RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 PCF11O94913 1555 aaKnown RBP14.28□□□□□ -0.12
COMMD4-203ENST00000480484 IRX6P78412 446 aaPredicted RBP14.28□□□□□ -0.12
COMMD4-203ENST00000480484 PHLDB1Q86UU1 1377 aa14.26□□□□□ -0.13
COMMD4-203ENST00000480484 CHMP4AQ9BY43 222 aa14.25□□□□□ -0.13
COMMD4-203ENST00000480484 LRRC9Q6ZRR7 1453 aa14.25□□□□□ -0.13
COMMD4-203ENST00000480484 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
COMMD4-203ENST00000480484 RAB3GAP2Q9H2M9 1393 aa14.22□□□□□ -0.13
COMMD4-203ENST00000480484 FAM50AQ14320 339 aaKnown RBP14.21□□□□□ -0.13
COMMD4-203ENST00000480484 IQGAP2Q13576 1575 aa14.21□□□□□ -0.14
COMMD4-203ENST00000480484 MSH5O43196 834 aa14.2□□□□□ -0.14
COMMD4-203ENST00000480484 KIAA0586Q9BVV6 1533 aa14.2□□□□□ -0.14
COMMD4-203ENST00000480484 MAP3K1Q13233 1512 aa14.19□□□□□ -0.14
COMMD4-203ENST00000480484 ARID3AQ99856 593 aa14.19□□□□□ -0.14
COMMD4-203ENST00000480484 EFCAB5A4FU69 1503 aa14.19□□□□□ -0.14
COMMD4-203ENST00000480484 CFAP43Q8NDM7 1665 aa14.19□□□□□ -0.14
COMMD4-203ENST00000480484 UHRF1BP1LA0JNW5 1464 aa14.19□□□□□ -0.14
COMMD4-203ENST00000480484 MAPKBP1O60336 1514 aa14.18□□□□□ -0.14
COMMD4-203ENST00000480484 KIAA0556O60303 1618 aa14.18□□□□□ -0.14
COMMD4-203ENST00000480484 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.14
COMMD4-203ENST00000480484 SENP3-EIF4A1A0A087X0R7 540 aa14.17□□□□□ -0.14
COMMD4-203ENST00000480484 PKD2Q13563 968 aa14.14□□□□□ -0.15
COMMD4-203ENST00000480484 CASKIN1Q8WXD9 1431 aa14.14□□□□□ -0.15
COMMD4-203ENST00000480484 FYCO1Q9BQS8 1478 aa14.13□□□□□ -0.15
COMMD4-203ENST00000480484 ARHGEF11O15085 1522 aa14.12□□□□□ -0.15
COMMD4-203ENST00000480484 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
COMMD4-203ENST00000480484 SETD5Q9C0A6 1442 aa14.11□□□□□ -0.15
COMMD4-203ENST00000480484 PDIA4P13667 645 aaKnown RBP14.11□□□□□ -0.15
COMMD4-203ENST00000480484 GLI2P10070 1586 aa14.1□□□□□ -0.15
COMMD4-203ENST00000480484 ABCA8O94911 1581 aa14.09□□□□□ -0.15
COMMD4-203ENST00000480484 DHX37Q8IY37 1157 aaKnown RBP14.09□□□□□ -0.15
COMMD4-203ENST00000480484 KDM5BQ9UGL1 1544 aa14.09□□□□□ -0.15
COMMD4-203ENST00000480484 PPP1R15AO75807 674 aaPredicted RBP14.09□□□□□ -0.15
COMMD4-203ENST00000480484 LRRIQ1Q96JM4 1722 aa14.09□□□□□ -0.15
COMMD4-203ENST00000480484 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.09□□□□□ -0.15
COMMD4-203ENST00000480484 CNGB1Q14028 1251 aaPredicted RBP14.08□□□□□ -0.16
COMMD4-203ENST00000480484 ANP32CO43423 234 aa14.08□□□□□ -0.16
COMMD4-203ENST00000480484 CDK11AQ9UQ88 783 aaPredicted RBP14.08□□□□□ -0.16
COMMD4-203ENST00000480484 DISP1Q96F81 1524 aa14.07□□□□□ -0.16
COMMD4-203ENST00000480484 FMN1Q68DA7 1419 aa14.07□□□□□ -0.16
COMMD4-203ENST00000480484 KIF13AQ9H1H9 1805 aa14.06□□□□□ -0.16
COMMD4-203ENST00000480484 ADCY10Q96PN6 1610 aa14.06□□□□□ -0.16
COMMD4-203ENST00000480484 CCDC184Q52MB2 194 aa14.05□□□□□ -0.16
COMMD4-203ENST00000480484 MTUS2Q5JR59 1369 aa14.04□□□□□ -0.16
COMMD4-203ENST00000480484 CDK11BP21127 795 aaKnown RBP14.04□□□□□ -0.16
COMMD4-203ENST00000480484 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
COMMD4-203ENST00000480484 FGD6Q6ZV73 1430 aa14.03□□□□□ -0.16
COMMD4-203ENST00000480484 FANCIQ9NVI1 1328 aa14.02□□□□□ -0.16
COMMD4-203ENST00000480484 PTPRKQ15262 1439 aa14.01□□□□□ -0.17
COMMD4-203ENST00000480484 NECTIN2Q92692 538 aa14□□□□□ -0.17
COMMD4-203ENST00000480484 DNAJC5Q9H3Z4 198 aa14□□□□□ -0.17
COMMD4-203ENST00000480484 MAP3K4Q9Y6R4 1608 aa13.99□□□□□ -0.17
COMMD4-203ENST00000480484 CCER2I3L3R5 266 aa13.99□□□□□ -0.17
COMMD4-203ENST00000480484 DEKP35659 375 aaKnown RBP13.99□□□□□ -0.17
COMMD4-203ENST00000480484 MAGI3Q5TCQ9 1506 aa13.99□□□□□ -0.17
COMMD4-203ENST00000480484 NCOA2Q15596 1464 aa13.99□□□□□ -0.17
COMMD4-203ENST00000480484 BBXQ8WY36 941 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-203ENST00000480484 HNRNPUQ00839 825 aaKnown RBP eCLIP13.98□□□□□ -0.17
COMMD4-203ENST00000480484 CCDC9Q9Y3X0 531 aaKnown RBP13.98□□□□□ -0.17
COMMD4-203ENST00000480484 PPRC1Q5VV67 1664 aaKnown RBP13.98□□□□□ -0.17
COMMD4-203ENST00000480484 ABCC2Q92887 1545 aa13.96□□□□□ -0.18
COMMD4-203ENST00000480484 ERCC6L2Q5T890 1561 aa13.95□□□□□ -0.18
COMMD4-203ENST00000480484 ZCCHC11Q5TAX3 1644 aaKnown RBP13.94□□□□□ -0.18
COMMD4-203ENST00000480484 MYOM3Q5VTT5 1437 aa13.94□□□□□ -0.18
COMMD4-203ENST00000480484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.93□□□□□ -0.18
COMMD4-203ENST00000480484 CDK13Q14004 1512 aaKnown RBP13.93□□□□□ -0.18
COMMD4-203ENST00000480484 ARAP3Q8WWN8 1544 aa13.93□□□□□ -0.18
COMMD4-203ENST00000480484 RAPGEF6Q8TEU7 1601 aa13.92□□□□□ -0.18
COMMD4-203ENST00000480484 CCDC18Q5T9S5 1454 aa13.92□□□□□ -0.18
COMMD4-203ENST00000480484 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
COMMD4-203ENST00000480484 CHIC2Q9UKJ5 165 aa13.92□□□□□ -0.18
COMMD4-203ENST00000480484 SUPT6HQ7KZ85 1726 aaKnown RBP13.92□□□□□ -0.18
COMMD4-203ENST00000480484 BRPF1P55201 1214 aaPredicted RBP13.91□□□□□ -0.18
COMMD4-203ENST00000480484 C1orf115Q9H7X2 142 aa13.91□□□□□ -0.18
COMMD4-203ENST00000480484 EHBP1L1Q8N3D4 1523 aa13.91□□□□□ -0.18
COMMD4-203ENST00000480484 PTPN23Q9H3S7 1636 aa13.9□□□□□ -0.18
COMMD4-203ENST00000480484 RRP7BPQ9NSQ0 103 aa13.9□□□□□ -0.18
COMMD4-203ENST00000480484 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
COMMD4-203ENST00000480484 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
COMMD4-203ENST00000480484 HFM1A2PYH4 1435 aa13.88□□□□□ -0.19
COMMD4-203ENST00000480484 NAIPQ13075 1403 aa13.88□□□□□ -0.19
COMMD4-203ENST00000480484 C11orf95C9JLR9 678 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-203ENST00000480484 DIP2BQ9P265 1576 aa13.88□□□□□ -0.19
COMMD4-203ENST00000480484 EPRSP07814 1512 aaKnown RBP13.88□□□□□ -0.19
COMMD4-203ENST00000480484 ABCA9Q8IUA7 1624 aa13.88□□□□□ -0.19
COMMD4-203ENST00000480484 HECW1Q76N89 1606 aa13.87□□□□□ -0.19
COMMD4-203ENST00000480484 IFNLR1Q8IU57 520 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-203ENST00000480484 UBE2Q2Q8WVN8 375 aa13.86□□□□□ -0.19
COMMD4-203ENST00000480484 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
COMMD4-203ENST00000480484 CFAP74Q9C0B2 1584 aa13.85□□□□□ -0.19
COMMD4-203ENST00000480484 ZNF428Q96B54 188 aa13.85□□□□□ -0.19
COMMD4-203ENST00000480484 PPP4R2Q9NY27 417 aa13.85□□□□□ -0.19
COMMD4-203ENST00000480484 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
COMMD4-203ENST00000480484 WASHC2AQ641Q2 1341 aa13.84□□□□□ -0.19
COMMD4-203ENST00000480484 UACAQ9BZF9 1416 aa13.83□□□□□ -0.19
COMMD4-203ENST00000480484 SPRYD3Q8NCJ5 442 aa13.83□□□□□ -0.19
COMMD4-203ENST00000480484 ANO8Q9HCE9 1232 aaPredicted RBP13.83□□□□□ -0.19
COMMD4-203ENST00000480484 KDM6BO15054 1643 aa13.83□□□□□ -0.2
COMMD4-203ENST00000480484 NOP58Q9Y2X3 529 aaKnown RBP13.83□□□□□ -0.2
COMMD4-203ENST00000480484 TONSLQ96HA7 1378 aa13.82□□□□□ -0.2
COMMD4-203ENST00000480484 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms