RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 CDC42BPAQ5VT25 1732 aa23.71■■□□□ 1.39
TMEM53-208ENST00000476724 GTF3C3Q9Y5Q9 886 aa23.71■■□□□ 1.39
TMEM53-208ENST00000476724 ZCCHC11Q5TAX3 1644 aaKnown RBP23.69■■□□□ 1.38
TMEM53-208ENST00000476724 UHRF1BP1LA0JNW5 1464 aa23.69■■□□□ 1.38
TMEM53-208ENST00000476724 YTHDC1Q96MU7 727 aaKnown RBP23.66■■□□□ 1.38
TMEM53-208ENST00000476724 CFDP1Q9UEE9 299 aaPredicted RBP23.66■■□□□ 1.38
TMEM53-208ENST00000476724 CAMSAP2Q08AD1 1489 aa23.65■■□□□ 1.38
TMEM53-208ENST00000476724 CHIC2Q9UKJ5 165 aa23.65■■□□□ 1.38
TMEM53-208ENST00000476724 DNMT1P26358 1616 aaKnown RBP23.64■■□□□ 1.38
TMEM53-208ENST00000476724 KDM5BQ9UGL1 1544 aa23.64■■□□□ 1.37
TMEM53-208ENST00000476724 SIN3AQ96ST3 1273 aa23.63■■□□□ 1.37
TMEM53-208ENST00000476724 NAIPQ13075 1403 aa23.63■■□□□ 1.37
TMEM53-208ENST00000476724 DAPK1P53355 1430 aa23.62■■□□□ 1.37
TMEM53-208ENST00000476724 ZNF777Q9ULD5 760 aaPredicted RBP23.61■■□□□ 1.37
TMEM53-208ENST00000476724 ABCC5O15440 1437 aa23.61■■□□□ 1.37
TMEM53-208ENST00000476724 RRP7BPQ9NSQ0 103 aa23.59■■□□□ 1.37
TMEM53-208ENST00000476724 TTC37Q6PGP7 1564 aa23.59■■□□□ 1.37
TMEM53-208ENST00000476724 GCC2Q8IWJ2 1684 aa23.58■■□□□ 1.37
TMEM53-208ENST00000476724 CDC42BPBQ9Y5S2 1711 aa23.58■■□□□ 1.37
TMEM53-208ENST00000476724 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.57■■□□□ 1.36
TMEM53-208ENST00000476724 PREX2Q70Z35 1606 aa23.56■■□□□ 1.36
TMEM53-208ENST00000476724 PELP1Q8IZL8 1130 aaKnown RBP23.56■■□□□ 1.36
TMEM53-208ENST00000476724 PPP1R15AO75807 674 aaPredicted RBP23.55■■□□□ 1.36
TMEM53-208ENST00000476724 AKNAQ7Z591 1439 aa23.54■■□□□ 1.36
TMEM53-208ENST00000476724 KDM6BO15054 1643 aa23.54■■□□□ 1.36
TMEM53-208ENST00000476724 KCNH8Q96L42 1107 aa23.53■■□□□ 1.36
TMEM53-208ENST00000476724 CROCC2H7BZ55 1655 aa23.52■■□□□ 1.36
TMEM53-208ENST00000476724 SAMD9LQ8IVG5 1584 aa23.49■■□□□ 1.35
TMEM53-208ENST00000476724 MYO5CQ9NQX4 1742 aa23.49■■□□□ 1.35
TMEM53-208ENST00000476724 ROCK1Q13464 1354 aa23.47■■□□□ 1.35
TMEM53-208ENST00000476724 TONSLQ96HA7 1378 aa23.47■■□□□ 1.35
TMEM53-208ENST00000476724 ADGBQ8N7X0 1667 aa23.47■■□□□ 1.35
TMEM53-208ENST00000476724 ARHGAP5Q13017 1502 aa23.44■■□□□ 1.34
TMEM53-208ENST00000476724 HNRNPMP52272 730 aaKnown RBP eCLIP23.42■■□□□ 1.34
TMEM53-208ENST00000476724 WDR7Q9Y4E6 1490 aa23.42■■□□□ 1.34
TMEM53-208ENST00000476724 MBD5Q9P267 1494 aa23.41■■□□□ 1.34
TMEM53-208ENST00000476724 ARHGEF5Q12774 1597 aa23.4■■□□□ 1.34
TMEM53-208ENST00000476724 NCOA1Q15788 1441 aa23.4■■□□□ 1.34
TMEM53-208ENST00000476724 ADGRL2O95490 1459 aa23.4■■□□□ 1.34
TMEM53-208ENST00000476724 PLCH2O75038 1416 aa23.38■■□□□ 1.33
TMEM53-208ENST00000476724 SYCP2Q9BX26 1530 aa23.37■■□□□ 1.33
TMEM53-208ENST00000476724 ASXL2Q76L83 1435 aa23.37■■□□□ 1.33
TMEM53-208ENST00000476724 SHANK2Q9UPX8 1470 aa23.36■■□□□ 1.33
TMEM53-208ENST00000476724 C9orf84Q5VXU9 1444 aa23.36■■□□□ 1.33
TMEM53-208ENST00000476724 TRIM52Q96A61 297 aa23.34■■□□□ 1.33
TMEM53-208ENST00000476724 DENND4BO75064 1496 aaPredicted RBP23.33■■□□□ 1.33
TMEM53-208ENST00000476724 CCDC141Q6ZP82 1450 aa23.33■■□□□ 1.33
TMEM53-208ENST00000476724 ANKRD30AQ9BXX3 1397 aa23.33■■□□□ 1.32
TMEM53-208ENST00000476724 DDX10Q13206 875 aaKnown RBP23.31■■□□□ 1.32
TMEM53-208ENST00000476724 ABCA9Q8IUA7 1624 aa23.31■■□□□ 1.32
TMEM53-208ENST00000476724 ARHGEF12Q9NZN5 1544 aa23.31■■□□□ 1.32
TMEM53-208ENST00000476724 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
TMEM53-208ENST00000476724 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
TMEM53-208ENST00000476724 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
TMEM53-208ENST00000476724 TSPY4P0CV99 314 aa23.3■■□□□ 1.32
TMEM53-208ENST00000476724 TSPY10P0CW01 314 aa23.3■■□□□ 1.32
TMEM53-208ENST00000476724 NPM1P06748 294 aaKnown RBP eCLIP23.29■■□□□ 1.32
TMEM53-208ENST00000476724 KIAA1107Q9UPP5 1409 aa23.27■■□□□ 1.32
TMEM53-208ENST00000476724 EFCAB2Q5VUJ9 269 aa23.27■■□□□ 1.32
TMEM53-208ENST00000476724 PLEKHH2Q8IVE3 1493 aa23.26■■□□□ 1.31
TMEM53-208ENST00000476724 MPHOSPH9Q99550 1183 aa23.26■■□□□ 1.31
TMEM53-208ENST00000476724 ABCC1P33527 1531 aa23.26■■□□□ 1.31
TMEM53-208ENST00000476724 ARAP3Q8WWN8 1544 aa23.26■■□□□ 1.31
TMEM53-208ENST00000476724 RSPH4AQ5TD94 716 aa23.25■■□□□ 1.31
TMEM53-208ENST00000476724 ANKRD50Q9ULJ7 1429 aa23.24■■□□□ 1.31
TMEM53-208ENST00000476724 MAST1Q9Y2H9 1570 aa23.23■■□□□ 1.31
TMEM53-208ENST00000476724 CYB5RLQ6IPT4 315 aa23.23■■□□□ 1.31
TMEM53-208ENST00000476724 KIF15Q9NS87 1388 aa23.22■■□□□ 1.31
TMEM53-208ENST00000476724 TRAPPC8Q9Y2L5 1435 aa23.2■■□□□ 1.3
TMEM53-208ENST00000476724 CCER2I3L3R5 266 aa23.19■■□□□ 1.3
TMEM53-208ENST00000476724 FANCAO15360 1455 aa23.19■■□□□ 1.3
TMEM53-208ENST00000476724 FOXD1Q16676 465 aa23.19■■□□□ 1.3
TMEM53-208ENST00000476724 PZPP20742 1482 aa23.18■■□□□ 1.3
TMEM53-208ENST00000476724 HIRIP3Q9BW71 556 aaPredicted RBP23.17■■□□□ 1.3
TMEM53-208ENST00000476724 ANP32CO43423 234 aa23.17■■□□□ 1.3
TMEM53-208ENST00000476724 PLXNC1O60486 1568 aa23.15■■□□□ 1.3
TMEM53-208ENST00000476724 SLC4A1APQ9BWU0 796 aaKnown RBP23.14■■□□□ 1.29
TMEM53-208ENST00000476724 ANKRD30BQ9BXX2 1392 aa23.13■■□□□ 1.29
TMEM53-208ENST00000476724 AFAP1Q8N556 730 aa23.11■■□□□ 1.29
TMEM53-208ENST00000476724 RPRD2Q5VT52 1461 aaKnown RBP23.1■■□□□ 1.29
TMEM53-208ENST00000476724 ADGRL1O94910 1474 aa23.09■■□□□ 1.29
TMEM53-208ENST00000476724 CD109Q6YHK3 1445 aa23.09■■□□□ 1.29
TMEM53-208ENST00000476724 NUP155O75694 1391 aa23.08■■□□□ 1.28
TMEM53-208ENST00000476724 SCAPERQ9BY12 1400 aa23.07■■□□□ 1.28
TMEM53-208ENST00000476724 KDM5DQ9BY66 1539 aa23.07■■□□□ 1.28
TMEM53-208ENST00000476724 ZFYVE16Q7Z3T8 1539 aa23.06■■□□□ 1.28
TMEM53-208ENST00000476724 L3MBTL2Q969R5 705 aa23.06■■□□□ 1.28
TMEM53-208ENST00000476724 EIF4G2P78344 907 aaKnown RBP eCLIP23.05■■□□□ 1.28
TMEM53-208ENST00000476724 SPAG9O60271 1321 aaKnown RBP23.05■■□□□ 1.28
TMEM53-208ENST00000476724 DUOX2Q9NRD8 1548 aa23.05■■□□□ 1.28
TMEM53-208ENST00000476724 HSPA5P11021 654 aaKnown RBP23.03■■□□□ 1.28
TMEM53-208ENST00000476724 PKD2Q13563 968 aa23.02■■□□□ 1.28
TMEM53-208ENST00000476724 INO80Q9ULG1 1556 aaPredicted RBP23.02■■□□□ 1.28
TMEM53-208ENST00000476724 RTEL1-TNFRSF6BF6WH68 1400 aa23.02■■□□□ 1.28
TMEM53-208ENST00000476724 UNC13BO14795 1591 aa23.02■■□□□ 1.27
TMEM53-208ENST00000476724 CFAP74Q9C0B2 1584 aa23.01■■□□□ 1.27
TMEM53-208ENST00000476724 ATP7AQ04656 1500 aa23■■□□□ 1.27
TMEM53-208ENST00000476724 TEX14Q8IWB6 1497 aa23■■□□□ 1.27
TMEM53-208ENST00000476724 SUPT16HQ9Y5B9 1047 aaKnown RBP22.99■■□□□ 1.27
TMEM53-208ENST00000476724 ERBINQ96RT1 1412 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms