RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 IQSEC2Q5JU85 1478 aa17.49■□□□□ 0.39
CCHCR1-212ENST00000475684 UHRF1BP1Q6BDS2 1440 aa17.48■□□□□ 0.39
CCHCR1-212ENST00000475684 ZMYM4Q5VZL5 1548 aa17.47■□□□□ 0.39
CCHCR1-212ENST00000475684 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
CCHCR1-212ENST00000475684 MAGI2Q86UL8 1455 aa17.46■□□□□ 0.39
CCHCR1-212ENST00000475684 ARHGEF12Q9NZN5 1544 aa17.46■□□□□ 0.39
CCHCR1-212ENST00000475684 CFAP74Q9C0B2 1584 aa17.44■□□□□ 0.38
CCHCR1-212ENST00000475684 UBAP1LF5GYI3 381 aa17.43■□□□□ 0.38
CCHCR1-212ENST00000475684 HECW1Q76N89 1606 aa17.42■□□□□ 0.38
CCHCR1-212ENST00000475684 RAPGEF6Q8TEU7 1601 aa17.39■□□□□ 0.38
CCHCR1-212ENST00000475684 ATP10AO60312 1499 aa17.39■□□□□ 0.37
CCHCR1-212ENST00000475684 PLEKHD1A6NEE1 506 aa17.39■□□□□ 0.37
CCHCR1-212ENST00000475684 C9orf84Q5VXU9 1444 aa17.37■□□□□ 0.37
CCHCR1-212ENST00000475684 SCAPERQ9BY12 1400 aa17.35■□□□□ 0.37
CCHCR1-212ENST00000475684 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCHCR1-212ENST00000475684 NUP153P49790 1475 aaKnown RBP17.33■□□□□ 0.37
CCHCR1-212ENST00000475684 MED1Q15648 1581 aaPredicted RBP17.32■□□□□ 0.36
CCHCR1-212ENST00000475684 SETD1BQ9UPS6 1966 aaKnown RBP17.31■□□□□ 0.36
CCHCR1-212ENST00000475684 NCOA1Q15788 1441 aa17.31■□□□□ 0.36
CCHCR1-212ENST00000475684 ZNF335Q9H4Z2 1342 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-212ENST00000475684 ESF1Q9H501 851 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-212ENST00000475684 HSPA1LP34931 641 aa17.28■□□□□ 0.36
CCHCR1-212ENST00000475684 PRXQ9BXM0 1461 aa17.28■□□□□ 0.36
CCHCR1-212ENST00000475684 TRAPPC8Q9Y2L5 1435 aa17.28■□□□□ 0.36
CCHCR1-212ENST00000475684 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.36
CCHCR1-212ENST00000475684 C3P01024 1663 aa17.27■□□□□ 0.36
CCHCR1-212ENST00000475684 SAMD9Q5K651 1589 aa17.27■□□□□ 0.35
CCHCR1-212ENST00000475684 NCKAP5LQ9HCH0 1330 aa17.25■□□□□ 0.35
CCHCR1-212ENST00000475684 MYT1LQ9UL68 1186 aa17.25■□□□□ 0.35
CCHCR1-212ENST00000475684 PLCH2O75038 1416 aa17.24■□□□□ 0.35
CCHCR1-212ENST00000475684 PIP4K2BP78356 416 aa17.24■□□□□ 0.35
CCHCR1-212ENST00000475684 CAMSAP1Q5T5Y3 1602 aa17.23■□□□□ 0.35
CCHCR1-212ENST00000475684 EFCAB2Q5VUJ9 269 aa17.21■□□□□ 0.35
CCHCR1-212ENST00000475684 RANGAP1P46060 587 aaPredicted RBP17.2■□□□□ 0.34
CCHCR1-212ENST00000475684 AFAP1Q8N556 730 aa17.19■□□□□ 0.34
CCHCR1-212ENST00000475684 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
CCHCR1-212ENST00000475684 TOM1O60784 492 aa17.17■□□□□ 0.34
CCHCR1-212ENST00000475684 PKD2Q13563 968 aa17.15■□□□□ 0.34
CCHCR1-212ENST00000475684 DIP2CQ9Y2E4 1556 aa17.15■□□□□ 0.34
CCHCR1-212ENST00000475684 REREQ9P2R6 1566 aa17.14■□□□□ 0.33
CCHCR1-212ENST00000475684 CNTLNQ9NXG0 1405 aa17.13■□□□□ 0.33
CCHCR1-212ENST00000475684 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
CCHCR1-212ENST00000475684 AGLP35573 1532 aa17.11■□□□□ 0.33
CCHCR1-212ENST00000475684 KDM5CP41229 1560 aa17.11■□□□□ 0.33
CCHCR1-212ENST00000475684 NPATQ14207 1427 aa17.11■□□□□ 0.33
CCHCR1-212ENST00000475684 CDK13Q14004 1512 aaKnown RBP17.1■□□□□ 0.33
CCHCR1-212ENST00000475684 MYO5CQ9NQX4 1742 aa17.1■□□□□ 0.33
CCHCR1-212ENST00000475684 ABCA6Q8N139 1617 aa17.08■□□□□ 0.32
CCHCR1-212ENST00000475684 PLA2R1Q13018 1463 aa17.08■□□□□ 0.32
CCHCR1-212ENST00000475684 TCOF1Q13428 1488 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-212ENST00000475684 MLH3Q9UHC1 1453 aa17.06■□□□□ 0.32
CCHCR1-212ENST00000475684 ZMYM3Q14202 1370 aa17.06■□□□□ 0.32
CCHCR1-212ENST00000475684 ARHGAP5Q13017 1502 aa17.06■□□□□ 0.32
CCHCR1-212ENST00000475684 ADRA2BP18089 450 aa17.05■□□□□ 0.32
CCHCR1-212ENST00000475684 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-212ENST00000475684 SUPT6HQ7KZ85 1726 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-212ENST00000475684 MROH2AA6NES4 1674 aa17.02■□□□□ 0.32
CCHCR1-212ENST00000475684 CPS1P31327 1500 aa17.01■□□□□ 0.31
CCHCR1-212ENST00000475684 ZNF142P52746 1687 aaPredicted RBP17.01■□□□□ 0.31
CCHCR1-212ENST00000475684 MYO3AQ8NEV4 1616 aa17■□□□□ 0.31
CCHCR1-212ENST00000475684 PTPRKQ15262 1439 aa17■□□□□ 0.31
CCHCR1-212ENST00000475684 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
CCHCR1-212ENST00000475684 RGS17Q9UGC6 210 aaPredicted RBP17■□□□□ 0.31
CCHCR1-212ENST00000475684 CDK11AQ9UQ88 783 aaPredicted RBP17■□□□□ 0.31
CCHCR1-212ENST00000475684 CEP170BQ9Y4F5 1589 aaPredicted RBP17■□□□□ 0.31
CCHCR1-212ENST00000475684 SHANK2Q9UPX8 1470 aa16.99■□□□□ 0.31
CCHCR1-212ENST00000475684 KIF14Q15058 1648 aa16.98■□□□□ 0.31
CCHCR1-212ENST00000475684 CLTCQ00610 1675 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-212ENST00000475684 KIDINS220Q9ULH0 1771 aa16.93■□□□□ 0.3
CCHCR1-212ENST00000475684 ALKQ9UM73 1620 aa16.92■□□□□ 0.3
CCHCR1-212ENST00000475684 ABCC1P33527 1531 aa16.91■□□□□ 0.3
CCHCR1-212ENST00000475684 CLIP1P30622 1438 aa16.9■□□□□ 0.3
CCHCR1-212ENST00000475684 TROQ12816 1431 aaPredicted RBP16.9■□□□□ 0.3
CCHCR1-212ENST00000475684 CDC42BPBQ9Y5S2 1711 aa16.9■□□□□ 0.3
CCHCR1-212ENST00000475684 DNMT1P26358 1616 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-212ENST00000475684 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
CCHCR1-212ENST00000475684 A2ML1A8K2U0 1454 aa16.89■□□□□ 0.29
CCHCR1-212ENST00000475684 GGT6Q6P531 493 aa16.88■□□□□ 0.29
CCHCR1-212ENST00000475684 POTEAQ6S8J7 498 aa16.88■□□□□ 0.29
CCHCR1-212ENST00000475684 NEURL4Q96JN8 1562 aa16.87■□□□□ 0.29
CCHCR1-212ENST00000475684 POLR1AO95602 1720 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-212ENST00000475684 VWDEQ8N2E2 1590 aa16.85■□□□□ 0.29
CCHCR1-212ENST00000475684 ANKLE2Q86XL3 938 aa16.85■□□□□ 0.29
CCHCR1-212ENST00000475684 SPAG9O60271 1321 aaKnown RBP16.84■□□□□ 0.29
CCHCR1-212ENST00000475684 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
CCHCR1-212ENST00000475684 PREX2Q70Z35 1606 aa16.83■□□□□ 0.28
CCHCR1-212ENST00000475684 SAMD9LQ8IVG5 1584 aa16.82■□□□□ 0.28
CCHCR1-212ENST00000475684 ZNF777Q9ULD5 760 aaPredicted RBP16.81■□□□□ 0.28
CCHCR1-212ENST00000475684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCHCR1-212ENST00000475684 LRRC7Q96NW7 1537 aa16.79■□□□□ 0.28
CCHCR1-212ENST00000475684 A2MP01023 1474 aa16.79■□□□□ 0.28
CCHCR1-212ENST00000475684 NPHP4O75161 1426 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-212ENST00000475684 HNRNPMP52272 730 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCHCR1-212ENST00000475684 THEMISQ8N1K5 641 aaPredicted RBP16.78■□□□□ 0.28
CCHCR1-212ENST00000475684 RNF17Q9BXT8 1623 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-212ENST00000475684 PLXNC1O60486 1568 aa16.77■□□□□ 0.27
CCHCR1-212ENST00000475684 TNRQ92752 1358 aa16.77■□□□□ 0.27
CCHCR1-212ENST00000475684 FBXO31Q5XUX0 539 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-212ENST00000475684 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-212ENST00000475684 SETD1AO15047 1707 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms