RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ANKRD30AQ9BXX3 1397 aa14.68□□□□□ -0.06
COL27A1-204ENST00000477421 RBM19Q9Y4C8 960 aaKnown RBP14.68□□□□□ -0.06
COL27A1-204ENST00000477421 NCOA2Q15596 1464 aa14.67□□□□□ -0.06
COL27A1-204ENST00000477421 ST20-MTHFSA0A0A6YYL1 179 aa14.67□□□□□ -0.06
COL27A1-204ENST00000477421 PEG3Q9GZU2 1588 aa14.67□□□□□ -0.06
COL27A1-204ENST00000477421 AEBP2Q6ZN18 517 aaPredicted RBP14.66□□□□□ -0.06
COL27A1-204ENST00000477421 PRKRIP1Q9H875 184 aaPredicted RBP14.65□□□□□ -0.06
COL27A1-204ENST00000477421 TULP1O00294 542 aaPredicted RBP14.63□□□□□ -0.07
COL27A1-204ENST00000477421 UACAQ9BZF9 1416 aa14.63□□□□□ -0.07
COL27A1-204ENST00000477421 ESF1Q9H501 851 aaKnown RBP14.63□□□□□ -0.07
COL27A1-204ENST00000477421 ROCK2O75116 1388 aaKnown RBP14.62□□□□□ -0.07
COL27A1-204ENST00000477421 NEFMP07197 916 aa14.62□□□□□ -0.07
COL27A1-204ENST00000477421 GGT6Q6P531 493 aa14.62□□□□□ -0.07
COL27A1-204ENST00000477421 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
COL27A1-204ENST00000477421 WASHC2AQ641Q2 1341 aa14.62□□□□□ -0.07
COL27A1-204ENST00000477421 SAFB2Q14151 953 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL27A1-204ENST00000477421 TIAM1Q13009 1591 aa14.61□□□□□ -0.07
COL27A1-204ENST00000477421 TMF1P82094 1093 aa14.6□□□□□ -0.07
COL27A1-204ENST00000477421 ANP32EQ9BTT0 268 aa14.6□□□□□ -0.07
COL27A1-204ENST00000477421 EFCAB2Q5VUJ9 269 aa14.58□□□□□ -0.08
COL27A1-204ENST00000477421 FYCO1Q9BQS8 1478 aa14.58□□□□□ -0.08
COL27A1-204ENST00000477421 NBPF8Q3BBV2 869 aa14.58□□□□□ -0.08
COL27A1-204ENST00000477421 KIF3BO15066 747 aa14.57□□□□□ -0.08
COL27A1-204ENST00000477421 WDR97A6NE52 1622 aa14.57□□□□□ -0.08
COL27A1-204ENST00000477421 PPM1GO15355 546 aaPredicted RBP14.57□□□□□ -0.08
COL27A1-204ENST00000477421 CCDC184Q52MB2 194 aa14.56□□□□□ -0.08
COL27A1-204ENST00000477421 PTPRGP23470 1445 aa14.56□□□□□ -0.08
COL27A1-204ENST00000477421 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.55□□□□□ -0.08
COL27A1-204ENST00000477421 KIF7Q2M1P5 1343 aa14.55□□□□□ -0.08
COL27A1-204ENST00000477421 NUTM2DQ5VT03 806 aaPredicted RBP14.54□□□□□ -0.08
COL27A1-204ENST00000477421 USP47Q96K76 1375 aa14.54□□□□□ -0.08
COL27A1-204ENST00000477421 CDCA8Q53HL2 280 aa14.54□□□□□ -0.08
COL27A1-204ENST00000477421 RGS3P49796 1198 aa14.53□□□□□ -0.08
COL27A1-204ENST00000477421 PLEKHG5O94827 1062 aa14.52□□□□□ -0.08
COL27A1-204ENST00000477421 PRG4Q92954 1404 aaPredicted RBP14.52□□□□□ -0.09
COL27A1-204ENST00000477421 FRAT1Q92837 279 aaPredicted RBP14.51□□□□□ -0.09
COL27A1-204ENST00000477421 PCF11O94913 1555 aaKnown RBP14.51□□□□□ -0.09
COL27A1-204ENST00000477421 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
COL27A1-204ENST00000477421 HFM1A2PYH4 1435 aa14.5□□□□□ -0.09
COL27A1-204ENST00000477421 NAIPQ13075 1403 aa14.5□□□□□ -0.09
COL27A1-204ENST00000477421 STK26Q9P289 416 aa14.5□□□□□ -0.09
COL27A1-204ENST00000477421 GRIN2BQ13224 1484 aa14.5□□□□□ -0.09
COL27A1-204ENST00000477421 DNMBPQ6XZF7 1577 aa14.5□□□□□ -0.09
COL27A1-204ENST00000477421 KTN1Q86UP2 1357 aaKnown RBP14.5□□□□□ -0.09
COL27A1-204ENST00000477421 CCDC7Q96M83 1385 aa14.5□□□□□ -0.09
COL27A1-204ENST00000477421 MLECQ14165 292 aa14.49□□□□□ -0.09
COL27A1-204ENST00000477421 SPAG9O60271 1321 aaKnown RBP14.49□□□□□ -0.09
COL27A1-204ENST00000477421 CDK13Q14004 1512 aaKnown RBP14.49□□□□□ -0.09
COL27A1-204ENST00000477421 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
COL27A1-204ENST00000477421 PANK3Q9H999 370 aa14.49□□□□□ -0.09
COL27A1-204ENST00000477421 C11orf95C9JLR9 678 aaPredicted RBP14.48□□□□□ -0.09
COL27A1-204ENST00000477421 RCAN3Q9UKA8 241 aa14.48□□□□□ -0.09
COL27A1-204ENST00000477421 NUDCQ9Y266 331 aa14.47□□□□□ -0.09
COL27A1-204ENST00000477421 BIVM-ERCC5R4GMW8 1640 aa14.47□□□□□ -0.09
COL27A1-204ENST00000477421 KIF15Q9NS87 1388 aa14.46□□□□□ -0.09
COL27A1-204ENST00000477421 CCDC146Q8IYE0 955 aa14.46□□□□□ -0.09
COL27A1-204ENST00000477421 ANKRD50Q9ULJ7 1429 aa14.46□□□□□ -0.09
COL27A1-204ENST00000477421 U2SURPO15042 1029 aaKnown RBP14.46□□□□□ -0.1
COL27A1-204ENST00000477421 RALBP1Q15311 655 aa14.46□□□□□ -0.1
COL27A1-204ENST00000477421 NLRP13Q86W25 1043 aa14.46□□□□□ -0.1
COL27A1-204ENST00000477421 LAS1LQ9Y4W2 734 aaKnown RBP14.46□□□□□ -0.1
COL27A1-204ENST00000477421 CCDC144AA2RUR9 1427 aa14.46□□□□□ -0.1
COL27A1-204ENST00000477421 EFCAB5A4FU69 1503 aa14.45□□□□□ -0.1
COL27A1-204ENST00000477421 URB2Q14146 1524 aaKnown RBP14.45□□□□□ -0.1
COL27A1-204ENST00000477421 PLIN1O60240 522 aa14.45□□□□□ -0.1
COL27A1-204ENST00000477421 POGKQ9P215 609 aa14.45□□□□□ -0.1
COL27A1-204ENST00000477421 EIF5BO60841 1220 aaKnown RBP14.44□□□□□ -0.1
COL27A1-204ENST00000477421 RSPH4AQ5TD94 716 aa14.44□□□□□ -0.1
COL27A1-204ENST00000477421 NBPF1Q3BBV0 1214 aa14.44□□□□□ -0.1
COL27A1-204ENST00000477421 AFAP1Q8N556 730 aa14.43□□□□□ -0.1
COL27A1-204ENST00000477421 KANK1Q14678 1352 aa14.43□□□□□ -0.1
COL27A1-204ENST00000477421 TAOK2Q9UL54 1235 aa14.43□□□□□ -0.1
COL27A1-204ENST00000477421 PTPRKQ15262 1439 aa14.42□□□□□ -0.1
COL27A1-204ENST00000477421 KLHL34Q8N239 644 aa14.42□□□□□ -0.1
COL27A1-204ENST00000477421 CFAP53Q96M91 514 aa14.42□□□□□ -0.1
COL27A1-204ENST00000477421 TRAK1Q9UPV9 953 aa14.42□□□□□ -0.1
COL27A1-204ENST00000477421 SRPK2P78362 688 aaKnown RBP14.41□□□□□ -0.1
COL27A1-204ENST00000477421 MORC1Q86VD1 984 aa14.41□□□□□ -0.1
COL27A1-204ENST00000477421 ZBED9Q6R2W3 1325 aa14.41□□□□□ -0.1
COL27A1-204ENST00000477421 ARID4BQ4LE39 1312 aaPredicted RBP14.4□□□□□ -0.1
COL27A1-204ENST00000477421 SNAPC4Q5SXM2 1469 aa14.4□□□□□ -0.1
COL27A1-204ENST00000477421 EPRSP07814 1512 aaKnown RBP14.4□□□□□ -0.1
COL27A1-204ENST00000477421 UPF2Q9HAU5 1272 aaKnown RBP14.4□□□□□ -0.1
COL27A1-204ENST00000477421 NOP58Q9Y2X3 529 aaKnown RBP14.39□□□□□ -0.11
COL27A1-204ENST00000477421 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
COL27A1-204ENST00000477421 MYBBP1AQ9BQG0 1328 aaKnown RBP14.38□□□□□ -0.11
COL27A1-204ENST00000477421 CNTLNQ9NXG0 1405 aa14.38□□□□□ -0.11
COL27A1-204ENST00000477421 ZNF608Q9ULD9 1512 aaPredicted RBP14.38□□□□□ -0.11
COL27A1-204ENST00000477421 SOX12O15370 315 aa14.37□□□□□ -0.11
COL27A1-204ENST00000477421 EXOC6Q8TAG9 804 aa14.37□□□□□ -0.11
COL27A1-204ENST00000477421 EHBP1L1Q8N3D4 1523 aa14.36□□□□□ -0.11
COL27A1-204ENST00000477421 PLB1Q6P1J6 1458 aa14.36□□□□□ -0.11
COL27A1-204ENST00000477421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL27A1-204ENST00000477421 HSP90AA1P07900 732 aaKnown RBP14.35□□□□□ -0.11
COL27A1-204ENST00000477421 RRP7AQ9Y3A4 280 aaKnown RBP14.35□□□□□ -0.11
COL27A1-204ENST00000477421 MAPKBP1O60336 1514 aa14.35□□□□□ -0.11
COL27A1-204ENST00000477421 DAPK1P53355 1430 aa14.35□□□□□ -0.11
COL27A1-204ENST00000477421 FTSJ3Q8IY81 847 aaKnown RBP14.34□□□□□ -0.11
COL27A1-204ENST00000477421 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
COL27A1-204ENST00000477421 MIA2Q96PC5 1412 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms