RNA–Protein interactions for RNA: ENST00000482215.3

RN7SL553P-201, Transcript of RNA, 7SL, cytoplasmic 553, pseudogene, humanhuman

BASIC

Gene RN7SL553P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL553P-201ENST00000482215 ARHGEF12Q9NZN5 1544 aa18.35■□□□□ 0.53
RN7SL553P-201ENST00000482215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.34■□□□□ 0.53
RN7SL553P-201ENST00000482215 MAGI2Q86UL8 1455 aa18.34■□□□□ 0.53
RN7SL553P-201ENST00000482215 CEBPAP49715 358 aaPredicted RBP18.33■□□□□ 0.52
RN7SL553P-201ENST00000482215 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
RN7SL553P-201ENST00000482215 PLEKHD1A6NEE1 506 aa18.3■□□□□ 0.52
RN7SL553P-201ENST00000482215 SETD1BQ9UPS6 1966 aaKnown RBP18.27■□□□□ 0.52
RN7SL553P-201ENST00000482215 ATP10AO60312 1499 aa18.26■□□□□ 0.51
RN7SL553P-201ENST00000482215 UHRF1BP1Q6BDS2 1440 aa18.26■□□□□ 0.51
RN7SL553P-201ENST00000482215 SCAPERQ9BY12 1400 aa18.26■□□□□ 0.51
RN7SL553P-201ENST00000482215 LTBP4Q8N2S1 1624 aa18.26■□□□□ 0.51
RN7SL553P-201ENST00000482215 C9orf84Q5VXU9 1444 aa18.25■□□□□ 0.51
RN7SL553P-201ENST00000482215 PTPRTO14522 1441 aa18.24■□□□□ 0.51
RN7SL553P-201ENST00000482215 IQSEC2Q5JU85 1478 aa18.2■□□□□ 0.5
RN7SL553P-201ENST00000482215 PLCH2O75038 1416 aa18.19■□□□□ 0.5
RN7SL553P-201ENST00000482215 RANGAP1P46060 587 aaPredicted RBP18.19■□□□□ 0.5
RN7SL553P-201ENST00000482215 C3P01024 1663 aa18.17■□□□□ 0.5
RN7SL553P-201ENST00000482215 CDK13Q14004 1512 aaKnown RBP18.17■□□□□ 0.5
RN7SL553P-201ENST00000482215 NCOA1Q15788 1441 aa18.13■□□□□ 0.49
RN7SL553P-201ENST00000482215 MYO5CQ9NQX4 1742 aa18.12■□□□□ 0.49
RN7SL553P-201ENST00000482215 KDM5CP41229 1560 aa18.11■□□□□ 0.49
RN7SL553P-201ENST00000482215 DIP2CQ9Y2E4 1556 aa18.11■□□□□ 0.49
RN7SL553P-201ENST00000482215 ZNF518AQ6AHZ1 1483 aa18.1■□□□□ 0.49
RN7SL553P-201ENST00000482215 EFCAB2Q5VUJ9 269 aa18.1■□□□□ 0.49
RN7SL553P-201ENST00000482215 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
RN7SL553P-201ENST00000482215 REREQ9P2R6 1566 aa18.08■□□□□ 0.49
RN7SL553P-201ENST00000482215 TRAPPC8Q9Y2L5 1435 aa18.08■□□□□ 0.49
RN7SL553P-201ENST00000482215 AFAP1Q8N556 730 aa18.08■□□□□ 0.48
RN7SL553P-201ENST00000482215 ABCA6Q8N139 1617 aa18.07■□□□□ 0.48
RN7SL553P-201ENST00000482215 UBAP1LF5GYI3 381 aa18.06■□□□□ 0.48
RN7SL553P-201ENST00000482215 KIF14Q15058 1648 aa18.05■□□□□ 0.48
RN7SL553P-201ENST00000482215 CAMSAP1Q5T5Y3 1602 aa18.05■□□□□ 0.48
RN7SL553P-201ENST00000482215 ZNF335Q9H4Z2 1342 aaPredicted RBP18.04■□□□□ 0.48
RN7SL553P-201ENST00000482215 MYT1LQ9UL68 1186 aa18.04■□□□□ 0.48
RN7SL553P-201ENST00000482215 AGLP35573 1532 aa18.03■□□□□ 0.48
RN7SL553P-201ENST00000482215 ARHGAP5Q13017 1502 aa18.02■□□□□ 0.47
RN7SL553P-201ENST00000482215 ESF1Q9H501 851 aaKnown RBP18.01■□□□□ 0.47
RN7SL553P-201ENST00000482215 NCKAP5LQ9HCH0 1330 aa18■□□□□ 0.47
RN7SL553P-201ENST00000482215 MLH3Q9UHC1 1453 aa18■□□□□ 0.47
RN7SL553P-201ENST00000482215 MED1Q15648 1581 aaPredicted RBP18■□□□□ 0.47
RN7SL553P-201ENST00000482215 CNTLNQ9NXG0 1405 aa17.97■□□□□ 0.47
RN7SL553P-201ENST00000482215 CDC42BPBQ9Y5S2 1711 aa17.96■□□□□ 0.47
RN7SL553P-201ENST00000482215 ATP1B4Q9UN42 357 aaPredicted RBP17.95■□□□□ 0.46
RN7SL553P-201ENST00000482215 NPATQ14207 1427 aa17.95■□□□□ 0.46
RN7SL553P-201ENST00000482215 KIDINS220Q9ULH0 1771 aa17.94■□□□□ 0.46
RN7SL553P-201ENST00000482215 MROH2AA6NES4 1674 aa17.94■□□□□ 0.46
RN7SL553P-201ENST00000482215 TROQ12816 1431 aaPredicted RBP17.93■□□□□ 0.46
RN7SL553P-201ENST00000482215 HSPA1LP34931 641 aa17.93■□□□□ 0.46
RN7SL553P-201ENST00000482215 ITSN2Q9NZM3 1697 aa17.93■□□□□ 0.46
RN7SL553P-201ENST00000482215 ZNF142P52746 1687 aaPredicted RBP17.92■□□□□ 0.46
RN7SL553P-201ENST00000482215 ABCC1P33527 1531 aa17.92■□□□□ 0.46
RN7SL553P-201ENST00000482215 CDK11AQ9UQ88 783 aaPredicted RBP17.91■□□□□ 0.46
RN7SL553P-201ENST00000482215 SUPT6HQ7KZ85 1726 aaKnown RBP17.91■□□□□ 0.46
RN7SL553P-201ENST00000482215 MYO3AQ8NEV4 1616 aa17.9■□□□□ 0.46
RN7SL553P-201ENST00000482215 PLA2R1Q13018 1463 aa17.9■□□□□ 0.46
RN7SL553P-201ENST00000482215 TCOF1Q13428 1488 aaKnown RBP17.9■□□□□ 0.46
RN7SL553P-201ENST00000482215 PKD2Q13563 968 aa17.9■□□□□ 0.46
RN7SL553P-201ENST00000482215 ZMYM3Q14202 1370 aa17.9■□□□□ 0.46
RN7SL553P-201ENST00000482215 LRRIQ1Q96JM4 1722 aa17.89■□□□□ 0.45
RN7SL553P-201ENST00000482215 PREX2Q70Z35 1606 aa17.88■□□□□ 0.45
RN7SL553P-201ENST00000482215 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
RN7SL553P-201ENST00000482215 EEA1Q15075 1411 aa17.88■□□□□ 0.45
RN7SL553P-201ENST00000482215 FMN1Q68DA7 1419 aa17.88■□□□□ 0.45
RN7SL553P-201ENST00000482215 CEP170BQ9Y4F5 1589 aaPredicted RBP17.87■□□□□ 0.45
RN7SL553P-201ENST00000482215 PIP4K2BP78356 416 aa17.87■□□□□ 0.45
RN7SL553P-201ENST00000482215 CLIP1P30622 1438 aa17.87■□□□□ 0.45
RN7SL553P-201ENST00000482215 CLTCQ00610 1675 aaKnown RBP17.86■□□□□ 0.45
RN7SL553P-201ENST00000482215 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
RN7SL553P-201ENST00000482215 SAMD9LQ8IVG5 1584 aa17.83■□□□□ 0.44
RN7SL553P-201ENST00000482215 PTPRKQ15262 1439 aa17.82■□□□□ 0.44
RN7SL553P-201ENST00000482215 ARHGAP35Q9NRY4 1499 aa17.82■□□□□ 0.44
RN7SL553P-201ENST00000482215 TOM1O60784 492 aa17.8■□□□□ 0.44
RN7SL553P-201ENST00000482215 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
RN7SL553P-201ENST00000482215 CDC42BPAQ5VT25 1732 aa17.8■□□□□ 0.44
RN7SL553P-201ENST00000482215 CPS1P31327 1500 aa17.77■□□□□ 0.44
RN7SL553P-201ENST00000482215 ALKQ9UM73 1620 aa17.77■□□□□ 0.44
RN7SL553P-201ENST00000482215 DNMT1P26358 1616 aaKnown RBP17.76■□□□□ 0.43
RN7SL553P-201ENST00000482215 PLXNC1O60486 1568 aa17.76■□□□□ 0.43
RN7SL553P-201ENST00000482215 NEURL4Q96JN8 1562 aa17.76■□□□□ 0.43
RN7SL553P-201ENST00000482215 SHANK2Q9UPX8 1470 aa17.75■□□□□ 0.43
RN7SL553P-201ENST00000482215 POLR1AO95602 1720 aaPredicted RBP17.75■□□□□ 0.43
RN7SL553P-201ENST00000482215 SYCP2Q9BX26 1530 aa17.75■□□□□ 0.43
RN7SL553P-201ENST00000482215 A2ML1A8K2U0 1454 aa17.75■□□□□ 0.43
RN7SL553P-201ENST00000482215 SPAG9O60271 1321 aaKnown RBP17.74■□□□□ 0.43
RN7SL553P-201ENST00000482215 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
RN7SL553P-201ENST00000482215 ATP7AQ04656 1500 aa17.73■□□□□ 0.43
RN7SL553P-201ENST00000482215 A2MP01023 1474 aa17.72■□□□□ 0.43
RN7SL553P-201ENST00000482215 GGT6Q6P531 493 aa17.72■□□□□ 0.43
RN7SL553P-201ENST00000482215 ZNF777Q9ULD5 760 aaPredicted RBP17.72■□□□□ 0.43
RN7SL553P-201ENST00000482215 INO80Q9ULG1 1556 aaPredicted RBP17.71■□□□□ 0.43
RN7SL553P-201ENST00000482215 UBTFP17480 764 aaKnown RBP17.71■□□□□ 0.43
RN7SL553P-201ENST00000482215 VWDEQ8N2E2 1590 aa17.7■□□□□ 0.42
RN7SL553P-201ENST00000482215 HNRNPMP52272 730 aaKnown RBP eCLIP17.7■□□□□ 0.42
RN7SL553P-201ENST00000482215 SENP3Q9H4L4 574 aaPredicted RBP17.68■□□□□ 0.42
RN7SL553P-201ENST00000482215 CCDC18Q5T9S5 1454 aa17.66■□□□□ 0.42
RN7SL553P-201ENST00000482215 GPATCH8Q9UKJ3 1502 aaKnown RBP17.66■□□□□ 0.42
RN7SL553P-201ENST00000482215 RGS17Q9UGC6 210 aaPredicted RBP17.65■□□□□ 0.42
RN7SL553P-201ENST00000482215 ADGBQ8N7X0 1667 aa17.64■□□□□ 0.41
RN7SL553P-201ENST00000482215 CASKIN1Q8WXD9 1431 aa17.64■□□□□ 0.41
RN7SL553P-201ENST00000482215 FBXO31Q5XUX0 539 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms