RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 UACAQ9BZF9 1416 aa14.97□□□□□ -0.01
GFM1-207ENST00000478254 SMG6Q86US8 1419 aaKnown RBP14.96□□□□□ -0.02
GFM1-207ENST00000478254 CARD11Q9BXL7 1154 aa14.96□□□□□ -0.02
GFM1-207ENST00000478254 IGF1RP08069 1367 aa14.95□□□□□ -0.02
GFM1-207ENST00000478254 PTPRKQ15262 1439 aa14.95□□□□□ -0.02
GFM1-207ENST00000478254 FMN1Q68DA7 1419 aa14.94□□□□□ -0.02
GFM1-207ENST00000478254 PNISRQ8TF01 805 aaKnown RBP14.94□□□□□ -0.02
GFM1-207ENST00000478254 PKNOX2Q96KN3 472 aa14.93□□□□□ -0.02
GFM1-207ENST00000478254 ERICH3Q5RHP9 1530 aa14.93□□□□□ -0.02
GFM1-207ENST00000478254 ATAD2BQ9ULI0 1458 aa14.93□□□□□ -0.02
GFM1-207ENST00000478254 FGD6Q6ZV73 1430 aa14.93□□□□□ -0.02
GFM1-207ENST00000478254 C20orf194Q5TEA3 1177 aa14.93□□□□□ -0.02
GFM1-207ENST00000478254 GLIPR1L2Q4G1C9 344 aa14.91□□□□□ -0.02
GFM1-207ENST00000478254 DCAF11Q8TEB1 546 aa14.91□□□□□ -0.02
GFM1-207ENST00000478254 POGKQ9P215 609 aa14.9□□□□□ -0.02
GFM1-207ENST00000478254 RGL3Q3MIN7 710 aa14.9□□□□□ -0.02
GFM1-207ENST00000478254 WASHC2CQ9Y4E1 1318 aa14.9□□□□□ -0.02
GFM1-207ENST00000478254 RSPH6AQ9H0K4 717 aa14.89□□□□□ -0.03
GFM1-207ENST00000478254 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
GFM1-207ENST00000478254 CANXP27824 592 aaKnown RBP14.88□□□□□ -0.03
GFM1-207ENST00000478254 ST20-MTHFSA0A0A6YYL1 179 aa14.87□□□□□ -0.03
GFM1-207ENST00000478254 NAIPQ13075 1403 aa14.87□□□□□ -0.03
GFM1-207ENST00000478254 MS4A1P11836 297 aa14.86□□□□□ -0.03
GFM1-207ENST00000478254 ARID3AQ99856 593 aa14.86□□□□□ -0.03
GFM1-207ENST00000478254 CUX1P39880 1505 aa14.84□□□□□ -0.03
GFM1-207ENST00000478254 USP47Q96K76 1375 aa14.83□□□□□ -0.03
GFM1-207ENST00000478254 NCOA1Q15788 1441 aa14.83□□□□□ -0.04
GFM1-207ENST00000478254 PNNQ9H307 717 aaKnown RBP14.83□□□□□ -0.04
GFM1-207ENST00000478254 HFM1A2PYH4 1435 aa14.83□□□□□ -0.04
GFM1-207ENST00000478254 ZNF644Q9H582 1327 aaPredicted RBP14.83□□□□□ -0.04
GFM1-207ENST00000478254 PKD2Q13563 968 aa14.82□□□□□ -0.04
GFM1-207ENST00000478254 FAM161AQ3B820 660 aa14.82□□□□□ -0.04
GFM1-207ENST00000478254 HSP90AA2PQ14568 343 aaPredicted RBP14.8□□□□□ -0.04
GFM1-207ENST00000478254 PCF11O94913 1555 aaKnown RBP14.79□□□□□ -0.04
GFM1-207ENST00000478254 RRAGDQ9NQL2 400 aaPredicted RBP14.79□□□□□ -0.04
GFM1-207ENST00000478254 CFTRP13569 1480 aa14.79□□□□□ -0.04
GFM1-207ENST00000478254 FAM43AQ8N2R8 423 aa14.79□□□□□ -0.04
GFM1-207ENST00000478254 HSP90AA1P07900 732 aaKnown RBP14.78□□□□□ -0.04
GFM1-207ENST00000478254 MYBBP1AQ9BQG0 1328 aaKnown RBP14.78□□□□□ -0.04
GFM1-207ENST00000478254 WDR43Q15061 677 aaKnown RBP eCLIP14.78□□□□□ -0.04
GFM1-207ENST00000478254 NEUROD2Q15784 382 aa14.78□□□□□ -0.04
GFM1-207ENST00000478254 CCDC146Q8IYE0 955 aa14.78□□□□□ -0.04
GFM1-207ENST00000478254 ZMYND15Q9H091 742 aa14.78□□□□□ -0.04
GFM1-207ENST00000478254 RNF123Q5XPI4 1314 aa14.77□□□□□ -0.04
GFM1-207ENST00000478254 BECN1Q14457 450 aa14.75□□□□□ -0.05
GFM1-207ENST00000478254 NLRP13Q86W25 1043 aa14.75□□□□□ -0.05
GFM1-207ENST00000478254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.055e-6■□□□□ 8.1
GFM1-207ENST00000478254 NCOA2Q15596 1464 aa14.74□□□□□ -0.05
GFM1-207ENST00000478254 ZBTB7CA1YPR0 619 aa14.73□□□□□ -0.05
GFM1-207ENST00000478254 PANK2Q9BZ23 570 aa14.73□□□□□ -0.05
GFM1-207ENST00000478254 UPF2Q9HAU5 1272 aaKnown RBP14.72□□□□□ -0.05
GFM1-207ENST00000478254 MAP3K1Q13233 1512 aa14.72□□□□□ -0.05
GFM1-207ENST00000478254 RALBP1Q15311 655 aa14.72□□□□□ -0.05
GFM1-207ENST00000478254 MYOM3Q5VTT5 1437 aa14.72□□□□□ -0.05
GFM1-207ENST00000478254 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.72□□□□□ -0.05
GFM1-207ENST00000478254 PTPN23Q9H3S7 1636 aa14.72□□□□□ -0.05
GFM1-207ENST00000478254 GOLGA6L3A6NEY3 463 aa14.72□□□□□ -0.05
GFM1-207ENST00000478254 KIF15Q9NS87 1388 aa14.71□□□□□ -0.05
GFM1-207ENST00000478254 CENPQQ7L2Z9 268 aaPredicted RBP14.71□□□□□ -0.05
GFM1-207ENST00000478254 DHX29Q7Z478 1369 aaKnown RBP14.71□□□□□ -0.05
GFM1-207ENST00000478254 KTN1Q86UP2 1357 aaKnown RBP14.7□□□□□ -0.06
GFM1-207ENST00000478254 L1TD1Q5T7N2 865 aaKnown RBP14.7□□□□□ -0.06
GFM1-207ENST00000478254 TRIM44Q96DX7 344 aaPredicted RBP14.69□□□□□ -0.06
GFM1-207ENST00000478254 ADAMTS8Q9UP79 889 aa14.69□□□□□ -0.06
GFM1-207ENST00000478254 C8orf34Q49A92 452 aa14.69□□□□□ -0.06
GFM1-207ENST00000478254 SEC24BO95487 1268 aa14.69□□□□□ -0.06
GFM1-207ENST00000478254 CASKIN1Q8WXD9 1431 aa14.68□□□□□ -0.06
GFM1-207ENST00000478254 BCAR3O75815 825 aa14.68□□□□□ -0.06
GFM1-207ENST00000478254 PDE3BQ13370 1112 aa14.68□□□□□ -0.06
GFM1-207ENST00000478254 CLUAP1Q96AJ1 413 aa14.68□□□□□ -0.06
GFM1-207ENST00000478254 PANK3Q9H999 370 aa14.68□□□□□ -0.06
GFM1-207ENST00000478254 FOXD4L1Q9NU39 408 aa14.68□□□□□ -0.06
GFM1-207ENST00000478254 TDRD9Q8NDG6 1382 aaKnown RBP14.67□□□□□ -0.06
GFM1-207ENST00000478254 COG6Q9Y2V7 657 aa14.67□□□□□ -0.06
GFM1-207ENST00000478254 BCL2L13Q9BXK5 485 aa14.67□□□□□ -0.06
GFM1-207ENST00000478254 RAD54L2Q9Y4B4 1467 aa14.67□□□□□ -0.06
GFM1-207ENST00000478254 TNNT2P45379 298 aaPredicted RBP14.65□□□□□ -0.06
GFM1-207ENST00000478254 CFDP1Q9UEE9 299 aaPredicted RBP14.65□□□□□ -0.06
GFM1-207ENST00000478254 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
GFM1-207ENST00000478254 ANKRD30BQ9BXX2 1392 aa14.64□□□□□ -0.07
GFM1-207ENST00000478254 PANK1Q8TE04 598 aa14.64□□□□□ -0.07
GFM1-207ENST00000478254 ROCK2O75116 1388 aaKnown RBP14.63□□□□□ -0.07
GFM1-207ENST00000478254 MFAP1P55081 439 aaKnown RBP14.63□□□□□ -0.07
GFM1-207ENST00000478254 GOLGA2Q08379 1002 aa14.62□□□□□ -0.07
GFM1-207ENST00000478254 NBPF1Q3BBV0 1214 aa14.62□□□□□ -0.07
GFM1-207ENST00000478254 BRD4O60885 1362 aaPredicted RBP14.62□□□□□ -0.07
GFM1-207ENST00000478254 PEG3Q9GZU2 1588 aa14.62□□□□□ -0.07
GFM1-207ENST00000478254 UNC13AQ9UPW8 1703 aa14.62□□□□□ -0.07
GFM1-207ENST00000478254 FYCO1Q9BQS8 1478 aa14.62□□□□□ -0.07
GFM1-207ENST00000478254 KDM5BQ9UGL1 1544 aa14.61□□□□□ -0.07
GFM1-207ENST00000478254 XRCC6P12956 609 aaKnown RBP eCLIP14.61□□□□□ -0.07
GFM1-207ENST00000478254 MYH16Q9H6N6 1097 aa14.61□□□□□ -0.07
GFM1-207ENST00000478254 KNSTRNQ9Y448 316 aa14.61□□□□□ -0.07
GFM1-207ENST00000478254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.61□□□□□ -0.07
GFM1-207ENST00000478254 A0A0U1RQG5 324 aaPredicted RBP14.6□□□□□ -0.07
GFM1-207ENST00000478254 IGHDP01880 384 aa14.6□□□□□ -0.07
GFM1-207ENST00000478254 RBM10P98175 930 aaKnown RBP14.6□□□□□ -0.07
GFM1-207ENST00000478254 APAF1O14727 1248 aa14.6□□□□□ -0.07
GFM1-207ENST00000478254 BIVM-ERCC5R4GMW8 1640 aa14.6□□□□□ -0.07
GFM1-207ENST00000478254 RRP7AQ9Y3A4 280 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms