST00000482818 ZMYND15Q9H091 742 aa16.04■□□□□ 0.16
AP1B1-211ENST00000482818 ZNF777Q9ULD5 760 aaPredicted RBP16.03■□□□□ 0.16
AP1B1-211ENST00000482818 NBPF8Q3BBV2 869 aa16.02■□□□□ 0.16
AP1B1-211ENST00000482818 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.16
AP1B1-211ENST00000482818 BACH2Q9BYV9 841 aa16.02■□□□□ 0.15
AP1B1-211ENST00000482818 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
AP1B1-211ENST00000482818 PLEKHG5O94827 1062 aa16■□□□□ 0.15
AP1B1-211ENST00000482818 PODXL2Q9NZ53 605 aa15.99■□□□□ 0.15
AP1B1-211ENST00000482818 FAM43AQ8N2R8 423 aa15.98■□□□□ 0.15
AP1B1-211ENST00000482818 CUX1P39880 1505 aa15.97■□□□□ 0.15
AP1B1-211ENST00000482818 MS4A1P11836 297 aa15.97■□□□□ 0.15
AP1B1-211ENST00000482818 HFM1A2PYH4 1435 aa15.97■□□□□ 0.15
AP1B1-211ENST00000482818 CRBNQ96SW2 442 aa15.95■□□□□ 0.14
AP1B1-211ENST00000482818 NAP1L5Q96NT1 182 aaPredicted RBP15.95■□□□□ 0.14
AP1B1-211ENST00000482818 NAIPQ13075 1403 aa15.95■□□□□ 0.14
AP1B1-211ENST00000482818 PNISRQ8TF01 805 aaKnown RBP15.94■□□□□ 0.14
AP1B1-211ENST00000482818 CC2D1BQ5T0F9 858 aaKnown RBP15.94■□□□□ 0.14
AP1B1-211ENST00000482818 CANXP27824 592 aaKnown RBP15.93■□□□□ 0.14
AP1B1-211ENST00000482818 CDCA7LQ96GN5 454 aa15.93■□□□□ 0.14
AP1B1-211ENST00000482818 AQRO60306 1485 aaKnown RBP eCLIP15.93■□□□□ 0.142e-7■■■■■ 29.6
AP1B1-211ENST00000482818 FRAT2O75474 233 aaPredicted RBP15.92■□□□□ 0.14
AP1B1-211ENST00000482818 SLKQ9H2G2 1235 aaPredicted RBP15.92■□□□□ 0.14
AP1B1-211ENST00000482818 PTPRKQ15262 1439 aa15.92■□□□□ 0.14
AP1B1-211ENST00000482818 MAP3K1Q13233 1512 aa15.9■□□□□ 0.14
AP1B1-211ENST00000482818 NCOA1Q15788 1441 aa15.9■□□□□ 0.14
AP1B1-211ENST00000482818 USP47Q96K76 1375 aa15.89■□□□□ 0.13
AP1B1-211ENST00000482818 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.89■□□□□ 0.13
AP1B1-211ENST00000482818 PCF11O94913 1555 aaKnown RBP15.89■□□□□ 0.13
AP1B1-211ENST00000482818 MYOM3Q5VTT5 1437 aa15.88■□□□□ 0.13
AP1B1-211ENST00000482818 DCAF11Q8TEB1 546 aa15.88■□□□□ 0.13
AP1B1-211ENST00000482818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.87■□□□□ 0.13
AP1B1-211ENST00000482818 CASKIN1Q8WXD9 1431 aa15.87■□□□□ 0.13
AP1B1-211ENST00000482818 WDR43Q15061 677 aaKnown RBP eCLIP15.86■□□□□ 0.13
AP1B1-211ENST00000482818 ST20-MTHFSA0A0A6YYL1 179 aa15.86■□□□□ 0.13
AP1B1-211ENST00000482818 HSP90AA2PQ14568 343 aaPredicted RBP15.86■□□□□ 0.13
AP1B1-211ENST00000482818 MYBBP1AQ9BQG0 1328 aaKnown RBP15.86■□□□□ 0.13
AP1B1-211ENST00000482818 SLC24A1O60721 1099 aa15.86■□□□□ 0.13
AP1B1-211ENST00000482818 PKD2Q13563 968 aa15.86■□□□□ 0.13
AP1B1-211ENST00000482818 BECN1Q14457 450 aa15.86■□□□□ 0.13
AP1B1-211ENST00000482818 RALBP1Q15311 655 aa15.86■□□□□ 0.13
AP1B1-211ENST00000482818 RGL3Q3MIN7 710 aa15.85■□□□□ 0.13
AP1B1-211ENST00000482818 NCOA2Q15596 1464 aa15.85■□□□□ 0.13
AP1B1-211ENST00000482818 SPRYD3Q8NCJ5 442 aa15.85■□□□□ 0.13
AP1B1-211ENST00000482818 UPF2Q9HAU5 1272 aaKnown RBP15.85■□□□□ 0.13
AP1B1-211ENST00000482818 NLRP13Q86W25 1043 aa15.84■□□□□ 0.13
AP1B1-211ENST00000482818 GZF1Q9H116 711 aaPredicted RBP15.84■□□□□ 0.13
AP1B1-211ENST00000482818 PDE3BQ13370 1112 aa15.84■□□□□ 0.13
AP1B1-211ENST00000482818 FAM161AQ3B820 660 aa15.84■□□□□ 0.13
AP1B1-211ENST00000482818 BIVM-ERCC5R4GMW8 1640 aa15.84■□□□□ 0.13
AP1B1-211ENST00000482818 ARID4BQ4LE39 1312 aaPredicted RBP15.83■□□□□ 0.13
AP1B1-211ENST00000482818 KIF15Q9NS87 1388 aa15.83■□□□□ 0.12
AP1B1-211ENST00000482818 FYCO1Q9BQS8 1478 aa15.83■□□□□ 0.12
AP1B1-211ENST00000482818 NCAPD3P42695 1498 aa15.83■□□□□ 0.12
AP1B1-211ENST00000482818 CFTRP13569 1480 aa15.82■□□□□ 0.12
AP1B1-211ENST00000482818 PTPN23Q9H3S7 1636 aa15.82■□□□□ 0.12
AP1B1-211ENST00000482818 RNF123Q5XPI4 1314 aa15.81■□□□□ 0.12
AP1B1-211ENST00000482818 KTN1Q86UP2 1357 aaKnown RBP15.8■□□□□ 0.12
AP1B1-211ENST00000482818 FGD5Q6ZNL6 1462 aa15.8■□□□□ 0.12
AP1B1-211ENST00000482818 PNNQ9H307 717 aaKnown RBP15.8■□□□□ 0.12
AP1B1-211ENST00000482818 RRAGDQ9NQL2 400 aaPredicted RBP15.8■□□□□ 0.12
AP1B1-211ENST00000482818 HSP90AA1P07900 732 aaKnown RBP15.8■□□□□ 0.12
AP1B1-211ENST00000482818 PEG3Q9GZU2 1588 aa15.79■□□□□ 0.12
AP1B1-211ENST00000482818 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
AP1B1-211ENST00000482818 L1TD1Q5T7N2 865 aaKnown RBP15.78■□□□□ 0.12
AP1B1-211ENST00000482818 CENPQQ7L2Z9 268 aaPredicted RBP15.78■□□□□ 0.12
AP1B1-211ENST00000482818 CFDP1Q9UEE9 299 aaPredicted RBP15.76■□□□□ 0.11
AP1B1-211ENST00000482818 ZNF644Q9H582 1327 aaPredicted RBP15.76■□□□□ 0.11
AP1B1-211ENST00000482818 ROCK2O75116 1388 aaKnown RBP15.76■□□□□ 0.11
AP1B1-211ENST00000482818 C20orf194Q5TEA3 1177 aa15.76■□□□□ 0.11
AP1B1-211ENST00000482818 RRP9O43818 475 aaKnown RBP15.74■□□□□ 0.11
AP1B1-211ENST00000482818 POGKQ9P215 609 aa15.74■□□□□ 0.11
AP1B1-211ENST00000482818 BRD4O60885 1362 aaPredicted RBP15.74■□□□□ 0.11
AP1B1-211ENST00000482818 TDRD9Q8NDG6 1382 aaKnown RBP15.73■□□□□ 0.11
AP1B1-211ENST00000482818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.72■□□□□ 0.11
AP1B1-211ENST00000482818 RAD54L2Q9Y4B4 1467 aa15.72■□□□□ 0.11
AP1B1-211ENST00000482818 TRIM44Q96DX7 344 aaPredicted RBP15.71■□□□□ 0.11
AP1B1-211ENST00000482818 ANKRD30BQ9BXX2 1392 aa15.71■□□□□ 0.11
AP1B1-211ENST00000482818 GOLGA6L3A6NEY3 463 aa15.7■□□□□ 0.1
AP1B1-211ENST00000482818 A0A0U1RQG5 324 aaPredicted RBP15.7■□□□□ 0.1
AP1B1-211ENST00000482818 DHX29Q7Z478 1369 aaKnown RBP15.7■□□□□ 0.1
AP1B1-211ENST00000482818 KNSTRNQ9Y448 316 aa15.69■□□□□ 0.1
AP1B1-211ENST00000482818 CADPSQ9ULU8 1353 aa15.68■□□□□ 0.1
AP1B1-211ENST00000482818 NESP48681 1621 aa15.68■□□□□ 0.1
AP1B1-211ENST00000482818 NEUROD2Q15784 382 aa15.67■□□□□ 0.1
AP1B1-211ENST00000482818 TSPY4P0CV99 314 aa15.67■□□□□ 0.1
AP1B1-211ENST00000482818 TSPY10P0CW01 314 aa15.67■□□□□ 0.1
AP1B1-211ENST00000482818 GOLGA2Q08379 1002 aa15.67■□□□□ 0.1
AP1B1-211ENST00000482818 CCDC146Q8IYE0 955 aa15.67■□□□□ 0.1
AP1B1-211ENST00000482818 PANK3Q9H999 370 aa15.66■□□□□ 0.1
AP1B1-211ENST00000482818 NUP155O75694 1391 aa15.65■□□□□ 0.1
AP1B1-211ENST00000482818 CFAP43Q8NDM7 1665 aa15.65■□□□□ 0.1
AP1B1-211ENST00000482818 RPRD2Q5VT52 1461 aaKnown RBP15.64■□□□□ 0.09
AP1B1-211ENST00000482818 ADAMTS8Q9UP79 889 aa15.64■□□□□ 0.09
AP1B1-211ENST00000482818 MIA2Q96PC5 1412 aa15.63■□□□□ 0.09
AP1B1-211ENST00000482818 EFCAB5A4FU69 1503 aa15.62■□□□□ 0.09
AP1B1-211ENST00000482818 ANP32BQ92688 251 aaKnown RBP15.61■□□□□ 0.09
AP1B1-211ENST00000482818 C8orf34Q49A92 452 aa15.6■□□□□ 0.09
AP1B1-211ENST00000482818 TMF1P82094 1093 aa15.6■□□□□ 0.09
AP1B1-211ENST00000482818 MYH16Q9H6N6 1097 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms