RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
PRPF3-205ENST00000476970 SIGLEC1Q9BZZ2 1709 aa12.78□□□□□ -0.36
PRPF3-205ENST00000476970 STRCQ7RTU9 1775 aa12.78□□□□□ -0.36
PRPF3-205ENST00000476970 SETD1BQ9UPS6 1966 aaKnown RBP12.78□□□□□ -0.36
PRPF3-205ENST00000476970 IQSEC2Q5JU85 1478 aa12.76□□□□□ -0.37
PRPF3-205ENST00000476970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
PRPF3-205ENST00000476970 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
PRPF3-205ENST00000476970 ARHGEF12Q9NZN5 1544 aa12.75□□□□□ -0.37
PRPF3-205ENST00000476970 SAMD9Q5K651 1589 aa12.74□□□□□ -0.37
PRPF3-205ENST00000476970 UHRF1BP1Q6BDS2 1440 aa12.74□□□□□ -0.37
PRPF3-205ENST00000476970 HECW1Q76N89 1606 aa12.73□□□□□ -0.37
PRPF3-205ENST00000476970 MLECQ14165 292 aa12.72□□□□□ -0.37
PRPF3-205ENST00000476970 PTPRTO14522 1441 aa12.71□□□□□ -0.37
PRPF3-205ENST00000476970 PRXQ9BXM0 1461 aa12.71□□□□□ -0.38
PRPF3-205ENST00000476970 C9orf84Q5VXU9 1444 aa12.71□□□□□ -0.38
PRPF3-205ENST00000476970 NUP153P49790 1475 aaKnown RBP12.7□□□□□ -0.38
PRPF3-205ENST00000476970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.69□□□□□ -0.38
PRPF3-205ENST00000476970 ATP10AO60312 1499 aa12.68□□□□□ -0.38
PRPF3-205ENST00000476970 P3H3Q8IVL6 736 aa12.68□□□□□ -0.38
PRPF3-205ENST00000476970 LTBP4Q8N2S1 1624 aa12.67□□□□□ -0.38
PRPF3-205ENST00000476970 PLEKHD1A6NEE1 506 aa12.67□□□□□ -0.38
PRPF3-205ENST00000476970 SCAPERQ9BY12 1400 aa12.63□□□□□ -0.39
PRPF3-205ENST00000476970 C3P01024 1663 aa12.63□□□□□ -0.39
PRPF3-205ENST00000476970 MYO5CQ9NQX4 1742 aa12.62□□□□□ -0.39
PRPF3-205ENST00000476970 CEBPAP49715 358 aaPredicted RBP12.62□□□□□ -0.39
PRPF3-205ENST00000476970 REREQ9P2R6 1566 aa12.6□□□□□ -0.39
PRPF3-205ENST00000476970 ZNF518AQ6AHZ1 1483 aa12.6□□□□□ -0.39
PRPF3-205ENST00000476970 NCOA1Q15788 1441 aa12.6□□□□□ -0.39
PRPF3-205ENST00000476970 PLCH2O75038 1416 aa12.59□□□□□ -0.39
PRPF3-205ENST00000476970 KDM5CP41229 1560 aa12.58□□□□□ -0.4
PRPF3-205ENST00000476970 TRAPPC8Q9Y2L5 1435 aa12.57□□□□□ -0.4
PRPF3-205ENST00000476970 ESF1Q9H501 851 aaKnown RBP12.57□□□□□ -0.4
PRPF3-205ENST00000476970 MED1Q15648 1581 aaPredicted RBP12.56□□□□□ -0.4
PRPF3-205ENST00000476970 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
PRPF3-205ENST00000476970 UBAP1LF5GYI3 381 aa12.56□□□□□ -0.4
PRPF3-205ENST00000476970 AGLP35573 1532 aa12.55□□□□□ -0.4
PRPF3-205ENST00000476970 CAMSAP1Q5T5Y3 1602 aa12.55□□□□□ -0.4
PRPF3-205ENST00000476970 CNTLNQ9NXG0 1405 aa12.54□□□□□ -0.4
PRPF3-205ENST00000476970 SUPT6HQ7KZ85 1726 aaKnown RBP12.54□□□□□ -0.4
PRPF3-205ENST00000476970 EFCAB2Q5VUJ9 269 aa12.54□□□□□ -0.4
PRPF3-205ENST00000476970 ABCA6Q8N139 1617 aa12.53□□□□□ -0.4
PRPF3-205ENST00000476970 MROH2AA6NES4 1674 aa12.53□□□□□ -0.4
PRPF3-205ENST00000476970 CDK13Q14004 1512 aaKnown RBP12.52□□□□□ -0.4
PRPF3-205ENST00000476970 KIF14Q15058 1648 aa12.51□□□□□ -0.41
PRPF3-205ENST00000476970 ZNF142P52746 1687 aaPredicted RBP12.51□□□□□ -0.41
PRPF3-205ENST00000476970 MYT1LQ9UL68 1186 aa12.51□□□□□ -0.41
PRPF3-205ENST00000476970 NPATQ14207 1427 aa12.51□□□□□ -0.41
PRPF3-205ENST00000476970 ARHGAP5Q13017 1502 aa12.51□□□□□ -0.41
PRPF3-205ENST00000476970 PLA2R1Q13018 1463 aa12.49□□□□□ -0.41
PRPF3-205ENST00000476970 MLH3Q9UHC1 1453 aa12.49□□□□□ -0.41
PRPF3-205ENST00000476970 ZNF335Q9H4Z2 1342 aaPredicted RBP12.48□□□□□ -0.41
