RNA–Protein interactions for RNA: ENST00000481478.1

CACNA1D-206, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 1 (best)

Gene CACNA1D, Length 5,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-206ENST00000481478 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
CACNA1D-206ENST00000481478 TOP2BQ02880 1626 aa16.64■□□□□ 0.25
CACNA1D-206ENST00000481478 LAS1LQ9Y4W2 734 aaKnown RBP16.64■□□□□ 0.25
CACNA1D-206ENST00000481478 CFTRP13569 1480 aa16.64■□□□□ 0.25
CACNA1D-206ENST00000481478 RGL3Q3MIN7 710 aa16.64■□□□□ 0.25
CACNA1D-206ENST00000481478 MCCP23508 829 aa16.63■□□□□ 0.25
CACNA1D-206ENST00000481478 CARD11Q9BXL7 1154 aa16.63■□□□□ 0.25
CACNA1D-206ENST00000481478 CHAF1AQ13111 956 aaPredicted RBP16.62■□□□□ 0.25
CACNA1D-206ENST00000481478 HSP90AB1P08238 724 aaKnown RBP16.62■□□□□ 0.25
CACNA1D-206ENST00000481478 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
CACNA1D-206ENST00000481478 IRX6P78412 446 aaPredicted RBP16.6■□□□□ 0.25
CACNA1D-206ENST00000481478 CCER2I3L3R5 266 aa16.6■□□□□ 0.25
CACNA1D-206ENST00000481478 CARMIL2Q6F5E8 1435 aa16.6■□□□□ 0.25
CACNA1D-206ENST00000481478 CLSTN1O94985 981 aa16.59■□□□□ 0.25
CACNA1D-206ENST00000481478 PLCB2Q00722 1185 aa16.59■□□□□ 0.25
CACNA1D-206ENST00000481478 NAP1L2Q9ULW6 460 aaPredicted RBP16.59■□□□□ 0.25
CACNA1D-206ENST00000481478 KANK1Q14678 1352 aa16.57■□□□□ 0.24
CACNA1D-206ENST00000481478 CHMP4AQ9BY43 222 aa16.56■□□□□ 0.24
CACNA1D-206ENST00000481478 KIAA2012Q0VF49 1180 aa16.56■□□□□ 0.24
CACNA1D-206ENST00000481478 PRXQ9BXM0 1461 aa16.56■□□□□ 0.24
CACNA1D-206ENST00000481478 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
CACNA1D-206ENST00000481478 TPRNQ4KMQ1 711 aa16.54■□□□□ 0.24
CACNA1D-206ENST00000481478 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
CACNA1D-206ENST00000481478 NEUROD2Q15784 382 aa16.53■□□□□ 0.24
CACNA1D-206ENST00000481478 HSCBQ8IWL3 235 aa16.53■□□□□ 0.24
CACNA1D-206ENST00000481478 CCDC18Q5T9S5 1454 aa16.53■□□□□ 0.24
CACNA1D-206ENST00000481478 TMX4Q9H1E5 349 aaPredicted RBP16.53■□□□□ 0.24
CACNA1D-206ENST00000481478 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.24
CACNA1D-206ENST00000481478 FRAT1Q92837 279 aaPredicted RBP16.52■□□□□ 0.23
CACNA1D-206ENST00000481478 NAP1L5Q96NT1 182 aaPredicted RBP16.52■□□□□ 0.23
CACNA1D-206ENST00000481478 MPHOSPH9Q99550 1183 aa16.52■□□□□ 0.23
CACNA1D-206ENST00000481478 CUX1P39880 1505 aa16.51■□□□□ 0.23
CACNA1D-206ENST00000481478 GAPVD1Q14C86 1478 aa16.51■□□□□ 0.23
CACNA1D-206ENST00000481478 U2SURPO15042 1029 aaKnown RBP16.51■□□□□ 0.23
CACNA1D-206ENST00000481478 PTMSP20962 102 aa16.51■□□□□ 0.23
CACNA1D-206ENST00000481478 SUPT16HQ9Y5B9 1047 aaKnown RBP16.51■□□□□ 0.23
CACNA1D-206ENST00000481478 HSPA5P11021 654 aaKnown RBP16.5■□□□□ 0.23
CACNA1D-206ENST00000481478 ARAP1Q96P48 1450 aa16.5■□□□□ 0.23
CACNA1D-206ENST00000481478 GNL2Q13823 731 aaKnown RBP16.5■□□□□ 0.23
CACNA1D-206ENST00000481478 TMF1P82094 1093 aa16.5■□□□□ 0.23
CACNA1D-206ENST00000481478 ISY1Q9ULR0 285 aaKnown RBP16.5■□□□□ 0.23
CACNA1D-206ENST00000481478 HTATSF1O43719 755 aaKnown RBP16.5■□□□□ 0.23
CACNA1D-206ENST00000481478 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
CACNA1D-206ENST00000481478 TAOK2Q9UL54 1235 aa16.49■□□□□ 0.23
CACNA1D-206ENST00000481478 RTF1Q92541 710 aaKnown RBP16.48■□□□□ 0.23
CACNA1D-206ENST00000481478 LRRC9Q6ZRR7 1453 aa16.48■□□□□ 0.23
CACNA1D-206ENST00000481478 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
CACNA1D-206ENST00000481478 CALD1Q05682 793 aaKnown RBP16.47■□□□□ 0.23
CACNA1D-206ENST00000481478 CCDC34Q96HJ3 373 aa16.47■□□□□ 0.23
CACNA1D-206ENST00000481478 RGS3P49796 1198 aa16.46■□□□□ 0.23
CACNA1D-206ENST00000481478 RRBP1Q9P2E9 1410 aaKnown RBP16.46■□□□□ 0.23
CACNA1D-206ENST00000481478 ANKRD30AQ9BXX3 1397 aa16.45■□□□□ 0.22
CACNA1D-206ENST00000481478 HDAC5Q9UQL6 1122 aa16.45■□□□□ 0.22
CACNA1D-206ENST00000481478 KIAA1211Q6ZU35 1233 aa16.44■□□□□ 0.22
CACNA1D-206ENST00000481478 DRC7Q8IY82 874 aa16.44■□□□□ 0.22
CACNA1D-206ENST00000481478 MSNP26038 577 aaKnown RBP16.44■□□□□ 0.22
CACNA1D-206ENST00000481478 PKD2Q13563 968 aa16.44■□□□□ 0.22
CACNA1D-206ENST00000481478 IPO8O15397 1037 aaKnown RBP16.43■□□□□ 0.22
CACNA1D-206ENST00000481478 CASKIN1Q8WXD9 1431 aa16.43■□□□□ 0.22
CACNA1D-206ENST00000481478 FOXD1Q16676 465 aa16.42■□□□□ 0.22
CACNA1D-206ENST00000481478 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
CACNA1D-206ENST00000481478 PHLDB1Q86UU1 1377 aa16.41■□□□□ 0.22
CACNA1D-206ENST00000481478 FGD6Q6ZV73 1430 aa16.41■□□□□ 0.22
CACNA1D-206ENST00000481478 DCAF11Q8TEB1 546 aa16.41■□□□□ 0.22
CACNA1D-206ENST00000481478 HDGFL2Q7Z4V5 671 aaPredicted RBP16.41■□□□□ 0.22
CACNA1D-206ENST00000481478 TPM4P67936 248 aa16.4■□□□□ 0.22
CACNA1D-206ENST00000481478 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
CACNA1D-206ENST00000481478 SRPK2P78362 688 aaKnown RBP16.4■□□□□ 0.22
CACNA1D-206ENST00000481478 MORC1Q86VD1 984 aa16.39■□□□□ 0.21
CACNA1D-206ENST00000481478 USP35Q9P2H5 1018 aa16.39■□□□□ 0.21
CACNA1D-206ENST00000481478 NOC3LQ8WTT2 800 aaKnown RBP16.39■□□□□ 0.21
CACNA1D-206ENST00000481478 EFCAB5A4FU69 1503 aa16.39■□□□□ 0.21
CACNA1D-206ENST00000481478 NOP58Q9Y2X3 529 aaKnown RBP16.38■□□□□ 0.21
CACNA1D-206ENST00000481478 CC2D2AQ9P2K1 1620 aa16.38■□□□□ 0.21
CACNA1D-206ENST00000481478 MYOM3Q5VTT5 1437 aa16.38■□□□□ 0.21
CACNA1D-206ENST00000481478 L3MBTL2Q969R5 705 aa16.37■□□□□ 0.21
CACNA1D-206ENST00000481478 NUP155O75694 1391 aa16.37■□□□□ 0.21
CACNA1D-206ENST00000481478 CC2D1BQ5T0F9 858 aaKnown RBP16.36■□□□□ 0.21
CACNA1D-206ENST00000481478 JPH4Q96JJ6 628 aa16.36■□□□□ 0.21
CACNA1D-206ENST00000481478 SYAP1Q96A49 352 aaPredicted RBP16.35■□□□□ 0.21
CACNA1D-206ENST00000481478 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
CACNA1D-206ENST00000481478 GPATCH3Q96I76 525 aa16.34■□□□□ 0.21
CACNA1D-206ENST00000481478 GBP4Q96PP9 640 aa16.34■□□□□ 0.21
CACNA1D-206ENST00000481478 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
CACNA1D-206ENST00000481478 RSPH4AQ5TD94 716 aa16.33■□□□□ 0.2
CACNA1D-206ENST00000481478 DNMBPQ6XZF7 1577 aa16.33■□□□□ 0.2
CACNA1D-206ENST00000481478 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
CACNA1D-206ENST00000481478 TIAM1Q13009 1591 aa16.32■□□□□ 0.2
CACNA1D-206ENST00000481478 PRM3Q9NNZ6 103 aa16.32■□□□□ 0.2
CACNA1D-206ENST00000481478 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
CACNA1D-206ENST00000481478 UACAQ9BZF9 1416 aa16.31■□□□□ 0.2
CACNA1D-206ENST00000481478 BIVM-ERCC5R4GMW8 1640 aa16.31■□□□□ 0.2
CACNA1D-206ENST00000481478 CSPP1Q1MSJ5 1256 aa16.3■□□□□ 0.2
CACNA1D-206ENST00000481478 NESP48681 1621 aa16.3■□□□□ 0.2
CACNA1D-206ENST00000481478 NCOA2Q15596 1464 aa16.3■□□□□ 0.2
CACNA1D-206ENST00000481478 GORABQ5T7V8 394 aa16.29■□□□□ 0.2
CACNA1D-206ENST00000481478 SPAG9O60271 1321 aaKnown RBP16.29■□□□□ 0.2
CACNA1D-206ENST00000481478 EFCAB2Q5VUJ9 269 aa16.28■□□□□ 0.2
CACNA1D-206ENST00000481478 CEP89Q96ST8 783 aa16.28■□□□□ 0.2
CACNA1D-206ENST00000481478 G3V3G9 751 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms