RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 MLECQ14165 292 aa12.37□□□□□ -0.43
CHD6-209ENST00000482596 ZNF335Q9H4Z2 1342 aaPredicted RBP12.37□□□□□ -0.43
CHD6-209ENST00000482596 BIVM-ERCC5R4GMW8 1640 aa12.36□□□□□ -0.43
CHD6-209ENST00000482596 DISP1Q96F81 1524 aa12.35□□□□□ -0.43
CHD6-209ENST00000482596 UHRF1BP1Q6BDS2 1440 aa12.35□□□□□ -0.43
CHD6-209ENST00000482596 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
CHD6-209ENST00000482596 FANCAO15360 1455 aa12.34□□□□□ -0.43
CHD6-209ENST00000482596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.33□□□□□ -0.44
CHD6-209ENST00000482596 HNRNPUL2Q1KMD3 747 aaKnown RBP12.33□□□□□ -0.44
CHD6-209ENST00000482596 POGZQ7Z3K3 1410 aa12.33□□□□□ -0.44
CHD6-209ENST00000482596 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
CHD6-209ENST00000482596 POTEAQ6S8J7 498 aa12.29□□□□□ -0.44
CHD6-209ENST00000482596 PHLDB1Q86UU1 1377 aa12.29□□□□□ -0.44
CHD6-209ENST00000482596 SETD1BQ9UPS6 1966 aaKnown RBP12.29□□□□□ -0.44
CHD6-209ENST00000482596 NCOA1Q15788 1441 aa12.28□□□□□ -0.44
CHD6-209ENST00000482596 IQGAP2Q13576 1575 aa12.28□□□□□ -0.44
CHD6-209ENST00000482596 RICTORQ6R327 1708 aa12.28□□□□□ -0.44
CHD6-209ENST00000482596 CAPN15O75808 1086 aa12.27□□□□□ -0.45
CHD6-209ENST00000482596 SAMD1Q6SPF0 538 aaPredicted RBP12.27□□□□□ -0.45
CHD6-209ENST00000482596 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
CHD6-209ENST00000482596 ARHGEF12Q9NZN5 1544 aa12.27□□□□□ -0.45
CHD6-209ENST00000482596 APLP2Q06481 763 aa12.26□□□□□ -0.45
CHD6-209ENST00000482596 AKNAQ7Z591 1439 aa12.25□□□□□ -0.45
CHD6-209ENST00000482596 NEO1Q92859 1461 aa12.25□□□□□ -0.45
CHD6-209ENST00000482596 ABCA9Q8IUA7 1624 aa12.25□□□□□ -0.45
CHD6-209ENST00000482596 ZBTB22O15209 634 aa12.24□□□□□ -0.45
CHD6-209ENST00000482596 KIAA0556O60303 1618 aa12.22□□□□□ -0.45
CHD6-209ENST00000482596 ALKQ9UM73 1620 aa12.21□□□□□ -0.46
CHD6-209ENST00000482596 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.46
CHD6-209ENST00000482596 IGF1RP08069 1367 aa12.2□□□□□ -0.46
CHD6-209ENST00000482596 NCKAP5LQ9HCH0 1330 aa12.2□□□□□ -0.46
CHD6-209ENST00000482596 CAMSAP1Q5T5Y3 1602 aa12.2□□□□□ -0.46
CHD6-209ENST00000482596 TOM1O60784 492 aa12.2□□□□□ -0.46
CHD6-209ENST00000482596 UPF1Q92900 1129 aaKnown RBP eCLIP12.19□□□□□ -0.46
CHD6-209ENST00000482596 DENND4BO75064 1496 aaPredicted RBP12.18□□□□□ -0.46
CHD6-209ENST00000482596 C3P01024 1663 aa12.18□□□□□ -0.46
CHD6-209ENST00000482596 FHOD3Q2V2M9 1422 aa12.17□□□□□ -0.46
CHD6-209ENST00000482596 ABCA8O94911 1581 aa12.17□□□□□ -0.46
CHD6-209ENST00000482596 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
CHD6-209ENST00000482596 ZMYM4Q5VZL5 1548 aa12.16□□□□□ -0.46
CHD6-209ENST00000482596 ARID3CA6NKF2 412 aa12.14□□□□□ -0.47
CHD6-209ENST00000482596 UGGT2Q9NYU1 1516 aa12.14□□□□□ -0.47
CHD6-209ENST00000482596 HECW1Q76N89 1606 aa12.12□□□□□ -0.47
CHD6-209ENST00000482596 ZNF219Q9P2Y4 722 aaPredicted RBP12.12□□□□□ -0.47
CHD6-209ENST00000482596 DSG3P32926 999 aa12.09□□□□□ -0.47
CHD6-209ENST00000482596 TRAPPC8Q9Y2L5 1435 aa12.08□□□□□ -0.48
CHD6-209ENST00000482596 CARMIL1Q5VZK9 1371 aa12.07□□□□□ -0.48
CHD6-209ENST00000482596 MAGI2Q86UL8 1455 aa12.07□□□□□ -0.48
CHD6-209ENST00000482596 IFFO2Q5TF58 517 aa12.06□□□□□ -0.48
CHD6-209ENST00000482596 ATP10BO94823 1461 aa12.06□□□□□ -0.48
CHD6-209ENST00000482596 PTPRKQ15262 1439 aa12.05□□□□□ -0.48
CHD6-209ENST00000482596 C9orf84Q5VXU9 1444 aa12.05□□□□□ -0.48
CHD6-209ENST00000482596 ATP10AO60312 1499 aa12.05□□□□□ -0.48
CHD6-209ENST00000482596 CPS1P31327 1500 aa12.05□□□□□ -0.48
CHD6-209ENST00000482596 SUPT6HQ7KZ85 1726 aaKnown RBP12.04□□□□□ -0.48
CHD6-209ENST00000482596 TCOF1Q13428 1488 aaKnown RBP12.03□□□□□ -0.48
CHD6-209ENST00000482596 PKD2Q13563 968 aa12.01□□□□□ -0.49
CHD6-209ENST00000482596 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
CHD6-209ENST00000482596 SHANK2Q9UPX8 1470 aa12.01□□□□□ -0.49
CHD6-209ENST00000482596 RAPGEF2Q9Y4G8 1499 aa12.01□□□□□ -0.49
CHD6-209ENST00000482596 KIF27Q86VH2 1401 aa12□□□□□ -0.49
CHD6-209ENST00000482596 PLA2R1Q13018 1463 aa12□□□□□ -0.49
CHD6-209ENST00000482596 CFAP74Q9C0B2 1584 aa12□□□□□ -0.49
CHD6-209ENST00000482596 ABCB7O75027 752 aa11.99□□□□□ -0.49
CHD6-209ENST00000482596 SETBP1Q9Y6X0 1596 aa11.97□□□□□ -0.49
CHD6-209ENST00000482596 CSRNP3Q8WYN3 585 aa11.97□□□□□ -0.49
CHD6-209ENST00000482596 TRIM52Q96A61 297 aa11.97□□□□□ -0.49
CHD6-209ENST00000482596 ATF5Q9Y2D1 282 aaPredicted RBP11.97□□□□□ -0.49
CHD6-209ENST00000482596 ZNF142P52746 1687 aaPredicted RBP11.97□□□□□ -0.49
CHD6-209ENST00000482596 MYO3AQ8NEV4 1616 aa11.95□□□□□ -0.5
CHD6-209ENST00000482596 VWDEQ8N2E2 1590 aa11.93□□□□□ -0.5
CHD6-209ENST00000482596 LRRC7Q96NW7 1537 aa11.93□□□□□ -0.5
CHD6-209ENST00000482596 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
CHD6-209ENST00000482596 SCAPERQ9BY12 1400 aa11.93□□□□□ -0.5
CHD6-209ENST00000482596 CEP170BQ9Y4F5 1589 aaPredicted RBP11.92□□□□□ -0.5
CHD6-209ENST00000482596 RNF17Q9BXT8 1623 aaKnown RBP11.92□□□□□ -0.5
CHD6-209ENST00000482596 NEURL4Q96JN8 1562 aa11.92□□□□□ -0.5
CHD6-209ENST00000482596 STRCP1A6NGW2 1772 aa11.91□□□□□ -0.5
CHD6-209ENST00000482596 NPATQ14207 1427 aa11.91□□□□□ -0.5
CHD6-209ENST00000482596 POLR1AO95602 1720 aaPredicted RBP11.91□□□□□ -0.5
CHD6-209ENST00000482596 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
CHD6-209ENST00000482596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.9□□□□□ -0.5
CHD6-209ENST00000482596 DIP2CQ9Y2E4 1556 aa11.89□□□□□ -0.51
CHD6-209ENST00000482596 POLA2Q14181 598 aa11.89□□□□□ -0.51
CHD6-209ENST00000482596 RBM33Q96EV2 1170 aaKnown RBP11.89□□□□□ -0.51
CHD6-209ENST00000482596 GOLGA3Q08378 1498 aa11.88□□□□□ -0.51
CHD6-209ENST00000482596 AGLP35573 1532 aa11.87□□□□□ -0.51
CHD6-209ENST00000482596 MROH2AA6NES4 1674 aa11.86□□□□□ -0.51
CHD6-209ENST00000482596 CTTNBP2Q8WZ74 1663 aa11.85□□□□□ -0.51
CHD6-209ENST00000482596 ABCA6Q8N139 1617 aa11.85□□□□□ -0.51
CHD6-209ENST00000482596 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
CHD6-209ENST00000482596 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
CHD6-209ENST00000482596 CNTLNQ9NXG0 1405 aa11.84□□□□□ -0.51
CHD6-209ENST00000482596 DNMT1P26358 1616 aaKnown RBP11.83□□□□□ -0.52
CHD6-209ENST00000482596 ZMYM3Q14202 1370 aa11.82□□□□□ -0.52
CHD6-209ENST00000482596 RAPGEF6Q8TEU7 1601 aa11.8□□□□□ -0.52
CHD6-209ENST00000482596 P3H3Q8IVL6 736 aa11.8□□□□□ -0.52
CHD6-209ENST00000482596 SYNMO15061 1565 aa11.79□□□□□ -0.52
CHD6-209ENST00000482596 KDM5CP41229 1560 aa11.79□□□□□ -0.52
CHD6-209ENST00000482596 XIRP1Q702N8 1843 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms