RNA–Protein interactions for RNA: ENST00000482489.5

ING4-212, Transcript of inhibitor of growth family member 4, human

TSL 3

Gene ING4, Length 659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ING4-212	ENST00000482489	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	20.6	■□□□□ 0.89
ING4-212	ENST00000482489	HNRNPUL2	Q1KMD3	747 aa	Known RBP	20.6	■□□□□ 0.89
ING4-212	ENST00000482489	DMRT2	Q9Y5R5	561 aa		20.6	■□□□□ 0.89
ING4-212	ENST00000482489	MLEC	Q14165	292 aa		20.58	■□□□□ 0.89
ING4-212	ENST00000482489	SETD1B	Q9UPS6	1966 aa	Known RBP	20.55	■□□□□ 0.88
ING4-212	ENST00000482489	C9orf84	Q5VXU9	1444 aa		20.53	■□□□□ 0.88
ING4-212	ENST00000482489	UHRF1BP1	Q6BDS2	1440 aa		20.53	■□□□□ 0.88
ING4-212	ENST00000482489	ATP10A	O60312	1499 aa		20.53	■□□□□ 0.88
ING4-212	ENST00000482489	IQSEC2	Q5JU85	1478 aa		20.53	■□□□□ 0.88
ING4-212	ENST00000482489	LTBP4	Q8N2S1	1624 aa		20.53	■□□□□ 0.88
ING4-212	ENST00000482489	PTPRT	O14522	1441 aa		20.53	■□□□□ 0.88
ING4-212	ENST00000482489	PLEKHD1	A6NEE1	506 aa		20.52	■□□□□ 0.88
ING4-212	ENST00000482489	CEBPA	P49715	358 aa	Predicted RBP	20.49	■□□□□ 0.87
ING4-212	ENST00000482489	SCAPER	Q9BY12	1400 aa		20.49	■□□□□ 0.87
ING4-212	ENST00000482489	PLCH2	O75038	1416 aa		20.45	■□□□□ 0.86
ING4-212	ENST00000482489	C3	P01024	1663 aa		20.45	■□□□□ 0.86
ING4-212	ENST00000482489	MYO5C	Q9NQX4	1742 aa		20.42	■□□□□ 0.86
ING4-212	ENST00000482489	KDM5C	P41229	1560 aa		20.41	■□□□□ 0.86
ING4-212	ENST00000482489	RERE	Q9P2R6	1566 aa		20.41	■□□□□ 0.86
ING4-212	ENST00000482489	CDK13	Q14004	1512 aa	Known RBP	20.39	■□□□□ 0.85
ING4-212	ENST00000482489	ZNF518A	Q6AHZ1	1483 aa		20.39	■□□□□ 0.85
ING4-212	ENST00000482489	DIP2C	Q9Y2E4	1556 aa		20.38	■□□□□ 0.85
ING4-212	ENST00000482489	NCOA1	Q15788	1441 aa		20.37	■□□□□ 0.85
ING4-212	ENST00000482489	ABCA6	Q8N139	1617 aa		20.33	■□□□□ 0.84
ING4-212	ENST00000482489	TRAPPC8	Q9Y2L5	1435 aa		20.33	■□□□□ 0.84
ING4-212	ENST00000482489	EFCAB2	Q5VUJ9	269 aa		20.31	■□□□□ 0.84
ING4-212	ENST00000482489	AGL	P35573	1532 aa		20.31	■□□□□ 0.84
ING4-212	ENST00000482489	CSRNP3	Q8WYN3	585 aa		20.29	■□□□□ 0.84
ING4-212	ENST00000482489	KIF14	Q15058	1648 aa		20.28	■□□□□ 0.84
ING4-212	ENST00000482489	CAMSAP1	Q5T5Y3	1602 aa		20.28	■□□□□ 0.84
ING4-212	ENST00000482489	RANGAP1	P46060	587 aa	Predicted RBP	20.28	■□□□□ 0.84
ING4-212	ENST00000482489	MLH3	Q9UHC1	1453 aa		20.26	■□□□□ 0.83
ING4-212	ENST00000482489	MROH2A	A6NES4	1674 aa		20.26	■□□□□ 0.83
ING4-212	ENST00000482489	AFAP1	Q8N556	730 aa		20.25	■□□□□ 0.83
ING4-212	ENST00000482489	ARHGAP5	Q13017	1502 aa		20.25	■□□□□ 0.83
ING4-212	ENST00000482489	CNTLN	Q9NXG0	1405 aa		20.25	■□□□□ 0.83
ING4-212	ENST00000482489	UBAP1L	F5GYI3	381 aa		20.23	■□□□□ 0.83
ING4-212	ENST00000482489	NPAT	Q14207	1427 aa		20.23	■□□□□ 0.83
ING4-212	ENST00000482489	MED1	Q15648	1581 aa	Predicted RBP	20.23	■□□□□ 0.83
ING4-212	ENST00000482489	ZNF142	P52746	1687 aa	Predicted RBP	20.22	■□□□□ 0.83
ING4-212	ENST00000482489	CDC42BPB	Q9Y5S2	1711 aa		20.22	■□□□□ 0.83
ING4-212	ENST00000482489	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	20.21	■□□□□ 0.83
ING4-212	ENST00000482489	ESF1	Q9H501	851 aa	Known RBP	20.2	■□□□□ 0.82
ING4-212	ENST00000482489	ITSN2	Q9NZM3	1697 aa		20.19	■□□□□ 0.82
ING4-212	ENST00000482489	KIDINS220	Q9ULH0	1771 aa		20.18	■□□□□ 0.82
ING4-212	ENST00000482489	SUPT6H	Q7KZ85	1726 aa	Known RBP	20.18	■□□□□ 0.82
ING4-212	ENST00000482489	PLA2R1	Q13018	1463 aa		20.18	■□□□□ 0.82
ING4-212	ENST00000482489	ABCC1	P33527	1531 aa		20.17	■□□□□ 0.82
ING4-212	ENST00000482489	MYT1L	Q9UL68	1186 aa		20.17	■□□□□ 0.82
ING4-212	ENST00000482489	MYO3A	Q8NEV4	1616 aa		20.16	■□□□□ 0.82
ING4-212	ENST00000482489	TRO	Q12816	1431 aa	Predicted RBP	20.16	■□□□□ 0.82
ING4-212	ENST00000482489	EEA1	Q15075	1411 aa		20.16	■□□□□ 0.82
ING4-212	ENST00000482489	PREX2	Q70Z35	1606 aa		20.16	■□□□□ 0.82
ING4-212	ENST00000482489	TCOF1	Q13428	1488 aa	Known RBP	20.15	■□□□□ 0.82
ING4-212	ENST00000482489	NCKAP5L	Q9HCH0	1330 aa		20.14	■□□□□ 0.81
ING4-212	ENST00000482489	CDK11A	Q9UQ88	783 aa	Predicted RBP	20.13	■□□□□ 0.81
ING4-212	ENST00000482489	FMN1	Q68DA7	1419 aa		20.12	■□□□□ 0.81
ING4-212	ENST00000482489	LRRIQ1	Q96JM4	1722 aa		20.12	■□□□□ 0.81
ING4-212	ENST00000482489	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	20.12	■□□□□ 0.81
ING4-212	ENST00000482489	CLIP1	P30622	1438 aa		20.11	■□□□□ 0.81
ING4-212	ENST00000482489	PKD2	Q13563	968 aa		20.11	■□□□□ 0.81
ING4-212	ENST00000482489	ZMYM3	Q14202	1370 aa		20.09	■□□□□ 0.81
ING4-212	ENST00000482489	CLTC	Q00610	1675 aa	Known RBP	20.08	■□□□□ 0.81
ING4-212	ENST00000482489	HSPA1L	P34931	641 aa		20.07	■□□□□ 0.8
ING4-212	ENST00000482489	SAMD9L	Q8IVG5	1584 aa		20.05	■□□□□ 0.8
ING4-212	ENST00000482489	CDC42BPA	Q5VT25	1732 aa		20.05	■□□□□ 0.8
ING4-212	ENST00000482489	ATP1B4	Q9UN42	357 aa	Predicted RBP	20.04	■□□□□ 0.8
ING4-212	ENST00000482489	PTPRK	Q15262	1439 aa		20.03	■□□□□ 0.8
ING4-212	ENST00000482489	ARHGAP35	Q9NRY4	1499 aa		20.03	■□□□□ 0.8
ING4-212	ENST00000482489	PLXNC1	O60486	1568 aa		20.03	■□□□□ 0.8
ING4-212	ENST00000482489	CPS1	P31327	1500 aa		20.02	■□□□□ 0.8
ING4-212	ENST00000482489	POLR1A	O95602	1720 aa	Predicted RBP	20.02	■□□□□ 0.8
ING4-212	ENST00000482489	PPP6R1	Q9UPN7	881 aa		20.02	■□□□□ 0.8
ING4-212	ENST00000482489	SCAF1	Q9H7N4	1312 aa	Known RBP	20	■□□□□ 0.79
ING4-212	ENST00000482489	DNMT1	P26358	1616 aa	Known RBP	19.99	■□□□□ 0.79
ING4-212	ENST00000482489	PIP4K2B	P78356	416 aa		19.98	■□□□□ 0.79
ING4-212	ENST00000482489	NEURL4	Q96JN8	1562 aa		19.98	■□□□□ 0.79
ING4-212	ENST00000482489	TOM1	O60784	492 aa		19.97	■□□□□ 0.79
ING4-212	ENST00000482489	ALK	Q9UM73	1620 aa		19.97	■□□□□ 0.79
ING4-212	ENST00000482489	A2ML1	A8K2U0	1454 aa		19.97	■□□□□ 0.79
ING4-212	ENST00000482489	INO80	Q9ULG1	1556 aa	Predicted RBP	19.96	■□□□□ 0.79
ING4-212	ENST00000482489	ATP7A	Q04656	1500 aa		19.96	■□□□□ 0.79
ING4-212	ENST00000482489	SYCP2	Q9BX26	1530 aa		19.96	■□□□□ 0.79
ING4-212	ENST00000482489	SHANK2	Q9UPX8	1470 aa		19.95	■□□□□ 0.78
ING4-212	ENST00000482489	PHF23	Q9BUL5	403 aa	Predicted RBP	19.95	■□□□□ 0.78
ING4-212	ENST00000482489	A2M	P01023	1474 aa		19.92	■□□□□ 0.78
ING4-212	ENST00000482489	CCDC18	Q5T9S5	1454 aa		19.92	■□□□□ 0.78
ING4-212	ENST00000482489	VWDE	Q8N2E2	1590 aa		19.91	■□□□□ 0.78
ING4-212	ENST00000482489	SPAG9	O60271	1321 aa	Known RBP	19.9	■□□□□ 0.78
ING4-212	ENST00000482489	ADGB	Q8N7X0	1667 aa		19.89	■□□□□ 0.77
ING4-212	ENST00000482489	KIAA1107	Q9UPP5	1409 aa		19.85	■□□□□ 0.77
ING4-212	ENST00000482489	CASKIN1	Q8WXD9	1431 aa		19.84	■□□□□ 0.77
ING4-212	ENST00000482489	GPATCH8	Q9UKJ3	1502 aa	Known RBP	19.83	■□□□□ 0.77
ING4-212	ENST00000482489	GGT6	Q6P531	493 aa		19.83	■□□□□ 0.77
ING4-212	ENST00000482489	DEPDC5	O75140	1603 aa		19.83	■□□□□ 0.76
ING4-212	ENST00000482489	PLEKHH2	Q8IVE3	1493 aa		19.82	■□□□□ 0.76
ING4-212	ENST00000482489	UBTF	P17480	764 aa	Known RBP	19.82	■□□□□ 0.76
ING4-212	ENST00000482489	RNF17	Q9BXT8	1623 aa	Known RBP	19.82	■□□□□ 0.76
ING4-212	ENST00000482489	MED14	O60244	1454 aa		19.81	■□□□□ 0.76
ING4-212	ENST00000482489	HNRNPM	P52272	730 aa	Known RBP eCLIP	19.81	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 190.9 ms