RNA–Protein interactions for RNA: ENST00000481460.1

TRAPPC10-209, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-209ENST00000481460 TOM1O60784 492 aa9.71□□□□□ -0.86
TRAPPC10-209ENST00000481460 ATXN8OSP0DMR3 200 aa9.71□□□□□ -0.86
TRAPPC10-209ENST00000481460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC10-209ENST00000481460 RAPGEF3O95398 923 aa9.7□□□□□ -0.86
TRAPPC10-209ENST00000481460 HNRNPUL2Q1KMD3 747 aaKnown RBP9.7□□□□□ -0.86
TRAPPC10-209ENST00000481460 ZNF335Q9H4Z2 1342 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC10-209ENST00000481460 NCOA1Q15788 1441 aa9.7□□□□□ -0.86
TRAPPC10-209ENST00000481460 FRMPD1Q5SYB0 1578 aa9.7□□□□□ -0.86
TRAPPC10-209ENST00000481460 SAMD1Q6SPF0 538 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC10-209ENST00000481460 ARHGEF40Q8TER5 1519 aa9.69□□□□□ -0.86
TRAPPC10-209ENST00000481460 PIP4K2BP78356 416 aa9.68□□□□□ -0.86
TRAPPC10-209ENST00000481460 SIGLEC1Q9BZZ2 1709 aa9.68□□□□□ -0.86
TRAPPC10-209ENST00000481460 FANCAO15360 1455 aa9.67□□□□□ -0.86
TRAPPC10-209ENST00000481460 ATF5Q9Y2D1 282 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC10-209ENST00000481460 CARMIL2Q6F5E8 1435 aa9.65□□□□□ -0.87
TRAPPC10-209ENST00000481460 ALKQ9UM73 1620 aa9.64□□□□□ -0.87
TRAPPC10-209ENST00000481460 C1QBPQ07021 282 aaKnown RBP9.64□□□□□ -0.87
TRAPPC10-209ENST00000481460 ARHGEF12Q9NZN5 1544 aa9.64□□□□□ -0.87
TRAPPC10-209ENST00000481460 WRNQ14191 1432 aaPredicted RBP eCLIP9.64□□□□□ -0.87
TRAPPC10-209ENST00000481460 CEBPAP49715 358 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC10-209ENST00000481460 NEO1Q92859 1461 aa9.62□□□□□ -0.87
TRAPPC10-209ENST00000481460 TTBK1Q5TCY1 1321 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC10-209ENST00000481460 KIAA0556O60303 1618 aa9.61□□□□□ -0.87
TRAPPC10-209ENST00000481460 KCNH8Q96L42 1107 aa9.6□□□□□ -0.87
TRAPPC10-209ENST00000481460 AKNAQ7Z591 1439 aa9.59□□□□□ -0.87
TRAPPC10-209ENST00000481460 PTPRKQ15262 1439 aa9.58□□□□□ -0.88
TRAPPC10-209ENST00000481460 RICTORQ6R327 1708 aa9.58□□□□□ -0.88
TRAPPC10-209ENST00000481460 SPINK5Q9NQ38 1064 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC10-209ENST00000481460 CAMSAP1Q5T5Y3 1602 aa9.56□□□□□ -0.88
TRAPPC10-209ENST00000481460 CPS1P31327 1500 aa9.56□□□□□ -0.88
TRAPPC10-209ENST00000481460 FHOD3Q2V2M9 1422 aa9.56□□□□□ -0.88
TRAPPC10-209ENST00000481460 ABCA9Q8IUA7 1624 aa9.54□□□□□ -0.88
TRAPPC10-209ENST00000481460 APLP2Q06481 763 aa9.54□□□□□ -0.88
TRAPPC10-209ENST00000481460 MLECQ14165 292 aa9.54□□□□□ -0.88
TRAPPC10-209ENST00000481460 ZMYM4Q5VZL5 1548 aa9.54□□□□□ -0.88
TRAPPC10-209ENST00000481460 DISP1Q96F81 1524 aa9.54□□□□□ -0.88
TRAPPC10-209ENST00000481460 PKD2Q13563 968 aa9.53□□□□□ -0.88
TRAPPC10-209ENST00000481460 TRAPPC8Q9Y2L5 1435 aa9.53□□□□□ -0.88
TRAPPC10-209ENST00000481460 MAGI2Q86UL8 1455 aa9.53□□□□□ -0.88
TRAPPC10-209ENST00000481460 PELP1Q8IZL8 1130 aaKnown RBP9.52□□□□□ -0.89
TRAPPC10-209ENST00000481460 NCKAP5LQ9HCH0 1330 aa9.52□□□□□ -0.89
TRAPPC10-209ENST00000481460 TCOF1Q13428 1488 aaKnown RBP9.51□□□□□ -0.89
TRAPPC10-209ENST00000481460 C3P01024 1663 aa9.51□□□□□ -0.89
TRAPPC10-209ENST00000481460 EFCAB5A4FU69 1503 aa9.51□□□□□ -0.89
TRAPPC10-209ENST00000481460 RBM33Q96EV2 1170 aaKnown RBP9.5□□□□□ -0.89
TRAPPC10-209ENST00000481460 PLA2R1Q13018 1463 aa9.5□□□□□ -0.89
TRAPPC10-209ENST00000481460 ZFYVE16Q7Z3T8 1539 aa9.5□□□□□ -0.89
TRAPPC10-209ENST00000481460 DENND4BO75064 1496 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC10-209ENST00000481460 MYT1Q01538 1121 aa9.49□□□□□ -0.89
TRAPPC10-209ENST00000481460 SETBP1Q9Y6X0 1596 aa9.49□□□□□ -0.89
TRAPPC10-209ENST00000481460 RAPGEF2Q9Y4G8 1499 aa9.47□□□□□ -0.89
TRAPPC10-209ENST00000481460 ZRANB1Q9UGI0 708 aa9.47□□□□□ -0.89
TRAPPC10-209ENST00000481460 SHANK2Q9UPX8 1470 aa9.47□□□□□ -0.89
TRAPPC10-209ENST00000481460 CAPN15O75808 1086 aa9.46□□□□□ -0.9
TRAPPC10-209ENST00000481460 ZNF219Q9P2Y4 722 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC10-209ENST00000481460 BIVM-ERCC5R4GMW8 1640 aa9.45□□□□□ -0.9
TRAPPC10-209ENST00000481460 IQGAP2Q13576 1575 aa9.45□□□□□ -0.9
TRAPPC10-209ENST00000481460 CDK12Q9NYV4 1490 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC10-209ENST00000481460 ATP10AO60312 1499 aa9.43□□□□□ -0.9
TRAPPC10-209ENST00000481460 LRP5O75197 1615 aa9.42□□□□□ -0.9
TRAPPC10-209ENST00000481460 ABCA8O94911 1581 aa9.41□□□□□ -0.9
TRAPPC10-209ENST00000481460 LRRC7Q96NW7 1537 aa9.41□□□□□ -0.9
TRAPPC10-209ENST00000481460 NPATQ14207 1427 aa9.4□□□□□ -0.9
TRAPPC10-209ENST00000481460 C9orf84Q5VXU9 1444 aa9.4□□□□□ -0.9
TRAPPC10-209ENST00000481460 CACNB1Q02641 598 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC10-209ENST00000481460 HECW1Q76N89 1606 aa9.4□□□□□ -0.9
TRAPPC10-209ENST00000481460 UGGT2Q9NYU1 1516 aa9.4□□□□□ -0.91
TRAPPC10-209ENST00000481460 IGF1RP08069 1367 aa9.39□□□□□ -0.91
TRAPPC10-209ENST00000481460 ZNF142P52746 1687 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC10-209ENST00000481460 TRIM52Q96A61 297 aa9.39□□□□□ -0.91
TRAPPC10-209ENST00000481460 SLC34A2O95436 690 aa9.38□□□□□ -0.91
TRAPPC10-209ENST00000481460 RNF17Q9BXT8 1623 aaKnown RBP9.38□□□□□ -0.91
TRAPPC10-209ENST00000481460 VWDEQ8N2E2 1590 aa9.37□□□□□ -0.91
TRAPPC10-209ENST00000481460 SUPT6HQ7KZ85 1726 aaKnown RBP9.36□□□□□ -0.91
TRAPPC10-209ENST00000481460 ZNF772Q68DY9 489 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC10-209ENST00000481460 FAM135BQ49AJ0 1406 aa9.36□□□□□ -0.91
TRAPPC10-209ENST00000481460 YY1P25490 414 aa9.35□□□□□ -0.91
TRAPPC10-209ENST00000481460 POLA2Q14181 598 aa9.35□□□□□ -0.91
TRAPPC10-209ENST00000481460 RXRBP28702 533 aa9.34□□□□□ -0.91
TRAPPC10-209ENST00000481460 DSG3P32926 999 aa9.34□□□□□ -0.91
TRAPPC10-209ENST00000481460 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
TRAPPC10-209ENST00000481460 AGLP35573 1532 aa9.34□□□□□ -0.91
TRAPPC10-209ENST00000481460 CFAP74Q9C0B2 1584 aa9.33□□□□□ -0.92
TRAPPC10-209ENST00000481460 RAPGEF6Q8TEU7 1601 aa9.32□□□□□ -0.92
TRAPPC10-209ENST00000481460 ATP10BO94823 1461 aa9.32□□□□□ -0.92
TRAPPC10-209ENST00000481460 NEURL4Q96JN8 1562 aa9.32□□□□□ -0.92
TRAPPC10-209ENST00000481460 CNTLNQ9NXG0 1405 aa9.31□□□□□ -0.92
TRAPPC10-209ENST00000481460 REREQ9P2R6 1566 aa9.31□□□□□ -0.92
TRAPPC10-209ENST00000481460 CEP170BQ9Y4F5 1589 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC10-209ENST00000481460 POLR1AO95602 1720 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC10-209ENST00000481460 STRCP1A6NGW2 1772 aa9.3□□□□□ -0.92
TRAPPC10-209ENST00000481460 MROH2AA6NES4 1674 aa9.3□□□□□ -0.92
TRAPPC10-209ENST00000481460 SENP3-EIF4A1A0A087X0R7 540 aa9.3□□□□□ -0.92
TRAPPC10-209ENST00000481460 ABCB7O75027 752 aa9.3□□□□□ -0.92
TRAPPC10-209ENST00000481460 CEP350Q5VT06 3117 aa9.3□□□□□ -0.92
TRAPPC10-209ENST00000481460 MYO3AQ8NEV4 1616 aa9.29□□□□□ -0.92
TRAPPC10-209ENST00000481460 SYNMO15061 1565 aa9.28□□□□□ -0.92
TRAPPC10-209ENST00000481460 EP400Q96L91 3159 aa9.26□□□□□ -0.93
TRAPPC10-209ENST00000481460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.26□□□□□ -0.93
TRAPPC10-209ENST00000481460 CARMIL1Q5VZK9 1371 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 435.6 ms