PRPF3-205ENST00000476970 MYO3AQ8NEV4 1616 aa12.48□□□□□ -0.41
PRPF3-205ENST00000476970 RANGAP1P46060 587 aaPredicted RBP12.46□□□□□ -0.41
PRPF3-205ENST00000476970 PKD2Q13563 968 aa12.46□□□□□ -0.41
PRPF3-205ENST00000476970 CDK11AQ9UQ88 783 aaPredicted RBP12.46□□□□□ -0.41
PRPF3-205ENST00000476970 ITSN2Q9NZM3 1697 aa12.45□□□□□ -0.42
PRPF3-205ENST00000476970 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
PRPF3-205ENST00000476970 CLIP1P30622 1438 aa12.45□□□□□ -0.42
PRPF3-205ENST00000476970 CEP170BQ9Y4F5 1589 aaPredicted RBP12.44□□□□□ -0.42
PRPF3-205ENST00000476970 SCAF1Q9H7N4 1312 aaKnown RBP12.44□□□□□ -0.42
PRPF3-205ENST00000476970 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
PRPF3-205ENST00000476970 CDC42BPBQ9Y5S2 1711 aa12.44□□□□□ -0.42
PRPF3-205ENST00000476970 TCOF1Q13428 1488 aaKnown RBP12.44□□□□□ -0.42
PRPF3-205ENST00000476970 ABCC1P33527 1531 aa12.43□□□□□ -0.42
PRPF3-205ENST00000476970 PREX2Q70Z35 1606 aa12.43□□□□□ -0.42
PRPF3-205ENST00000476970 KIDINS220Q9ULH0 1771 aa12.43□□□□□ -0.42
PRPF3-205ENST00000476970 CPS1P31327 1500 aa12.42□□□□□ -0.42
PRPF3-205ENST00000476970 NCKAP5LQ9HCH0 1330 aa12.42□□□□□ -0.42
PRPF3-205ENST00000476970 TOM1O60784 492 aa12.42□□□□□ -0.42
PRPF3-205ENST00000476970 HSPA1LP34931 641 aa12.42□□□□□ -0.42
PRPF3-205ENST00000476970 POLR1AO95602 1720 aaPredicted RBP12.42□□□□□ -0.42
PRPF3-205ENST00000476970 TROQ12816 1431 aaPredicted RBP12.41□□□□□ -0.42
PRPF3-205ENST00000476970 EEA1Q15075 1411 aa12.41□□□□□ -0.42
PRPF3-205ENST00000476970 FMN1Q68DA7 1419 aa12.41□□□□□ -0.42
PRPF3-205ENST00000476970 CLTCQ00610 1675 aaKnown RBP12.41□□□□□ -0.42
PRPF3-205ENST00000476970 PIP4K2BP78356 416 aa12.39□□□□□ -0.43
PRPF3-205ENST00000476970 ZMYM3Q14202 1370 aa12.39□□□□□ -0.43
PRPF3-205ENST00000476970 PTPRKQ15262 1439 aa12.37□□□□□ -0.43
PRPF3-205ENST00000476970 ATP1B4Q9UN42 357 aaPredicted RBP12.36□□□□□ -0.43
PRPF3-205ENST00000476970 SAMD9LQ8IVG5 1584 aa12.35□□□□□ -0.43
PRPF3-205ENST00000476970 A2ML1A8K2U0 1454 aa12.34□□□□□ -0.43
PRPF3-205ENST00000476970 CDC42BPAQ5VT25 1732 aa12.34□□□□□ -0.43
PRPF3-205ENST00000476970 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
PRPF3-205ENST00000476970 DNMT1P26358 1616 aaKnown RBP12.33□□□□□ -0.43
PRPF3-205ENST00000476970 PLXNC1O60486 1568 aa12.33□□□□□ -0.44
PRPF3-205ENST00000476970 LRRIQ1Q96JM4 1722 aa12.33□□□□□ -0.44
PRPF3-205ENST00000476970 NEURL4Q96JN8 1562 aa12.32□□□□□ -0.44
PRPF3-205ENST00000476970 ATP7AQ04656 1500 aa12.32□□□□□ -0.44
PRPF3-205ENST00000476970 RNF17Q9BXT8 1623 aaKnown RBP12.3□□□□□ -0.44
PRPF3-205ENST00000476970 INO80Q9ULG1 1556 aaPredicted RBP12.3□□□□□ -0.44
PRPF3-205ENST00000476970 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
PRPF3-205ENST00000476970 SYCP2Q9BX26 1530 aa12.29□□□□□ -0.44
PRPF3-205ENST00000476970 SYNMO15061 1565 aa12.29□□□□□ -0.44
PRPF3-205ENST00000476970 SPAG9O60271 1321 aaKnown RBP12.29□□□□□ -0.44
PRPF3-205ENST00000476970 A2MP01023 1474 aa12.28□□□□□ -0.44
PRPF3-205ENST00000476970 CCDC18Q5T9S5 1454 aa12.28□□□□□ -0.44
PRPF3-205ENST00000476970 VWDEQ8N2E2 1590 aa12.28□□□□□ -0.44
PRPF3-205ENST00000476970 ALKQ9UM73 1620 aa12.28□□□□□ -0.44
PRPF3-205ENST00000476970 ARHGAP35Q9NRY4 1499 aa12.27□□□□□ -0.45
PRPF3-205ENST00000476970 DEPDC5O75140 1603 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms