RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 CNTLNQ9NXG0 1405 aa11.53□□□□□ -0.56
MACF1-216ENST00000476350 WASHC2AQ641Q2 1341 aa11.53□□□□□ -0.56
MACF1-216ENST00000476350 UGGT2Q9NYU1 1516 aa11.53□□□□□ -0.56
MACF1-216ENST00000476350 SLC24A1O60721 1099 aa11.52□□□□□ -0.57
MACF1-216ENST00000476350 RRP7BPQ9NSQ0 103 aa11.51□□□□□ -0.57
MACF1-216ENST00000476350 PPP4R2Q9NY27 417 aa11.51□□□□□ -0.57
MACF1-216ENST00000476350 EIF4G2P78344 907 aaKnown RBP eCLIP11.5□□□□□ -0.57
MACF1-216ENST00000476350 ERICH6BQ5W0A0 696 aa11.5□□□□□ -0.57
MACF1-216ENST00000476350 CHIC2Q9UKJ5 165 aa11.5□□□□□ -0.57
MACF1-216ENST00000476350 A0A0G2JS52 829 aa11.49□□□□□ -0.57
MACF1-216ENST00000476350 TCOF1Q13428 1488 aaKnown RBP11.49□□□□□ -0.57
MACF1-216ENST00000476350 KDM6BO15054 1643 aa11.48□□□□□ -0.57
MACF1-216ENST00000476350 ARHGEF11O15085 1522 aa11.48□□□□□ -0.57
MACF1-216ENST00000476350 FAM9BQ8IZU0 186 aa11.48□□□□□ -0.57
MACF1-216ENST00000476350 ABCA5Q8WWZ7 1642 aa11.48□□□□□ -0.57
MACF1-216ENST00000476350 MAGI3Q5TCQ9 1506 aa11.47□□□□□ -0.57
MACF1-216ENST00000476350 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.57
MACF1-216ENST00000476350 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
MACF1-216ENST00000476350 NESP48681 1621 aa11.45□□□□□ -0.58
MACF1-216ENST00000476350 DENND4BO75064 1496 aaPredicted RBP11.45□□□□□ -0.58
MACF1-216ENST00000476350 CCDC7Q96M83 1385 aa11.45□□□□□ -0.58
MACF1-216ENST00000476350 MRS2Q9HD23 443 aa11.45□□□□□ -0.58
MACF1-216ENST00000476350 CCDC184Q52MB2 194 aa11.44□□□□□ -0.58
MACF1-216ENST00000476350 NCOA1Q15788 1441 aa11.44□□□□□ -0.58
MACF1-216ENST00000476350 MPHOSPH9Q99550 1183 aa11.44□□□□□ -0.58
MACF1-216ENST00000476350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.44□□□□□ -0.581e-6■□□□□ 9.8
MACF1-216ENST00000476350 ZBED9Q6R2W3 1325 aa11.43□□□□□ -0.58
MACF1-216ENST00000476350 GAPVD1Q14C86 1478 aa11.43□□□□□ -0.58
MACF1-216ENST00000476350 MLECQ14165 292 aa11.43□□□□□ -0.58
MACF1-216ENST00000476350 URB2Q14146 1524 aaKnown RBP11.42□□□□□ -0.58
MACF1-216ENST00000476350 POLR1AO95602 1720 aaPredicted RBP11.42□□□□□ -0.58
MACF1-216ENST00000476350 B4GALNT3Q6L9W6 998 aa11.42□□□□□ -0.58
MACF1-216ENST00000476350 PRKRIP1Q9H875 184 aaPredicted RBP11.42□□□□□ -0.58
MACF1-216ENST00000476350 AKNAQ7Z591 1439 aa11.42□□□□□ -0.58
MACF1-216ENST00000476350 L3MBTL2Q969R5 705 aa11.41□□□□□ -0.58
MACF1-216ENST00000476350 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
MACF1-216ENST00000476350 KANK1Q14678 1352 aa11.41□□□□□ -0.58
MACF1-216ENST00000476350 C11orf95C9JLR9 678 aaPredicted RBP11.39□□□□□ -0.59
MACF1-216ENST00000476350 PHF23Q9BUL5 403 aaPredicted RBP11.39□□□□□ -0.59
MACF1-216ENST00000476350 CDK13Q14004 1512 aaKnown RBP11.39□□□□□ -0.59
MACF1-216ENST00000476350 EID1Q9Y6B2 187 aa11.39□□□□□ -0.59
MACF1-216ENST00000476350 EPRSP07814 1512 aaKnown RBP11.38□□□□□ -0.59
MACF1-216ENST00000476350 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
MACF1-216ENST00000476350 MIA2Q96PC5 1412 aa11.38□□□□□ -0.59
MACF1-216ENST00000476350 PBRM1Q86U86 1689 aa11.38□□□□□ -0.59
MACF1-216ENST00000476350 EFCAB2Q5VUJ9 269 aa11.37□□□□□ -0.59
MACF1-216ENST00000476350 NOP58Q9Y2X3 529 aaKnown RBP11.37□□□□□ -0.59
MACF1-216ENST00000476350 KIF7Q2M1P5 1343 aa11.37□□□□□ -0.59
MACF1-216ENST00000476350 TEX14Q8IWB6 1497 aa11.36□□□□□ -0.59
MACF1-216ENST00000476350 DAPK1P53355 1430 aa11.36□□□□□ -0.59
MACF1-216ENST00000476350 WDR62O43379 1518 aa11.36□□□□□ -0.59
MACF1-216ENST00000476350 RPRD2Q5VT52 1461 aaKnown RBP11.36□□□□□ -0.59
MACF1-216ENST00000476350 CFDP1Q9UEE9 299 aaPredicted RBP11.36□□□□□ -0.59
MACF1-216ENST00000476350 SMG6Q86US8 1419 aaKnown RBP11.35□□□□□ -0.59
MACF1-216ENST00000476350 IQGAP2Q13576 1575 aa11.35□□□□□ -0.59
MACF1-216ENST00000476350 DNMT1P26358 1616 aaKnown RBP11.35□□□□□ -0.59
MACF1-216ENST00000476350 NBPF8Q3BBV2 869 aa11.34□□□□□ -0.59
MACF1-216ENST00000476350 ANKRD30BQ9BXX2 1392 aa11.34□□□□□ -0.59
MACF1-216ENST00000476350 DEKP35659 375 aaKnown RBP11.34□□□□□ -0.59
MACF1-216ENST00000476350 FAM69CQ0P6D2 419 aa11.33□□□□□ -0.59
MACF1-216ENST00000476350 CNGB1Q14028 1251 aaPredicted RBP11.33□□□□□ -0.59
MACF1-216ENST00000476350 ROCK1Q13464 1354 aa11.33□□□□□ -0.6
MACF1-216ENST00000476350 NBR1Q14596 966 aa11.32□□□□□ -0.6
MACF1-216ENST00000476350 NUDCQ9Y266 331 aa11.31□□□□□ -0.6
MACF1-216ENST00000476350 KIF14Q15058 1648 aa11.31□□□□□ -0.6
MACF1-216ENST00000476350 SPATA31E1Q6ZUB1 1445 aa11.31□□□□□ -0.6
MACF1-216ENST00000476350 ANP32AP39687 249 aaKnown RBP11.31□□□□□ -0.6
MACF1-216ENST00000476350 MEX3CQ5U5Q3 659 aaKnown RBP11.31□□□□□ -0.6
MACF1-216ENST00000476350 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
MACF1-216ENST00000476350 ABCC5O15440 1437 aa11.31□□□□□ -0.6
MACF1-216ENST00000476350 ADAMTS12P58397 1594 aa11.3□□□□□ -0.6
MACF1-216ENST00000476350 ADGBQ8N7X0 1667 aa11.3□□□□□ -0.6
MACF1-216ENST00000476350 CCDC136Q96JN2 1154 aa11.3□□□□□ -0.6
MACF1-216ENST00000476350 LMOD2Q6P5Q4 547 aa11.3□□□□□ -0.6
MACF1-216ENST00000476350 DHX29Q7Z478 1369 aaKnown RBP11.28□□□□□ -0.6
MACF1-216ENST00000476350 USP47Q96K76 1375 aa11.27□□□□□ -0.6
MACF1-216ENST00000476350 MBD5Q9P267 1494 aa11.27□□□□□ -0.61
MACF1-216ENST00000476350 BCORL1Q5H9F3 1711 aa11.27□□□□□ -0.61
MACF1-216ENST00000476350 KDM5CP41229 1560 aa11.27□□□□□ -0.61
MACF1-216ENST00000476350 ZBTB7CA1YPR0 619 aa11.26□□□□□ -0.61
MACF1-216ENST00000476350 JPH4Q96JJ6 628 aa11.26□□□□□ -0.61
MACF1-216ENST00000476350 PZPP20742 1482 aa11.26□□□□□ -0.61
MACF1-216ENST00000476350 DMRT2Q9Y5R5 561 aa11.25□□□□□ -0.61
MACF1-216ENST00000476350 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
MACF1-216ENST00000476350 CROCC2H7BZ55 1655 aa11.25□□□□□ -0.61
MACF1-216ENST00000476350 NPHP1O15259 732 aa11.25□□□□□ -0.61
MACF1-216ENST00000476350 IPO9Q96P70 1041 aaKnown RBP11.25□□□□□ -0.61
MACF1-216ENST00000476350 RAPGEF6Q8TEU7 1601 aa11.25□□□□□ -0.61
MACF1-216ENST00000476350 CAMSAP2Q08AD1 1489 aa11.25□□□□□ -0.61
MACF1-216ENST00000476350 ZNF644Q9H582 1327 aaPredicted RBP11.25□□□□□ -0.61
MACF1-216ENST00000476350 KIAA0556O60303 1618 aa11.25□□□□□ -0.61
MACF1-216ENST00000476350 SENP3-EIF4A1A0A087X0R7 540 aa11.24□□□□□ -0.61
MACF1-216ENST00000476350 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
MACF1-216ENST00000476350 ITSN2Q9NZM3 1697 aa11.24□□□□□ -0.61
MACF1-216ENST00000476350 CCDC9Q9Y3X0 531 aaKnown RBP11.23□□□□□ -0.61
MACF1-216ENST00000476350 KIAA1107Q9UPP5 1409 aa11.22□□□□□ -0.61
MACF1-216ENST00000476350 RNF123Q5XPI4 1314 aa11.22□□□□□ -0.61
MACF1-216ENST00000476350 TMC1Q8TDI8 760 aa11.22□□□□□ -0.61
MACF1-216ENST00000476350 ROCK2O75116 1388 aaKnown RBP11.22□□□□□ -0.61
MACF1-216ENST00000476350 SF3B2Q13435 895 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms