RNA–Protein interactions for RNA: ENST00000479207.1

NELFCD-207, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 3

Gene NELFCD, Length 1,112 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-207ENST00000479207 MLECQ14165 292 aa19.17■□□□□ 0.66
NELFCD-207ENST00000479207 P3H3Q8IVL6 736 aa19.15■□□□□ 0.66
NELFCD-207ENST00000479207 IQSEC2Q5JU85 1478 aa19.13■□□□□ 0.65
NELFCD-207ENST00000479207 PTPRTO14522 1441 aa19.12■□□□□ 0.65
NELFCD-207ENST00000479207 UHRF1BP1Q6BDS2 1440 aa19.12■□□□□ 0.65
NELFCD-207ENST00000479207 CEBPAP49715 358 aaPredicted RBP19.11■□□□□ 0.65
NELFCD-207ENST00000479207 C9orf84Q5VXU9 1444 aa19.09■□□□□ 0.65
NELFCD-207ENST00000479207 C3P01024 1663 aa19.09■□□□□ 0.65
NELFCD-207ENST00000479207 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
NELFCD-207ENST00000479207 SETD1BQ9UPS6 1966 aaKnown RBP19.07■□□□□ 0.64
NELFCD-207ENST00000479207 ATP10AO60312 1499 aa19.07■□□□□ 0.64
NELFCD-207ENST00000479207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
NELFCD-207ENST00000479207 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
NELFCD-207ENST00000479207 NCOA1Q15788 1441 aa19.02■□□□□ 0.64
NELFCD-207ENST00000479207 SCAPERQ9BY12 1400 aa19.02■□□□□ 0.64
NELFCD-207ENST00000479207 MED1Q15648 1581 aaPredicted RBP19.01■□□□□ 0.63
NELFCD-207ENST00000479207 EEA1Q15075 1411 aa19■□□□□ 0.63
NELFCD-207ENST00000479207 DIP2CQ9Y2E4 1556 aa19■□□□□ 0.63
NELFCD-207ENST00000479207 KDM5CP41229 1560 aa18.99■□□□□ 0.63
NELFCD-207ENST00000479207 MYO5CQ9NQX4 1742 aa18.97■□□□□ 0.63
NELFCD-207ENST00000479207 ABCA6Q8N139 1617 aa18.97■□□□□ 0.63
NELFCD-207ENST00000479207 REREQ9P2R6 1566 aa18.97■□□□□ 0.63
NELFCD-207ENST00000479207 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.63
NELFCD-207ENST00000479207 FAM9AQ8IZU1 332 aaPredicted RBP18.96■□□□□ 0.63
NELFCD-207ENST00000479207 PLCH2O75038 1416 aa18.95■□□□□ 0.62
NELFCD-207ENST00000479207 CAMSAP1Q5T5Y3 1602 aa18.93■□□□□ 0.62
NELFCD-207ENST00000479207 PLEKHD1A6NEE1 506 aa18.93■□□□□ 0.62
NELFCD-207ENST00000479207 ZNF518AQ6AHZ1 1483 aa18.91■□□□□ 0.62
NELFCD-207ENST00000479207 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
NELFCD-207ENST00000479207 KIF14Q15058 1648 aa18.89■□□□□ 0.62
NELFCD-207ENST00000479207 ZNF335Q9H4Z2 1342 aaPredicted RBP18.89■□□□□ 0.61
NELFCD-207ENST00000479207 TRAPPC8Q9Y2L5 1435 aa18.88■□□□□ 0.61
NELFCD-207ENST00000479207 UBAP1LF5GYI3 381 aa18.87■□□□□ 0.61
NELFCD-207ENST00000479207 ZNF142P52746 1687 aaPredicted RBP18.86■□□□□ 0.61
NELFCD-207ENST00000479207 AGLP35573 1532 aa18.86■□□□□ 0.61
NELFCD-207ENST00000479207 MYO3AQ8NEV4 1616 aa18.84■□□□□ 0.61
NELFCD-207ENST00000479207 MROH2AA6NES4 1674 aa18.83■□□□□ 0.61
NELFCD-207ENST00000479207 SUPT6HQ7KZ85 1726 aaKnown RBP18.81■□□□□ 0.6
NELFCD-207ENST00000479207 ARHGAP5Q13017 1502 aa18.8■□□□□ 0.6
NELFCD-207ENST00000479207 MLH3Q9UHC1 1453 aa18.79■□□□□ 0.6
NELFCD-207ENST00000479207 AFAP1Q8N556 730 aa18.79■□□□□ 0.6
NELFCD-207ENST00000479207 KIDINS220Q9ULH0 1771 aa18.78■□□□□ 0.6
NELFCD-207ENST00000479207 TCOF1Q13428 1488 aaKnown RBP18.78■□□□□ 0.6
NELFCD-207ENST00000479207 CDC42BPBQ9Y5S2 1711 aa18.78■□□□□ 0.6
NELFCD-207ENST00000479207 NPATQ14207 1427 aa18.78■□□□□ 0.6
NELFCD-207ENST00000479207 HSPA1LP34931 641 aa18.78■□□□□ 0.6
NELFCD-207ENST00000479207 RANGAP1P46060 587 aaPredicted RBP18.78■□□□□ 0.6
NELFCD-207ENST00000479207 ITSN2Q9NZM3 1697 aa18.78■□□□□ 0.6
NELFCD-207ENST00000479207 PLA2R1Q13018 1463 aa18.77■□□□□ 0.6
NELFCD-207ENST00000479207 NCKAP5LQ9HCH0 1330 aa18.77■□□□□ 0.6
NELFCD-207ENST00000479207 CEP170BQ9Y4F5 1589 aaPredicted RBP18.77■□□□□ 0.6
NELFCD-207ENST00000479207 CNTLNQ9NXG0 1405 aa18.77■□□□□ 0.6
NELFCD-207ENST00000479207 ABCC1P33527 1531 aa18.77■□□□□ 0.6
NELFCD-207ENST00000479207 EFCAB2Q5VUJ9 269 aa18.76■□□□□ 0.59
NELFCD-207ENST00000479207 ALKQ9UM73 1620 aa18.74■□□□□ 0.59
NELFCD-207ENST00000479207 LRRIQ1Q96JM4 1722 aa18.73■□□□□ 0.59
NELFCD-207ENST00000479207 PREX2Q70Z35 1606 aa18.73■□□□□ 0.59
NELFCD-207ENST00000479207 CLTCQ00610 1675 aaKnown RBP18.72■□□□□ 0.59
NELFCD-207ENST00000479207 POLR1AO95602 1720 aaPredicted RBP18.69■□□□□ 0.58
NELFCD-207ENST00000479207 NEURL4Q96JN8 1562 aa18.68■□□□□ 0.58
NELFCD-207ENST00000479207 ESF1Q9H501 851 aaKnown RBP18.68■□□□□ 0.58
NELFCD-207ENST00000479207 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
NELFCD-207ENST00000479207 PIP4K2BP78356 416 aa18.67■□□□□ 0.58
NELFCD-207ENST00000479207 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
NELFCD-207ENST00000479207 MYT1LQ9UL68 1186 aa18.66■□□□□ 0.58
NELFCD-207ENST00000479207 CPS1P31327 1500 aa18.65■□□□□ 0.58
NELFCD-207ENST00000479207 PKD2Q13563 968 aa18.65■□□□□ 0.58
NELFCD-207ENST00000479207 ZMYM3Q14202 1370 aa18.65■□□□□ 0.58
NELFCD-207ENST00000479207 PTPRKQ15262 1439 aa18.64■□□□□ 0.57
NELFCD-207ENST00000479207 PLXNC1O60486 1568 aa18.64■□□□□ 0.57
NELFCD-207ENST00000479207 SAMD9LQ8IVG5 1584 aa18.64■□□□□ 0.57
NELFCD-207ENST00000479207 PHF23Q9BUL5 403 aaPredicted RBP18.63■□□□□ 0.57
NELFCD-207ENST00000479207 DNMT1P26358 1616 aaKnown RBP18.63■□□□□ 0.57
NELFCD-207ENST00000479207 EHMT2Q96KQ7 1210 aa18.62■□□□□ 0.57
NELFCD-207ENST00000479207 PPP6R1Q9UPN7 881 aa18.62■□□□□ 0.57
NELFCD-207ENST00000479207 CDC42BPAQ5VT25 1732 aa18.62■□□□□ 0.57
NELFCD-207ENST00000479207 UBTFP17480 764 aaKnown RBP18.61■□□□□ 0.57
NELFCD-207ENST00000479207 VWDEQ8N2E2 1590 aa18.6■□□□□ 0.57
NELFCD-207ENST00000479207 SHANK2Q9UPX8 1470 aa18.58■□□□□ 0.57
NELFCD-207ENST00000479207 CLIP1P30622 1438 aa18.57■□□□□ 0.56
NELFCD-207ENST00000479207 INO80Q9ULG1 1556 aaPredicted RBP18.57■□□□□ 0.56
NELFCD-207ENST00000479207 A2ML1A8K2U0 1454 aa18.57■□□□□ 0.56
NELFCD-207ENST00000479207 SYCP2Q9BX26 1530 aa18.56■□□□□ 0.56
NELFCD-207ENST00000479207 FMN1Q68DA7 1419 aa18.56■□□□□ 0.56
NELFCD-207ENST00000479207 TOM1O60784 492 aa18.55■□□□□ 0.56
NELFCD-207ENST00000479207 ATP7AQ04656 1500 aa18.54■□□□□ 0.56
NELFCD-207ENST00000479207 STRCP1A6NGW2 1772 aa18.54■□□□□ 0.56
NELFCD-207ENST00000479207 ARHGAP35Q9NRY4 1499 aa18.53■□□□□ 0.56
NELFCD-207ENST00000479207 RGS17Q9UGC6 210 aaPredicted RBP18.53■□□□□ 0.56
NELFCD-207ENST00000479207 RNF17Q9BXT8 1623 aaKnown RBP18.52■□□□□ 0.56
NELFCD-207ENST00000479207 ATP1B4Q9UN42 357 aaPredicted RBP18.51■□□□□ 0.55
NELFCD-207ENST00000479207 CDK11AQ9UQ88 783 aaPredicted RBP18.51■□□□□ 0.55
NELFCD-207ENST00000479207 SETD1AO15047 1707 aaKnown RBP18.5■□□□□ 0.55
NELFCD-207ENST00000479207 SYNMO15061 1565 aa18.47■□□□□ 0.55
NELFCD-207ENST00000479207 A2MP01023 1474 aa18.47■□□□□ 0.55
NELFCD-207ENST00000479207 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
NELFCD-207ENST00000479207 IQGAP1P46940 1657 aa18.45■□□□□ 0.54
NELFCD-207ENST00000479207 DEPDC5O75140 1603 aa18.45■□□□□ 0.54
NELFCD-207ENST00000479207 ADGBQ8N7X0 1667 aa18.44■□□□□ 0.54
NELFCD-207ENST00000479207 LOC105371045A0A1W2PR82 267 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms