RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
VPS45-208ENST00000478999 LOC105371045A0A1W2PR82 267 aa13.28□□□□□ -0.28
VPS45-208ENST00000478999 EEA1Q15075 1411 aa13.28□□□□□ -0.28
VPS45-208ENST00000478999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.28□□□□□ -0.28
VPS45-208ENST00000478999 ARHGEF12Q9NZN5 1544 aa13.28□□□□□ -0.28
VPS45-208ENST00000478999 MLECQ14165 292 aa13.27□□□□□ -0.29
VPS45-208ENST00000478999 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
VPS45-208ENST00000478999 SETD1BQ9UPS6 1966 aaKnown RBP13.26□□□□□ -0.29
VPS45-208ENST00000478999 MAGI2Q86UL8 1455 aa13.25□□□□□ -0.29
VPS45-208ENST00000478999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
VPS45-208ENST00000478999 RANGAP1P46060 587 aaPredicted RBP13.25□□□□□ -0.29
VPS45-208ENST00000478999 HNRNPUL2Q1KMD3 747 aaKnown RBP13.25□□□□□ -0.29
VPS45-208ENST00000478999 LTBP4Q8N2S1 1624 aa13.22□□□□□ -0.29
VPS45-208ENST00000478999 CEBPAP49715 358 aaPredicted RBP13.21□□□□□ -0.29
VPS45-208ENST00000478999 C3P01024 1663 aa13.21□□□□□ -0.3
VPS45-208ENST00000478999 HRCP23327 699 aa13.19□□□□□ -0.3
VPS45-208ENST00000478999 DMRT2Q9Y5R5 561 aa13.19□□□□□ -0.3
VPS45-208ENST00000478999 C9orf84Q5VXU9 1444 aa13.19□□□□□ -0.3
VPS45-208ENST00000478999 UHRF1BP1Q6BDS2 1440 aa13.19□□□□□ -0.3
VPS45-208ENST00000478999 ATP10AO60312 1499 aa13.18□□□□□ -0.3
VPS45-208ENST00000478999 TRIM26Q12899 539 aaPredicted RBP13.18□□□□□ -0.3
VPS45-208ENST00000478999 PTPRTO14522 1441 aa13.18□□□□□ -0.3
VPS45-208ENST00000478999 MYO5CQ9NQX4 1742 aa13.17□□□□□ -0.3
VPS45-208ENST00000478999 SCAPERQ9BY12 1400 aa13.17□□□□□ -0.3
VPS45-208ENST00000478999 PLEKHD1A6NEE1 506 aa13.17□□□□□ -0.3
VPS45-208ENST00000478999 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
VPS45-208ENST00000478999 EHMT2Q96KQ7 1210 aa13.15□□□□□ -0.3
VPS45-208ENST00000478999 PCGF6Q9BYE7 350 aa13.14□□□□□ -0.31
VPS45-208ENST00000478999 CDK13Q14004 1512 aaKnown RBP13.13□□□□□ -0.31
VPS45-208ENST00000478999 PLCH2O75038 1416 aa13.13□□□□□ -0.31
VPS45-208ENST00000478999 DIP2CQ9Y2E4 1556 aa13.12□□□□□ -0.31
VPS45-208ENST00000478999 KDM5CP41229 1560 aa13.11□□□□□ -0.31
VPS45-208ENST00000478999 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
VPS45-208ENST00000478999 ABCA6Q8N139 1617 aa13.1□□□□□ -0.31
VPS45-208ENST00000478999 REREQ9P2R6 1566 aa13.1□□□□□ -0.31
VPS45-208ENST00000478999 NCOA1Q15788 1441 aa13.09□□□□□ -0.31
VPS45-208ENST00000478999 FOXD1Q16676 465 aa13.09□□□□□ -0.31
VPS45-208ENST00000478999 KIF14Q15058 1648 aa13.08□□□□□ -0.32
VPS45-208ENST00000478999 ZNF518AQ6AHZ1 1483 aa13.08□□□□□ -0.32
VPS45-208ENST00000478999 SUPT6HQ7KZ85 1726 aaKnown RBP13.07□□□□□ -0.32
VPS45-208ENST00000478999 CAMSAP1Q5T5Y3 1602 aa13.06□□□□□ -0.32
VPS45-208ENST00000478999 ATP1B4Q9UN42 357 aaPredicted RBP13.06□□□□□ -0.32
VPS45-208ENST00000478999 CDC42BPBQ9Y5S2 1711 aa13.05□□□□□ -0.32
VPS45-208ENST00000478999 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
VPS45-208ENST00000478999 MED1Q15648 1581 aaPredicted RBP13.04□□□□□ -0.32
VPS45-208ENST00000478999 MROH2AA6NES4 1674 aa13.04□□□□□ -0.32
VPS45-208ENST00000478999 LRRIQ1Q96JM4 1722 aa13.04□□□□□ -0.32
VPS45-208ENST00000478999 AGLP35573 1532 aa13.03□□□□□ -0.32
VPS45-208ENST00000478999 EFCAB2Q5VUJ9 269 aa13.03□□□□□ -0.32
VPS45-208ENST00000478999 ARHGAP5Q13017 1502 aa13.03□□□□□ -0.32
VPS45-208ENST00000478999 ZNF142P52746 1687 aaPredicted RBP13.02□□□□□ -0.32
VPS45-208ENST00000478999 KIDINS220Q9ULH0 1771 aa13.02□□□□□ -0.32
VPS45-208ENST00000478999 AFAP1Q8N556 730 aa13.02□□□□□ -0.33
VPS45-208ENST00000478999 FMN1Q68DA7 1419 aa13.02□□□□□ -0.33
VPS45-208ENST00000478999 ITSN2Q9NZM3 1697 aa13.02□□□□□ -0.33
VPS45-208ENST00000478999 UBAP1LF5GYI3 381 aa13.01□□□□□ -0.33
VPS45-208ENST00000478999 ZNF335Q9H4Z2 1342 aaPredicted RBP13.01□□□□□ -0.33
VPS45-208ENST00000478999 MLH3Q9UHC1 1453 aa13□□□□□ -0.33
VPS45-208ENST00000478999 MYO3AQ8NEV4 1616 aa12.99□□□□□ -0.33
VPS45-208ENST00000478999 MYT1LQ9UL68 1186 aa12.98□□□□□ -0.33
VPS45-208ENST00000478999 PREX2Q70Z35 1606 aa12.98□□□□□ -0.33
VPS45-208ENST00000478999 ABCC1P33527 1531 aa12.98□□□□□ -0.33
VPS45-208ENST00000478999 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
VPS45-208ENST00000478999 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
VPS45-208ENST00000478999 CLTCQ00610 1675 aaKnown RBP12.97□□□□□ -0.33
VPS45-208ENST00000478999 ZEB1P37275 1124 aaPredicted RBP12.97□□□□□ -0.33
VPS45-208ENST00000478999 NPATQ14207 1427 aa12.96□□□□□ -0.33
VPS45-208ENST00000478999 CEP162Q5TB80 1403 aa12.96□□□□□ -0.33
VPS45-208ENST00000478999 CNTLNQ9NXG0 1405 aa12.96□□□□□ -0.33
VPS45-208ENST00000478999 ESF1Q9H501 851 aaKnown RBP12.96□□□□□ -0.33
VPS45-208ENST00000478999 CEP170BQ9Y4F5 1589 aaPredicted RBP12.95□□□□□ -0.34
VPS45-208ENST00000478999 CDK11AQ9UQ88 783 aaPredicted RBP12.95□□□□□ -0.34
VPS45-208ENST00000478999 PLA2R1Q13018 1463 aa12.95□□□□□ -0.34
VPS45-208ENST00000478999 CLIP1P30622 1438 aa12.95□□□□□ -0.34
VPS45-208ENST00000478999 CDC42BPAQ5VT25 1732 aa12.94□□□□□ -0.34
VPS45-208ENST00000478999 TCOF1Q13428 1488 aaKnown RBP12.94□□□□□ -0.34
VPS45-208ENST00000478999 TROQ12816 1431 aaPredicted RBP12.94□□□□□ -0.34
VPS45-208ENST00000478999 HSPA1LP34931 641 aa12.93□□□□□ -0.34
VPS45-208ENST00000478999 POLR1AO95602 1720 aaPredicted RBP12.93□□□□□ -0.34
VPS45-208ENST00000478999 ZMYM3Q14202 1370 aa12.91□□□□□ -0.34
VPS45-208ENST00000478999 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
VPS45-208ENST00000478999 SAMD9LQ8IVG5 1584 aa12.9□□□□□ -0.35
VPS45-208ENST00000478999 PKD2Q13563 968 aa12.89□□□□□ -0.35
VPS45-208ENST00000478999 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
VPS45-208ENST00000478999 PIP4K2BP78356 416 aa12.88□□□□□ -0.35
VPS45-208ENST00000478999 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
VPS45-208ENST00000478999 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
VPS45-208ENST00000478999 PTPRKQ15262 1439 aa12.88□□□□□ -0.35
VPS45-208ENST00000478999 PLXNC1O60486 1568 aa12.87□□□□□ -0.35
VPS45-208ENST00000478999 NEURL4Q96JN8 1562 aa12.87□□□□□ -0.35
VPS45-208ENST00000478999 PPP6R1Q9UPN7 881 aa12.86□□□□□ -0.35
VPS45-208ENST00000478999 CPS1P31327 1500 aa12.86□□□□□ -0.35
VPS45-208ENST00000478999 FYCO1Q9BQS8 1478 aa12.85□□□□□ -0.35
VPS45-208ENST00000478999 SYCP2Q9BX26 1530 aa12.84□□□□□ -0.35
VPS45-208ENST00000478999 CASKIN1Q8WXD9 1431 aa12.84□□□□□ -0.35
VPS45-208ENST00000478999 INO80Q9ULG1 1556 aaPredicted RBP12.84□□□□□ -0.35
VPS45-208ENST00000478999 ATP7AQ04656 1500 aa12.83□□□□□ -0.35
VPS45-208ENST00000478999 TOM1O60784 492 aa12.82□□□□□ -0.36
VPS45-208ENST00000478999 A2ML1A8K2U0 1454 aa12.82□□□□□ -0.36
VPS45-208ENST00000478999 SHANK2Q9UPX8 1470 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms