RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 CCER2I3L3R5 266 aa11.96□□□□□ -0.5
USP30-206ENST00000479219 DENND4BO75064 1496 aaPredicted RBP11.94□□□□□ -0.5
USP30-206ENST00000479219 CAMSAP2Q08AD1 1489 aa11.94□□□□□ -0.5
USP30-206ENST00000479219 DDX10Q13206 875 aaKnown RBP11.94□□□□□ -0.5
USP30-206ENST00000479219 ADGRL2O95490 1459 aa11.94□□□□□ -0.5
USP30-206ENST00000479219 KIF14Q15058 1648 aa11.94□□□□□ -0.5
USP30-206ENST00000479219 TRIM52Q96A61 297 aa11.93□□□□□ -0.5
USP30-206ENST00000479219 CHIC2Q9UKJ5 165 aa11.93□□□□□ -0.5
USP30-206ENST00000479219 ABCA8O94911 1581 aa11.93□□□□□ -0.5
USP30-206ENST00000479219 SUPT16HQ9Y5B9 1047 aaKnown RBP11.93□□□□□ -0.5
USP30-206ENST00000479219 ANP32CO43423 234 aa11.93□□□□□ -0.5
USP30-206ENST00000479219 MPHOSPH9Q99550 1183 aa11.93□□□□□ -0.5
USP30-206ENST00000479219 PLB1Q6P1J6 1458 aa11.92□□□□□ -0.5
USP30-206ENST00000479219 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
USP30-206ENST00000479219 RPRD2Q5VT52 1461 aaKnown RBP11.91□□□□□ -0.5
USP30-206ENST00000479219 GPATCH8Q9UKJ3 1502 aaKnown RBP11.91□□□□□ -0.5
USP30-206ENST00000479219 SHANK2Q9UPX8 1470 aa11.91□□□□□ -0.5
USP30-206ENST00000479219 PRG4Q92954 1404 aaPredicted RBP11.9□□□□□ -0.5
USP30-206ENST00000479219 JPH4Q96JJ6 628 aa11.9□□□□□ -0.5
USP30-206ENST00000479219 CDC42BPAQ5VT25 1732 aa11.9□□□□□ -0.5
USP30-206ENST00000479219 CFDP1Q9UEE9 299 aaPredicted RBP11.89□□□□□ -0.51
USP30-206ENST00000479219 POLR1AO95602 1720 aaPredicted RBP11.89□□□□□ -0.51
USP30-206ENST00000479219 ANKRD30BQ9BXX2 1392 aa11.88□□□□□ -0.51
USP30-206ENST00000479219 ARID3CA6NKF2 412 aa11.88□□□□□ -0.51
USP30-206ENST00000479219 NCOA1Q15788 1441 aa11.88□□□□□ -0.51
USP30-206ENST00000479219 ANP32EQ9BTT0 268 aa11.87□□□□□ -0.51
USP30-206ENST00000479219 ANKRD30AQ9BXX3 1397 aa11.87□□□□□ -0.51
USP30-206ENST00000479219 TEX14Q8IWB6 1497 aa11.86□□□□□ -0.51
USP30-206ENST00000479219 EIF4G2P78344 907 aaKnown RBP eCLIP11.86□□□□□ -0.51
USP30-206ENST00000479219 FBLN2P98095 1184 aa11.86□□□□□ -0.51
USP30-206ENST00000479219 ABCC10Q5T3U5 1492 aa11.85□□□□□ -0.51
USP30-206ENST00000479219 ARHGEF5Q12774 1597 aa11.85□□□□□ -0.51
USP30-206ENST00000479219 PLEKHD1A6NEE1 506 aa11.85□□□□□ -0.51
USP30-206ENST00000479219 TSHZ2Q9NRE2 1034 aa11.85□□□□□ -0.51
USP30-206ENST00000479219 PZPP20742 1482 aa11.84□□□□□ -0.51
USP30-206ENST00000479219 ZNF644Q9H582 1327 aaPredicted RBP11.84□□□□□ -0.51
USP30-206ENST00000479219 ATP10BO94823 1461 aa11.84□□□□□ -0.51
USP30-206ENST00000479219 SLC24A1O60721 1099 aa11.83□□□□□ -0.51
USP30-206ENST00000479219 SLC4A1APQ9BWU0 796 aaKnown RBP11.83□□□□□ -0.52
USP30-206ENST00000479219 KDM5DQ9BY66 1539 aa11.83□□□□□ -0.52
USP30-206ENST00000479219 KIAA1107Q9UPP5 1409 aa11.83□□□□□ -0.52
USP30-206ENST00000479219 L3MBTL2Q969R5 705 aa11.82□□□□□ -0.52
USP30-206ENST00000479219 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
USP30-206ENST00000479219 CHD1O14646 1710 aa11.81□□□□□ -0.52
USP30-206ENST00000479219 PREX2Q70Z35 1606 aa11.81□□□□□ -0.52
USP30-206ENST00000479219 HIRIP3Q9BW71 556 aaPredicted RBP11.81□□□□□ -0.52
USP30-206ENST00000479219 HSPA5P11021 654 aaKnown RBP11.81□□□□□ -0.52
USP30-206ENST00000479219 ANKRD50Q9ULJ7 1429 aa11.81□□□□□ -0.52
USP30-206ENST00000479219 CNTLNQ9NXG0 1405 aa11.8□□□□□ -0.52
USP30-206ENST00000479219 DNAJC5Q9H3Z4 198 aa11.8□□□□□ -0.52
USP30-206ENST00000479219 C9orf84Q5VXU9 1444 aa11.8□□□□□ -0.52
USP30-206ENST00000479219 PTPRGP23470 1445 aa11.79□□□□□ -0.52
USP30-206ENST00000479219 KCNH8Q96L42 1107 aa11.79□□□□□ -0.52
USP30-206ENST00000479219 MBD5Q9P267 1494 aa11.79□□□□□ -0.52
USP30-206ENST00000479219 ARHGEF12Q9NZN5 1544 aa11.78□□□□□ -0.52
USP30-206ENST00000479219 WASHC2AQ641Q2 1341 aa11.78□□□□□ -0.52
USP30-206ENST00000479219 RSPH4AQ5TD94 716 aa11.78□□□□□ -0.52
USP30-206ENST00000479219 BCL11AQ9H165 835 aa11.77□□□□□ -0.53
USP30-206ENST00000479219 CDC42BPBQ9Y5S2 1711 aa11.77□□□□□ -0.53
USP30-206ENST00000479219 ZNF777Q9ULD5 760 aaPredicted RBP11.76□□□□□ -0.53
USP30-206ENST00000479219 CCDC141Q6ZP82 1450 aa11.76□□□□□ -0.53
USP30-206ENST00000479219 MAST1Q9Y2H9 1570 aa11.76□□□□□ -0.53
USP30-206ENST00000479219 TSPY4P0CV99 314 aa11.76□□□□□ -0.53
USP30-206ENST00000479219 TSPY10P0CW01 314 aa11.76□□□□□ -0.53
USP30-206ENST00000479219 SPATA31E1Q6ZUB1 1445 aa11.76□□□□□ -0.53
USP30-206ENST00000479219 CCDC7Q96M83 1385 aa11.76□□□□□ -0.53
USP30-206ENST00000479219 FOXD1Q16676 465 aa11.75□□□□□ -0.53
USP30-206ENST00000479219 PLEKHH2Q8IVE3 1493 aa11.74□□□□□ -0.53
USP30-206ENST00000479219 SAMD9LQ8IVG5 1584 aa11.74□□□□□ -0.53
USP30-206ENST00000479219 NEFLP07196 543 aa11.74□□□□□ -0.53
USP30-206ENST00000479219 MYO5CQ9NQX4 1742 aa11.74□□□□□ -0.53
USP30-206ENST00000479219 ARID4BQ4LE39 1312 aaPredicted RBP11.73□□□□□ -0.53
USP30-206ENST00000479219 UHRF1BP1Q6BDS2 1440 aa11.73□□□□□ -0.53
USP30-206ENST00000479219 ABCC2Q92887 1545 aa11.73□□□□□ -0.53
USP30-206ENST00000479219 KIF15Q9NS87 1388 aa11.72□□□□□ -0.53
USP30-206ENST00000479219 PLXNC1O60486 1568 aa11.72□□□□□ -0.53
USP30-206ENST00000479219 NUP155O75694 1391 aa11.71□□□□□ -0.53
USP30-206ENST00000479219 PKD2Q13563 968 aa11.71□□□□□ -0.54
USP30-206ENST00000479219 NBPF8Q3BBV2 869 aa11.71□□□□□ -0.54
USP30-206ENST00000479219 RALGAPBQ86X10 1494 aa11.71□□□□□ -0.54
USP30-206ENST00000479219 UNC13BO14795 1591 aa11.7□□□□□ -0.54
USP30-206ENST00000479219 KDM5CP41229 1560 aa11.7□□□□□ -0.54
USP30-206ENST00000479219 ARHGAP5Q13017 1502 aa11.69□□□□□ -0.54
USP30-206ENST00000479219 TTC37Q6PGP7 1564 aa11.69□□□□□ -0.54
USP30-206ENST00000479219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.68□□□□□ -0.54
USP30-206ENST00000479219 ROCK2O75116 1388 aaKnown RBP11.68□□□□□ -0.54
USP30-206ENST00000479219 FAM135AQ9P2D6 1515 aa11.68□□□□□ -0.54
USP30-206ENST00000479219 UHRF1BP1LA0JNW5 1464 aa11.67□□□□□ -0.54
USP30-206ENST00000479219 SYCP2Q9BX26 1530 aa11.67□□□□□ -0.54
USP30-206ENST00000479219 USP47Q96K76 1375 aa11.67□□□□□ -0.54
USP30-206ENST00000479219 KIF7Q2M1P5 1343 aa11.67□□□□□ -0.54
USP30-206ENST00000479219 PRKRIP1Q9H875 184 aaPredicted RBP11.66□□□□□ -0.54
USP30-206ENST00000479219 IQGAP3Q86VI3 1631 aa11.66□□□□□ -0.54
USP30-206ENST00000479219 CLASP1Q7Z460 1538 aa11.65□□□□□ -0.54
USP30-206ENST00000479219 FKBP8Q14318 412 aa11.65□□□□□ -0.54
USP30-206ENST00000479219 DUOX2Q9NRD8 1548 aa11.64□□□□□ -0.55
USP30-206ENST00000479219 ZCCHC11Q5TAX3 1644 aaKnown RBP11.64□□□□□ -0.55
USP30-206ENST00000479219 HNRNPMP52272 730 aaKnown RBP eCLIP11.64□□□□□ -0.55
USP30-206ENST00000479219 HNRNPUQ00839 825 aaKnown RBP eCLIP11.64□□□□□ -0.55
USP30-206ENST00000479219 BCORL1Q5H9F3 1711 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms