RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 ADGBQ8N7X0 1667 aa18.01■□□□□ 0.47
TRAF3IP3-213ENST00000478359 CDC42BPAQ5VT25 1732 aa17.99■□□□□ 0.47
TRAF3IP3-213ENST00000478359 RRP7BPQ9NSQ0 103 aa17.99■□□□□ 0.47
TRAF3IP3-213ENST00000478359 CHIC2Q9UKJ5 165 aa17.99■□□□□ 0.47
TRAF3IP3-213ENST00000478359 CROCC2H7BZ55 1655 aa17.99■□□□□ 0.47
TRAF3IP3-213ENST00000478359 ABCC2Q92887 1545 aa17.98■□□□□ 0.47
TRAF3IP3-213ENST00000478359 ADGRL2O95490 1459 aa17.97■□□□□ 0.47
TRAF3IP3-213ENST00000478359 SIN3AQ96ST3 1273 aa17.96■□□□□ 0.47
TRAF3IP3-213ENST00000478359 TONSLQ96HA7 1378 aa17.96■□□□□ 0.47
TRAF3IP3-213ENST00000478359 NEUROD1Q13562 356 aa17.95■□□□□ 0.46
TRAF3IP3-213ENST00000478359 SHANK2Q9UPX8 1470 aa17.95■□□□□ 0.46
TRAF3IP3-213ENST00000478359 ZNF644Q9H582 1327 aaPredicted RBP17.94■□□□□ 0.46
TRAF3IP3-213ENST00000478359 UHRF1BP1LA0JNW5 1464 aa17.93■□□□□ 0.46
TRAF3IP3-213ENST00000478359 PPP1R15AO75807 674 aaPredicted RBP17.92■□□□□ 0.46
TRAF3IP3-213ENST00000478359 NCOA1Q15788 1441 aa17.92■□□□□ 0.46
TRAF3IP3-213ENST00000478359 KDM6BO15054 1643 aa17.92■□□□□ 0.46
TRAF3IP3-213ENST00000478359 ANKRD30AQ9BXX3 1397 aa17.91■□□□□ 0.46
TRAF3IP3-213ENST00000478359 ARHGEF5Q12774 1597 aa17.91■□□□□ 0.46
TRAF3IP3-213ENST00000478359 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
TRAF3IP3-213ENST00000478359 PREX2Q70Z35 1606 aa17.91■□□□□ 0.46
TRAF3IP3-213ENST00000478359 RSPH4AQ5TD94 716 aa17.9■□□□□ 0.46
TRAF3IP3-213ENST00000478359 MPHOSPH9Q99550 1183 aa17.88■□□□□ 0.45
TRAF3IP3-213ENST00000478359 ZNF777Q9ULD5 760 aaPredicted RBP17.88■□□□□ 0.45
TRAF3IP3-213ENST00000478359 ERCC6L2Q5T890 1561 aa17.87■□□□□ 0.45
TRAF3IP3-213ENST00000478359 CDC42BPBQ9Y5S2 1711 aa17.85■□□□□ 0.45
TRAF3IP3-213ENST00000478359 DENND4BO75064 1496 aaPredicted RBP17.85■□□□□ 0.45
TRAF3IP3-213ENST00000478359 KDM5BQ9UGL1 1544 aa17.85■□□□□ 0.45
TRAF3IP3-213ENST00000478359 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
TRAF3IP3-213ENST00000478359 TSPY4P0CV99 314 aa17.84■□□□□ 0.45
TRAF3IP3-213ENST00000478359 TSPY10P0CW01 314 aa17.84■□□□□ 0.45
TRAF3IP3-213ENST00000478359 C9orf84Q5VXU9 1444 aa17.83■□□□□ 0.45
TRAF3IP3-213ENST00000478359 PLEKHH2Q8IVE3 1493 aa17.83■□□□□ 0.44
TRAF3IP3-213ENST00000478359 MYO5CQ9NQX4 1742 aa17.83■□□□□ 0.44
TRAF3IP3-213ENST00000478359 ZCCHC11Q5TAX3 1644 aaKnown RBP17.82■□□□□ 0.44
TRAF3IP3-213ENST00000478359 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRAF3IP3-213ENST00000478359 CCDC141Q6ZP82 1450 aa17.82■□□□□ 0.44
TRAF3IP3-213ENST00000478359 SAMD9LQ8IVG5 1584 aa17.81■□□□□ 0.44
TRAF3IP3-213ENST00000478359 MBD5Q9P267 1494 aa17.8■□□□□ 0.44
TRAF3IP3-213ENST00000478359 ANKRD50Q9ULJ7 1429 aa17.8■□□□□ 0.44
TRAF3IP3-213ENST00000478359 MIER1Q8N108 512 aa17.8■□□□□ 0.44
TRAF3IP3-213ENST00000478359 TTC37Q6PGP7 1564 aa17.79■□□□□ 0.44
TRAF3IP3-213ENST00000478359 SLC4A1APQ9BWU0 796 aaKnown RBP17.78■□□□□ 0.44
TRAF3IP3-213ENST00000478359 MAST1Q9Y2H9 1570 aa17.78■□□□□ 0.44
TRAF3IP3-213ENST00000478359 KIAA1107Q9UPP5 1409 aa17.78■□□□□ 0.44
TRAF3IP3-213ENST00000478359 ARHGAP5Q13017 1502 aa17.78■□□□□ 0.44
TRAF3IP3-213ENST00000478359 ANKRD30BQ9BXX2 1392 aa17.78■□□□□ 0.44
TRAF3IP3-213ENST00000478359 RPRD2Q5VT52 1461 aaKnown RBP17.78■□□□□ 0.44
TRAF3IP3-213ENST00000478359 KDM5DQ9BY66 1539 aa17.76■□□□□ 0.43
TRAF3IP3-213ENST00000478359 PZPP20742 1482 aa17.75■□□□□ 0.43
TRAF3IP3-213ENST00000478359 OSCARQ8IYS5 282 aa17.75■□□□□ 0.43
TRAF3IP3-213ENST00000478359 ARAP3Q8WWN8 1544 aa17.74■□□□□ 0.43
TRAF3IP3-213ENST00000478359 PLCH2O75038 1416 aa17.73■□□□□ 0.43
TRAF3IP3-213ENST00000478359 KIF15Q9NS87 1388 aa17.72■□□□□ 0.43
TRAF3IP3-213ENST00000478359 SYCP2Q9BX26 1530 aa17.72■□□□□ 0.43
TRAF3IP3-213ENST00000478359 HNRNPMP52272 730 aaKnown RBP eCLIP17.71■□□□□ 0.43
TRAF3IP3-213ENST00000478359 PLXNC1O60486 1568 aa17.71■□□□□ 0.43
TRAF3IP3-213ENST00000478359 EFCAB2Q5VUJ9 269 aa17.68■□□□□ 0.42
TRAF3IP3-213ENST00000478359 TEX14Q8IWB6 1497 aa17.66■□□□□ 0.42
TRAF3IP3-213ENST00000478359 NUP155O75694 1391 aa17.66■□□□□ 0.42
TRAF3IP3-213ENST00000478359 WDR7Q9Y4E6 1490 aa17.66■□□□□ 0.42
TRAF3IP3-213ENST00000478359 KCNH8Q96L42 1107 aa17.65■□□□□ 0.42
TRAF3IP3-213ENST00000478359 ABCC1P33527 1531 aa17.64■□□□□ 0.41
TRAF3IP3-213ENST00000478359 L3MBTL2Q969R5 705 aa17.64■□□□□ 0.41
TRAF3IP3-213ENST00000478359 FOXD1Q16676 465 aa17.63■□□□□ 0.41
TRAF3IP3-213ENST00000478359 UNC13BO14795 1591 aa17.63■□□□□ 0.41
TRAF3IP3-213ENST00000478359 PKD2Q13563 968 aa17.63■□□□□ 0.41
TRAF3IP3-213ENST00000478359 DUOX2Q9NRD8 1548 aa17.62■□□□□ 0.41
TRAF3IP3-213ENST00000478359 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
TRAF3IP3-213ENST00000478359 ERBINQ96RT1 1412 aa17.61■□□□□ 0.41
TRAF3IP3-213ENST00000478359 EIF4G2P78344 907 aaKnown RBP eCLIP17.6■□□□□ 0.41
TRAF3IP3-213ENST00000478359 RTEL1-TNFRSF6BF6WH68 1400 aa17.59■□□□□ 0.41
TRAF3IP3-213ENST00000478359 FAM135AQ9P2D6 1515 aa17.58■□□□□ 0.41
TRAF3IP3-213ENST00000478359 ARHGEF12Q9NZN5 1544 aa17.57■□□□□ 0.4
TRAF3IP3-213ENST00000478359 DDX10Q13206 875 aaKnown RBP17.57■□□□□ 0.4
TRAF3IP3-213ENST00000478359 IQGAP3Q86VI3 1631 aa17.55■□□□□ 0.4
TRAF3IP3-213ENST00000478359 MAGI2Q86UL8 1455 aa17.55■□□□□ 0.4
TRAF3IP3-213ENST00000478359 NPM1P06748 294 aaKnown RBP eCLIP17.54■□□□□ 0.4
TRAF3IP3-213ENST00000478359 YTHDC1Q96MU7 727 aaKnown RBP17.54■□□□□ 0.4
TRAF3IP3-213ENST00000478359 ASXL2Q76L83 1435 aa17.53■□□□□ 0.4
TRAF3IP3-213ENST00000478359 FANCAO15360 1455 aa17.52■□□□□ 0.4
TRAF3IP3-213ENST00000478359 HSPA5P11021 654 aaKnown RBP17.52■□□□□ 0.39
TRAF3IP3-213ENST00000478359 UHRF1BP1Q6BDS2 1440 aa17.51■□□□□ 0.39
TRAF3IP3-213ENST00000478359 ANP32CO43423 234 aa17.5■□□□□ 0.39
TRAF3IP3-213ENST00000478359 TRAPPC8Q9Y2L5 1435 aa17.5■□□□□ 0.39
TRAF3IP3-213ENST00000478359 HIRIP3Q9BW71 556 aaPredicted RBP17.5■□□□□ 0.39
TRAF3IP3-213ENST00000478359 SPAG9O60271 1321 aaKnown RBP17.49■□□□□ 0.39
TRAF3IP3-213ENST00000478359 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
TRAF3IP3-213ENST00000478359 CCER2I3L3R5 266 aa17.49■□□□□ 0.39
TRAF3IP3-213ENST00000478359 CFAP74Q9C0B2 1584 aa17.49■□□□□ 0.39
TRAF3IP3-213ENST00000478359 ZFYVE16Q7Z3T8 1539 aa17.49■□□□□ 0.39
TRAF3IP3-213ENST00000478359 POLR1AO95602 1720 aaPredicted RBP17.49■□□□□ 0.39
TRAF3IP3-213ENST00000478359 NBPF8Q3BBV2 869 aa17.48■□□□□ 0.39
TRAF3IP3-213ENST00000478359 ATP10AO60312 1499 aa17.48■□□□□ 0.39
TRAF3IP3-213ENST00000478359 CCDC144AA2RUR9 1427 aa17.47■□□□□ 0.39
TRAF3IP3-213ENST00000478359 INO80Q9ULG1 1556 aaPredicted RBP17.47■□□□□ 0.39
TRAF3IP3-213ENST00000478359 SPATA31E1Q6ZUB1 1445 aa17.46■□□□□ 0.39
TRAF3IP3-213ENST00000478359 ADGRL1O94910 1474 aa17.46■□□□□ 0.39
TRAF3IP3-213ENST00000478359 ATP7AQ04656 1500 aa17.45■□□□□ 0.38
TRAF3IP3-213ENST00000478359 RALGAPBQ86X10 1494 aa17.44■□□□□ 0.38
TRAF3IP3-213ENST00000478359 RIMBP3CA6NJZ7 1639 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms