RNA–Protein interactions for RNA: ENST00000475480.5

TMEM41A-206, Transcript of transmembrane protein 41A, humanhuman

TSL 3

Gene TMEM41A, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-206ENST00000475480 RAPGEF6Q8TEU7 1601 aa23.97■■□□□ 1.43
TMEM41A-206ENST00000475480 UHRF1BP1Q6BDS2 1440 aa23.96■■□□□ 1.43
TMEM41A-206ENST00000475480 P3H3Q8IVL6 736 aa23.94■■□□□ 1.42
TMEM41A-206ENST00000475480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.9■■□□□ 1.42
TMEM41A-206ENST00000475480 HNRNPUL2Q1KMD3 747 aaKnown RBP23.9■■□□□ 1.42
TMEM41A-206ENST00000475480 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
TMEM41A-206ENST00000475480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.87■■□□□ 1.41
TMEM41A-206ENST00000475480 ATP10AO60312 1499 aa23.85■■□□□ 1.41
TMEM41A-206ENST00000475480 NUP153P49790 1475 aaKnown RBP23.85■■□□□ 1.41
TMEM41A-206ENST00000475480 MED1Q15648 1581 aaPredicted RBP23.85■■□□□ 1.41
TMEM41A-206ENST00000475480 C3P01024 1663 aa23.85■■□□□ 1.41
TMEM41A-206ENST00000475480 C9orf84Q5VXU9 1444 aa23.84■■□□□ 1.41
TMEM41A-206ENST00000475480 SAMD9Q5K651 1589 aa23.82■■□□□ 1.4
TMEM41A-206ENST00000475480 UBAP1LF5GYI3 381 aa23.81■■□□□ 1.4
TMEM41A-206ENST00000475480 NCOA1Q15788 1441 aa23.79■■□□□ 1.4
TMEM41A-206ENST00000475480 SCAPERQ9BY12 1400 aa23.78■■□□□ 1.4
TMEM41A-206ENST00000475480 PRXQ9BXM0 1461 aa23.76■■□□□ 1.39
TMEM41A-206ENST00000475480 PLEKHD1A6NEE1 506 aa23.75■■□□□ 1.39
TMEM41A-206ENST00000475480 ZNF335Q9H4Z2 1342 aaPredicted RBP23.71■■□□□ 1.39
TMEM41A-206ENST00000475480 CAMSAP1Q5T5Y3 1602 aa23.7■■□□□ 1.38
TMEM41A-206ENST00000475480 TRAPPC8Q9Y2L5 1435 aa23.67■■□□□ 1.38
TMEM41A-206ENST00000475480 HSPA1LP34931 641 aa23.66■■□□□ 1.38
TMEM41A-206ENST00000475480 PLCH2O75038 1416 aa23.65■■□□□ 1.38
TMEM41A-206ENST00000475480 DIP2CQ9Y2E4 1556 aa23.64■■□□□ 1.37
TMEM41A-206ENST00000475480 REREQ9P2R6 1566 aa23.62■■□□□ 1.37
TMEM41A-206ENST00000475480 MYO5CQ9NQX4 1742 aa23.61■■□□□ 1.37
TMEM41A-206ENST00000475480 NCKAP5LQ9HCH0 1330 aa23.6■■□□□ 1.37
TMEM41A-206ENST00000475480 KDM5CP41229 1560 aa23.6■■□□□ 1.37
TMEM41A-206ENST00000475480 ABCA6Q8N139 1617 aa23.58■■□□□ 1.36
TMEM41A-206ENST00000475480 ZNF518AQ6AHZ1 1483 aa23.57■■□□□ 1.36
TMEM41A-206ENST00000475480 SUPT6HQ7KZ85 1726 aaKnown RBP23.56■■□□□ 1.36
TMEM41A-206ENST00000475480 AGLP35573 1532 aa23.55■■□□□ 1.36
TMEM41A-206ENST00000475480 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
TMEM41A-206ENST00000475480 SCAF1Q9H7N4 1312 aaKnown RBP23.55■■□□□ 1.36
TMEM41A-206ENST00000475480 PIP4K2BP78356 416 aa23.53■■□□□ 1.36
TMEM41A-206ENST00000475480 CDK13Q14004 1512 aaKnown RBP23.53■■□□□ 1.36
TMEM41A-206ENST00000475480 EFCAB2Q5VUJ9 269 aa23.52■■□□□ 1.36
TMEM41A-206ENST00000475480 AFAP1Q8N556 730 aa23.52■■□□□ 1.36
TMEM41A-206ENST00000475480 ESF1Q9H501 851 aaKnown RBP23.52■■□□□ 1.36
TMEM41A-206ENST00000475480 MROH2AA6NES4 1674 aa23.51■■□□□ 1.35
TMEM41A-206ENST00000475480 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
TMEM41A-206ENST00000475480 NPATQ14207 1427 aa23.48■■□□□ 1.35
TMEM41A-206ENST00000475480 TCOF1Q13428 1488 aaKnown RBP23.48■■□□□ 1.35
TMEM41A-206ENST00000475480 MYT1LQ9UL68 1186 aa23.47■■□□□ 1.35
TMEM41A-206ENST00000475480 CNTLNQ9NXG0 1405 aa23.47■■□□□ 1.35
TMEM41A-206ENST00000475480 PLA2R1Q13018 1463 aa23.47■■□□□ 1.35
TMEM41A-206ENST00000475480 MYO3AQ8NEV4 1616 aa23.46■■□□□ 1.35
TMEM41A-206ENST00000475480 PKD2Q13563 968 aa23.45■■□□□ 1.34
TMEM41A-206ENST00000475480 MLH3Q9UHC1 1453 aa23.44■■□□□ 1.34
TMEM41A-206ENST00000475480 RANGAP1P46060 587 aaPredicted RBP23.44■■□□□ 1.34
TMEM41A-206ENST00000475480 TOM1O60784 492 aa23.43■■□□□ 1.34
TMEM41A-206ENST00000475480 KIF14Q15058 1648 aa23.43■■□□□ 1.34
TMEM41A-206ENST00000475480 ARHGAP5Q13017 1502 aa23.41■■□□□ 1.34
TMEM41A-206ENST00000475480 CEP170BQ9Y4F5 1589 aaPredicted RBP23.4■■□□□ 1.34
TMEM41A-206ENST00000475480 PPP6R1Q9UPN7 881 aa23.4■■□□□ 1.34
TMEM41A-206ENST00000475480 ALKQ9UM73 1620 aa23.4■■□□□ 1.34
TMEM41A-206ENST00000475480 KIDINS220Q9ULH0 1771 aa23.39■■□□□ 1.33
TMEM41A-206ENST00000475480 ZMYM3Q14202 1370 aa23.38■■□□□ 1.33
TMEM41A-206ENST00000475480 CDC42BPBQ9Y5S2 1711 aa23.37■■□□□ 1.33
TMEM41A-206ENST00000475480 CLTCQ00610 1675 aaKnown RBP23.36■■□□□ 1.33
TMEM41A-206ENST00000475480 CPS1P31327 1500 aa23.36■■□□□ 1.33
TMEM41A-206ENST00000475480 RGS17Q9UGC6 210 aaPredicted RBP23.34■■□□□ 1.33
TMEM41A-206ENST00000475480 POLR1AO95602 1720 aaPredicted RBP23.33■■□□□ 1.33
TMEM41A-206ENST00000475480 ITSN2Q9NZM3 1697 aa23.33■■□□□ 1.33
TMEM41A-206ENST00000475480 SHANK2Q9UPX8 1470 aa23.3■■□□□ 1.32
TMEM41A-206ENST00000475480 ABCC1P33527 1531 aa23.28■■□□□ 1.32
TMEM41A-206ENST00000475480 NEURL4Q96JN8 1562 aa23.28■■□□□ 1.32
TMEM41A-206ENST00000475480 PTPRKQ15262 1439 aa23.28■■□□□ 1.32
TMEM41A-206ENST00000475480 DNMT1P26358 1616 aaKnown RBP23.26■■□□□ 1.31
TMEM41A-206ENST00000475480 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
TMEM41A-206ENST00000475480 CSRNP3Q8WYN3 585 aa23.24■■□□□ 1.31
TMEM41A-206ENST00000475480 PREX2Q70Z35 1606 aa23.23■■□□□ 1.31
TMEM41A-206ENST00000475480 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
TMEM41A-206ENST00000475480 TROQ12816 1431 aaPredicted RBP23.21■■□□□ 1.31
TMEM41A-206ENST00000475480 A2ML1A8K2U0 1454 aa23.2■■□□□ 1.3
TMEM41A-206ENST00000475480 LRRIQ1Q96JM4 1722 aa23.19■■□□□ 1.3
TMEM41A-206ENST00000475480 CDK11AQ9UQ88 783 aaPredicted RBP23.18■■□□□ 1.3
TMEM41A-206ENST00000475480 ATP1B4Q9UN42 357 aaPredicted RBP23.17■■□□□ 1.3
TMEM41A-206ENST00000475480 SAMD9LQ8IVG5 1584 aa23.17■■□□□ 1.3
TMEM41A-206ENST00000475480 SETD1AO15047 1707 aaKnown RBP23.16■■□□□ 1.3
TMEM41A-206ENST00000475480 STRCP1A6NGW2 1772 aa23.16■■□□□ 1.3
TMEM41A-206ENST00000475480 POTEAQ6S8J7 498 aa23.14■■□□□ 1.29
TMEM41A-206ENST00000475480 CLIP1P30622 1438 aa23.13■■□□□ 1.29
TMEM41A-206ENST00000475480 PLXNC1O60486 1568 aa23.13■■□□□ 1.29
TMEM41A-206ENST00000475480 CDC42BPAQ5VT25 1732 aa23.12■■□□□ 1.29
TMEM41A-206ENST00000475480 RNF17Q9BXT8 1623 aaKnown RBP23.11■■□□□ 1.29
TMEM41A-206ENST00000475480 LRRC7Q96NW7 1537 aa23.07■■□□□ 1.28
TMEM41A-206ENST00000475480 GGT6Q6P531 493 aa23.06■■□□□ 1.28
TMEM41A-206ENST00000475480 FMN1Q68DA7 1419 aa23.06■■□□□ 1.28
TMEM41A-206ENST00000475480 ATP7AQ04656 1500 aa23.05■■□□□ 1.28
TMEM41A-206ENST00000475480 A2MP01023 1474 aa23.04■■□□□ 1.28
TMEM41A-206ENST00000475480 DEPDC5O75140 1603 aa23.04■■□□□ 1.28
TMEM41A-206ENST00000475480 SYNMO15061 1565 aa23.03■■□□□ 1.28
TMEM41A-206ENST00000475480 INO80Q9ULG1 1556 aaPredicted RBP23.03■■□□□ 1.28
TMEM41A-206ENST00000475480 MED14O60244 1454 aa23.03■■□□□ 1.28
TMEM41A-206ENST00000475480 SPAG9O60271 1321 aaKnown RBP23.03■■□□□ 1.28
TMEM41A-206ENST00000475480 SYCP2Q9BX26 1530 aa23.03■■□□□ 1.28
TMEM41A-206ENST00000475480 IQGAP1P46940 1657 aa23.02■■□□□ 1.28
TMEM41A-206ENST00000475480 NPHP4O75161 1426 aaPredicted RBP23.01■■□□□ 1.27
TMEM41A-206ENST00000475480 ANKLE2Q86XL3 938 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms