RNA–Protein interactions for RNA: ENST00000482183.1

CAPN8-208, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-208ENST00000482183 CEP170Q5SW79 1584 aa14.09□□□□□ -0.15
CAPN8-208ENST00000482183 ADGRL2O95490 1459 aa14.09□□□□□ -0.15
CAPN8-208ENST00000482183 SHANK2Q9UPX8 1470 aa14.08□□□□□ -0.16
CAPN8-208ENST00000482183 ABCC5O15440 1437 aa14.07□□□□□ -0.16
CAPN8-208ENST00000482183 EIF4G2P78344 907 aaKnown RBP eCLIP14.07□□□□□ -0.16
CAPN8-208ENST00000482183 RRP7BPQ9NSQ0 103 aa14.07□□□□□ -0.16
CAPN8-208ENST00000482183 KIF14Q15058 1648 aa14.07□□□□□ -0.16
CAPN8-208ENST00000482183 ADGBQ8N7X0 1667 aa14.06□□□□□ -0.16
CAPN8-208ENST00000482183 FBLN2P98095 1184 aa14.05□□□□□ -0.16
CAPN8-208ENST00000482183 ABCA8O94911 1581 aa14.05□□□□□ -0.16
CAPN8-208ENST00000482183 TSPY4P0CV99 314 aa14.04□□□□□ -0.16
CAPN8-208ENST00000482183 TSPY10P0CW01 314 aa14.04□□□□□ -0.16
CAPN8-208ENST00000482183 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
CAPN8-208ENST00000482183 CAMSAP2Q08AD1 1489 aa14.04□□□□□ -0.16
CAPN8-208ENST00000482183 GPATCH8Q9UKJ3 1502 aaKnown RBP14.04□□□□□ -0.16
CAPN8-208ENST00000482183 CHIC2Q9UKJ5 165 aa14.03□□□□□ -0.16
CAPN8-208ENST00000482183 RPRD2Q5VT52 1461 aaKnown RBP14.03□□□□□ -0.16
CAPN8-208ENST00000482183 NCOA1Q15788 1441 aa14.02□□□□□ -0.16
CAPN8-208ENST00000482183 DDX10Q13206 875 aaKnown RBP14.02□□□□□ -0.17
CAPN8-208ENST00000482183 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.17
CAPN8-208ENST00000482183 PTPRGP23470 1445 aa14.01□□□□□ -0.17
CAPN8-208ENST00000482183 ANKRD30BQ9BXX2 1392 aa14□□□□□ -0.17
CAPN8-208ENST00000482183 ARID4BQ4LE39 1312 aaPredicted RBP14□□□□□ -0.17
CAPN8-208ENST00000482183 PLB1Q6P1J6 1458 aa13.99□□□□□ -0.17
CAPN8-208ENST00000482183 PLEKHH2Q8IVE3 1493 aa13.99□□□□□ -0.17
CAPN8-208ENST00000482183 PRG4Q92954 1404 aaPredicted RBP13.99□□□□□ -0.17
CAPN8-208ENST00000482183 ARHGEF5Q12774 1597 aa13.98□□□□□ -0.17
CAPN8-208ENST00000482183 CROCC2H7BZ55 1655 aa13.98□□□□□ -0.17
CAPN8-208ENST00000482183 KIAA1107Q9UPP5 1409 aa13.97□□□□□ -0.17
CAPN8-208ENST00000482183 ATP10BO94823 1461 aa13.96□□□□□ -0.17
CAPN8-208ENST00000482183 ABCC10Q5T3U5 1492 aa13.95□□□□□ -0.18
CAPN8-208ENST00000482183 NEFLP07196 543 aa13.95□□□□□ -0.18
CAPN8-208ENST00000482183 ANKRD50Q9ULJ7 1429 aa13.95□□□□□ -0.18
CAPN8-208ENST00000482183 MYT1Q01538 1121 aa13.94□□□□□ -0.18
CAPN8-208ENST00000482183 KDM5DQ9BY66 1539 aa13.93□□□□□ -0.18
CAPN8-208ENST00000482183 C9orf84Q5VXU9 1444 aa13.92□□□□□ -0.18
CAPN8-208ENST00000482183 L3MBTL2Q969R5 705 aa13.92□□□□□ -0.18
CAPN8-208ENST00000482183 KDM5BQ9UGL1 1544 aa13.91□□□□□ -0.18
CAPN8-208ENST00000482183 ROCK2O75116 1388 aaKnown RBP13.91□□□□□ -0.18
CAPN8-208ENST00000482183 ARHGEF12Q9NZN5 1544 aa13.9□□□□□ -0.18
CAPN8-208ENST00000482183 ARID3CA6NKF2 412 aa13.9□□□□□ -0.18
CAPN8-208ENST00000482183 ZNF777Q9ULD5 760 aaPredicted RBP13.9□□□□□ -0.18
CAPN8-208ENST00000482183 CCDC141Q6ZP82 1450 aa13.9□□□□□ -0.18
CAPN8-208ENST00000482183 SHROOM2Q13796 1616 aa13.9□□□□□ -0.19
CAPN8-208ENST00000482183 DENND4BO75064 1496 aaPredicted RBP13.89□□□□□ -0.19
CAPN8-208ENST00000482183 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
CAPN8-208ENST00000482183 TEX14Q8IWB6 1497 aa13.88□□□□□ -0.19
CAPN8-208ENST00000482183 CDC42BPAQ5VT25 1732 aa13.88□□□□□ -0.19
CAPN8-208ENST00000482183 CNTLNQ9NXG0 1405 aa13.88□□□□□ -0.19
CAPN8-208ENST00000482183 PZPP20742 1482 aa13.87□□□□□ -0.19
CAPN8-208ENST00000482183 MAST1Q9Y2H9 1570 aa13.87□□□□□ -0.19
CAPN8-208ENST00000482183 ZNF644Q9H582 1327 aaPredicted RBP13.87□□□□□ -0.19
CAPN8-208ENST00000482183 KDM6BO15054 1643 aa13.86□□□□□ -0.19
CAPN8-208ENST00000482183 ERICH6BQ5W0A0 696 aa13.86□□□□□ -0.19
CAPN8-208ENST00000482183 STAC3Q96MF2 364 aa13.86□□□□□ -0.19
CAPN8-208ENST00000482183 UHRF1BP1LA0JNW5 1464 aa13.86□□□□□ -0.19
CAPN8-208ENST00000482183 PREX2Q70Z35 1606 aa13.86□□□□□ -0.19
CAPN8-208ENST00000482183 ABCC2Q92887 1545 aa13.85□□□□□ -0.19
CAPN8-208ENST00000482183 NUP155O75694 1391 aa13.85□□□□□ -0.19
CAPN8-208ENST00000482183 UHRF1BP1Q6BDS2 1440 aa13.85□□□□□ -0.19
CAPN8-208ENST00000482183 KTN1Q86UP2 1357 aaKnown RBP13.84□□□□□ -0.19
CAPN8-208ENST00000482183 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
CAPN8-208ENST00000482183 PKD2Q13563 968 aa13.84□□□□□ -0.19
CAPN8-208ENST00000482183 CCDC7Q96M83 1385 aa13.83□□□□□ -0.19
CAPN8-208ENST00000482183 POLR1AO95602 1720 aaPredicted RBP13.83□□□□□ -0.2
CAPN8-208ENST00000482183 MBD5Q9P267 1494 aa13.81□□□□□ -0.2
CAPN8-208ENST00000482183 ARAP3Q8WWN8 1544 aa13.81□□□□□ -0.2
CAPN8-208ENST00000482183 SUPT16HQ9Y5B9 1047 aaKnown RBP13.81□□□□□ -0.2
CAPN8-208ENST00000482183 WASHC2AQ641Q2 1341 aa13.81□□□□□ -0.2
CAPN8-208ENST00000482183 SPATA31E1Q6ZUB1 1445 aa13.81□□□□□ -0.2
CAPN8-208ENST00000482183 EFCAB2Q5VUJ9 269 aa13.8□□□□□ -0.2
CAPN8-208ENST00000482183 CHD1O14646 1710 aa13.79□□□□□ -0.2
CAPN8-208ENST00000482183 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
CAPN8-208ENST00000482183 ARHGAP5Q13017 1502 aa13.79□□□□□ -0.2
CAPN8-208ENST00000482183 PLXNC1O60486 1568 aa13.79□□□□□ -0.2
CAPN8-208ENST00000482183 ERBINQ96RT1 1412 aa13.78□□□□□ -0.2
CAPN8-208ENST00000482183 RALGAPBQ86X10 1494 aa13.78□□□□□ -0.2
CAPN8-208ENST00000482183 DUOX2Q9NRD8 1548 aa13.78□□□□□ -0.2
CAPN8-208ENST00000482183 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
CAPN8-208ENST00000482183 MYO5CQ9NQX4 1742 aa13.77□□□□□ -0.21
CAPN8-208ENST00000482183 CCDC144AA2RUR9 1427 aa13.75□□□□□ -0.21
CAPN8-208ENST00000482183 RTEL1-TNFRSF6BF6WH68 1400 aa13.75□□□□□ -0.21
CAPN8-208ENST00000482183 PLCH2O75038 1416 aa13.75□□□□□ -0.21
CAPN8-208ENST00000482183 USP47Q96K76 1375 aa13.75□□□□□ -0.21
CAPN8-208ENST00000482183 HIRIP3Q9BW71 556 aaPredicted RBP13.75□□□□□ -0.21
CAPN8-208ENST00000482183 PRKRIP1Q9H875 184 aaPredicted RBP13.75□□□□□ -0.21
CAPN8-208ENST00000482183 SAMD9LQ8IVG5 1584 aa13.75□□□□□ -0.21
CAPN8-208ENST00000482183 HNRNPMP52272 730 aaKnown RBP eCLIP13.74□□□□□ -0.21
CAPN8-208ENST00000482183 UNC13BO14795 1591 aa13.74□□□□□ -0.21
CAPN8-208ENST00000482183 ATP10AO60312 1499 aa13.74□□□□□ -0.21
CAPN8-208ENST00000482183 CDC42BPBQ9Y5S2 1711 aa13.73□□□□□ -0.21
CAPN8-208ENST00000482183 FOXD1Q16676 465 aa13.73□□□□□ -0.21
CAPN8-208ENST00000482183 NBPF8Q3BBV2 869 aa13.73□□□□□ -0.21
CAPN8-208ENST00000482183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.73□□□□□ -0.21
CAPN8-208ENST00000482183 FAM135AQ9P2D6 1515 aa13.73□□□□□ -0.21
CAPN8-208ENST00000482183 CLASP1Q7Z460 1538 aa13.72□□□□□ -0.21
CAPN8-208ENST00000482183 WASHC2CQ9Y4E1 1318 aa13.71□□□□□ -0.21
CAPN8-208ENST00000482183 CARD11Q9BXL7 1154 aa13.71□□□□□ -0.21
CAPN8-208ENST00000482183 WDR7Q9Y4E6 1490 aa13.71□□□□□ -0.21
CAPN8-208ENST00000482183 EIF2AK4Q9P2K8 1649 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms