RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 CDCA8Q53HL2 280 aa16.37■□□□□ 0.21
PCCB-214ENST00000478469 WDR62O43379 1518 aa16.37■□□□□ 0.21
PCCB-214ENST00000478469 HDGFP51858 240 aaKnown RBP16.36■□□□□ 0.21
PCCB-214ENST00000478469 HECW1Q76N89 1606 aa16.36■□□□□ 0.21
PCCB-214ENST00000478469 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
PCCB-214ENST00000478469 EPRSP07814 1512 aaKnown RBP16.34■□□□□ 0.21
PCCB-214ENST00000478469 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
PCCB-214ENST00000478469 EHBP1L1Q8N3D4 1523 aa16.33■□□□□ 0.2
PCCB-214ENST00000478469 C14orf37Q86TY3 774 aa16.33■□□□□ 0.2
PCCB-214ENST00000478469 PLB1Q6P1J6 1458 aa16.33■□□□□ 0.2
PCCB-214ENST00000478469 AFAP1Q8N556 730 aa16.32■□□□□ 0.2
PCCB-214ENST00000478469 POGKQ9P215 609 aa16.32■□□□□ 0.2
PCCB-214ENST00000478469 FAM9BQ8IZU0 186 aa16.31■□□□□ 0.2
PCCB-214ENST00000478469 DHX57Q6P158 1386 aaKnown RBP16.31■□□□□ 0.2
PCCB-214ENST00000478469 KIF15Q9NS87 1388 aa16.31■□□□□ 0.2
PCCB-214ENST00000478469 ARHGAP5Q13017 1502 aa16.31■□□□□ 0.2
PCCB-214ENST00000478469 CDK13Q14004 1512 aaKnown RBP16.3■□□□□ 0.2
PCCB-214ENST00000478469 MRS2Q9HD23 443 aa16.29■□□□□ 0.2
PCCB-214ENST00000478469 RRBP1Q9P2E9 1410 aaKnown RBP16.29■□□□□ 0.2
PCCB-214ENST00000478469 L3MBTL2Q969R5 705 aa16.29■□□□□ 0.2
PCCB-214ENST00000478469 MIA2Q96PC5 1412 aa16.29■□□□□ 0.2
PCCB-214ENST00000478469 SLC24A1O60721 1099 aa16.28■□□□□ 0.2
PCCB-214ENST00000478469 MIER1Q8N108 512 aa16.28■□□□□ 0.2
PCCB-214ENST00000478469 HNRNPUQ00839 825 aaKnown RBP eCLIP16.26■□□□□ 0.19
PCCB-214ENST00000478469 PCF11O94913 1555 aaKnown RBP16.26■□□□□ 0.19
PCCB-214ENST00000478469 EIF4G3O43432 1585 aaKnown RBP16.26■□□□□ 0.19
PCCB-214ENST00000478469 ANKRD50Q9ULJ7 1429 aa16.25■□□□□ 0.19
PCCB-214ENST00000478469 KNSTRNQ9Y448 316 aa16.24■□□□□ 0.19
PCCB-214ENST00000478469 TMF1P82094 1093 aa16.23■□□□□ 0.19
PCCB-214ENST00000478469 ADAMTS12P58397 1594 aa16.23■□□□□ 0.19
PCCB-214ENST00000478469 CCDC144AA2RUR9 1427 aa16.23■□□□□ 0.19
PCCB-214ENST00000478469 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
PCCB-214ENST00000478469 PLEKHH2Q8IVE3 1493 aa16.21■□□□□ 0.19
PCCB-214ENST00000478469 HSPA5P11021 654 aaKnown RBP16.21■□□□□ 0.19
PCCB-214ENST00000478469 SUPT6HQ7KZ85 1726 aaKnown RBP16.2■□□□□ 0.18
PCCB-214ENST00000478469 MAP3K1Q13233 1512 aa16.19■□□□□ 0.18
PCCB-214ENST00000478469 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
PCCB-214ENST00000478469 ROCK2O75116 1388 aaKnown RBP16.18■□□□□ 0.18
PCCB-214ENST00000478469 STK26Q9P289 416 aa16.18■□□□□ 0.18
PCCB-214ENST00000478469 SAFB2Q14151 953 aaKnown RBP eCLIP16.17■□□□□ 0.18
PCCB-214ENST00000478469 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
PCCB-214ENST00000478469 C9orf84Q5VXU9 1444 aa16.16■□□□□ 0.18
PCCB-214ENST00000478469 ARHGEF11O15085 1522 aa16.16■□□□□ 0.18
PCCB-214ENST00000478469 SCAPERQ9BY12 1400 aa16.16■□□□□ 0.18
PCCB-214ENST00000478469 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
PCCB-214ENST00000478469 CANXP27824 592 aaKnown RBP16.15■□□□□ 0.18
PCCB-214ENST00000478469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.15■□□□□ 0.18
PCCB-214ENST00000478469 RAPGEF3O95398 923 aa16.14■□□□□ 0.17
PCCB-214ENST00000478469 ABCA5Q8WWZ7 1642 aa16.14■□□□□ 0.17
PCCB-214ENST00000478469 SRPK2P78362 688 aaKnown RBP16.13■□□□□ 0.17
PCCB-214ENST00000478469 EID1Q9Y6B2 187 aa16.13■□□□□ 0.17
PCCB-214ENST00000478469 NUTM2DQ5VT03 806 aaPredicted RBP16.13■□□□□ 0.17
PCCB-214ENST00000478469 UGGT2Q9NYU1 1516 aa16.13■□□□□ 0.17
PCCB-214ENST00000478469 GTF3C3Q9Y5Q9 886 aa16.13■□□□□ 0.17
PCCB-214ENST00000478469 NUP160Q12769 1436 aa16.12■□□□□ 0.17
PCCB-214ENST00000478469 PLEKHG5O94827 1062 aa16.12■□□□□ 0.17
PCCB-214ENST00000478469 CD109Q6YHK3 1445 aa16.11■□□□□ 0.17
PCCB-214ENST00000478469 DAPK1P53355 1430 aa16.11■□□□□ 0.17
PCCB-214ENST00000478469 CTTNBP2Q8WZ74 1663 aa16.11■□□□□ 0.17
PCCB-214ENST00000478469 TARBP1Q13395 1621 aaKnown RBP16.1■□□□□ 0.17
PCCB-214ENST00000478469 CFAP53Q96M91 514 aa16.1■□□□□ 0.17
PCCB-214ENST00000478469 HFM1A2PYH4 1435 aa16.09■□□□□ 0.17
PCCB-214ENST00000478469 VGFO15240 615 aaPredicted RBP16.09■□□□□ 0.17
PCCB-214ENST00000478469 PBRM1Q86U86 1689 aa16.07■□□□□ 0.16
PCCB-214ENST00000478469 KIF14Q15058 1648 aa16.07■□□□□ 0.16
PCCB-214ENST00000478469 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
PCCB-214ENST00000478469 ATP10BO94823 1461 aa16.07■□□□□ 0.16
PCCB-214ENST00000478469 ZBTB7CA1YPR0 619 aa16.06■□□□□ 0.16
PCCB-214ENST00000478469 PPM1GO15355 546 aaPredicted RBP16.06■□□□□ 0.16
PCCB-214ENST00000478469 EIF3AQ14152 1382 aaKnown RBP16.06■□□□□ 0.16
PCCB-214ENST00000478469 CC2D1BQ5T0F9 858 aaKnown RBP16.06■□□□□ 0.16
PCCB-214ENST00000478469 RAPGEF6Q8TEU7 1601 aa16.05■□□□□ 0.16
PCCB-214ENST00000478469 NUP153P49790 1475 aaKnown RBP16.05■□□□□ 0.16
PCCB-214ENST00000478469 KIAA0556O60303 1618 aa16.05■□□□□ 0.16
PCCB-214ENST00000478469 LMOD2Q6P5Q4 547 aa16.04■□□□□ 0.16
PCCB-214ENST00000478469 CCDC141Q6ZP82 1450 aa16.04■□□□□ 0.16
PCCB-214ENST00000478469 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
PCCB-214ENST00000478469 TRAK1Q9UPV9 953 aa16.03■□□□□ 0.16
PCCB-214ENST00000478469 TNNT2P45379 298 aaPredicted RBP16.02■□□□□ 0.16
PCCB-214ENST00000478469 ROCK1Q13464 1354 aa16.02■□□□□ 0.16
PCCB-214ENST00000478469 CAMSAP2Q08AD1 1489 aa16.02■□□□□ 0.16
PCCB-214ENST00000478469 HAP1P54257 671 aaPredicted RBP16.02■□□□□ 0.15
PCCB-214ENST00000478469 STAC3Q96MF2 364 aa16.01■□□□□ 0.15
PCCB-214ENST00000478469 NAIPQ13075 1403 aa16.01■□□□□ 0.15
PCCB-214ENST00000478469 ST20-MTHFSA0A0A6YYL1 179 aa16.01■□□□□ 0.15
PCCB-214ENST00000478469 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
PCCB-214ENST00000478469 ABCC5O15440 1437 aa16■□□□□ 0.15
PCCB-214ENST00000478469 PTPN23Q9H3S7 1636 aa16■□□□□ 0.15
PCCB-214ENST00000478469 ADGRL1O94910 1474 aa16■□□□□ 0.15
PCCB-214ENST00000478469 DISP1Q96F81 1524 aa15.99■□□□□ 0.15
PCCB-214ENST00000478469 NUDCQ9Y266 331 aa15.98■□□□□ 0.15
PCCB-214ENST00000478469 HDGFL2Q7Z4V5 671 aaPredicted RBP15.98■□□□□ 0.15
PCCB-214ENST00000478469 GPATCH8Q9UKJ3 1502 aaKnown RBP15.97■□□□□ 0.15
PCCB-214ENST00000478469 DAXXQ9UER7 740 aaPredicted RBP15.97■□□□□ 0.15
PCCB-214ENST00000478469 ASXL2Q76L83 1435 aa15.97■□□□□ 0.15
PCCB-214ENST00000478469 FANCAO15360 1455 aa15.96■□□□□ 0.15
PCCB-214ENST00000478469 MORC1Q86VD1 984 aa15.96■□□□□ 0.14
PCCB-214ENST00000478469 KIAA1107Q9UPP5 1409 aa15.95■□□□□ 0.14
PCCB-214ENST00000478469 NCOA1Q15788 1441 aa15.94■□□□□ 0.14
PCCB-214ENST00000478469 USP47Q96K76 1375 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms