RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 PREX1Q8TCU6 1659 aa30.35■■■□□ 2.45
RNF220-212ENST00000475378 PLCH2O75038 1416 aa30.34■■■□□ 2.45
RNF220-212ENST00000475378 EEA1Q15075 1411 aa30.34■■■□□ 2.45
RNF220-212ENST00000475378 SCAPERQ9BY12 1400 aa30.34■■■□□ 2.45
RNF220-212ENST00000475378 MLECQ14165 292 aa30.34■■■□□ 2.45
RNF220-212ENST00000475378 ATP10AO60312 1499 aa30.3■■■□□ 2.44
RNF220-212ENST00000475378 C9orf84Q5VXU9 1444 aa30.28■■■□□ 2.44
RNF220-212ENST00000475378 MYO5CQ9NQX4 1742 aa30.27■■■□□ 2.44
RNF220-212ENST00000475378 STRCQ7RTU9 1775 aa30.27■■■□□ 2.44
RNF220-212ENST00000475378 SETD1BQ9UPS6 1966 aaKnown RBP30.22■■■□□ 2.43
RNF220-212ENST00000475378 CEBPAP49715 358 aaPredicted RBP30.18■■■□□ 2.42
RNF220-212ENST00000475378 KDM5CP41229 1560 aa30.16■■■□□ 2.42
RNF220-212ENST00000475378 KIF14Q15058 1648 aa30.16■■■□□ 2.42
RNF220-212ENST00000475378 EFCAB2Q5VUJ9 269 aa30.16■■■□□ 2.42
RNF220-212ENST00000475378 ZNF518AQ6AHZ1 1483 aa30.14■■■□□ 2.42
RNF220-212ENST00000475378 DMRT2Q9Y5R5 561 aa30.1■■■□□ 2.41
RNF220-212ENST00000475378 UHRF1BP1Q6BDS2 1440 aa30.1■■■□□ 2.41
RNF220-212ENST00000475378 REREQ9P2R6 1566 aa30.1■■■□□ 2.41
RNF220-212ENST00000475378 DIP2CQ9Y2E4 1556 aa30.1■■■□□ 2.41
RNF220-212ENST00000475378 ILDR2Q71H61 639 aa30.09■■■□□ 2.41
RNF220-212ENST00000475378 C3P01024 1663 aa30.07■■■□□ 2.41
RNF220-212ENST00000475378 FMN1Q68DA7 1419 aa30.07■■■□□ 2.4
RNF220-212ENST00000475378 DISP3Q9P2K9 1392 aa30.06■■■□□ 2.4
RNF220-212ENST00000475378 AFAP1Q8N556 730 aa30.06■■■□□ 2.4
RNF220-212ENST00000475378 ARHGAP5Q13017 1502 aa30.06■■■□□ 2.4
RNF220-212ENST00000475378 LRRIQ1Q96JM4 1722 aa30.05■■■□□ 2.4
RNF220-212ENST00000475378 ABCA6Q8N139 1617 aa30.04■■■□□ 2.4
RNF220-212ENST00000475378 CDC42BPBQ9Y5S2 1711 aa30.04■■■□□ 2.4
RNF220-212ENST00000475378 TROQ12816 1431 aaPredicted RBP30.04■■■□□ 2.4
RNF220-212ENST00000475378 ARHGAP35Q9NRY4 1499 aa30.03■■■□□ 2.4
RNF220-212ENST00000475378 CDK11AQ9UQ88 783 aaPredicted RBP30.02■■■□□ 2.4
RNF220-212ENST00000475378 ATP1B4Q9UN42 357 aaPredicted RBP30.01■■■□□ 2.39
RNF220-212ENST00000475378 PTPRTO14522 1441 aa30.01■■■□□ 2.39
RNF220-212ENST00000475378 MLH3Q9UHC1 1453 aa29.99■■■□□ 2.39
RNF220-212ENST00000475378 SOCS7O14512 581 aa29.98■■■□□ 2.39
RNF220-212ENST00000475378 AGLP35573 1532 aa29.97■■■□□ 2.39
RNF220-212ENST00000475378 LTBP4Q8N2S1 1624 aa29.96■■■□□ 2.39
RNF220-212ENST00000475378 CLIP1P30622 1438 aa29.94■■■□□ 2.38
RNF220-212ENST00000475378 SPATA31D1Q6ZQQ2 1576 aa29.94■■■□□ 2.38
RNF220-212ENST00000475378 PREX2Q70Z35 1606 aa29.93■■■□□ 2.38
RNF220-212ENST00000475378 ABCC1P33527 1531 aa29.92■■■□□ 2.38
RNF220-212ENST00000475378 ITSN2Q9NZM3 1697 aa29.92■■■□□ 2.38
RNF220-212ENST00000475378 KIDINS220Q9ULH0 1771 aa29.9■■■□□ 2.38
RNF220-212ENST00000475378 TRAPPC8Q9Y2L5 1435 aa29.9■■■□□ 2.38
RNF220-212ENST00000475378 MYT1LQ9UL68 1186 aa29.9■■■□□ 2.38
RNF220-212ENST00000475378 UBTFP17480 764 aaKnown RBP29.88■■■□□ 2.37
RNF220-212ENST00000475378 IQSEC2Q5JU85 1478 aa29.87■■■□□ 2.37
RNF220-212ENST00000475378 NCOA1Q15788 1441 aa29.87■■■□□ 2.37
RNF220-212ENST00000475378 CDC42BPAQ5VT25 1732 aa29.83■■■□□ 2.37
RNF220-212ENST00000475378 EHMT2Q96KQ7 1210 aa29.83■■■□□ 2.37
RNF220-212ENST00000475378 CNTLNQ9NXG0 1405 aa29.82■■■□□ 2.36
RNF220-212ENST00000475378 MROH2AA6NES4 1674 aa29.82■■■□□ 2.36
RNF220-212ENST00000475378 ESF1Q9H501 851 aaKnown RBP29.8■■■□□ 2.36
RNF220-212ENST00000475378 CAMSAP1Q5T5Y3 1602 aa29.78■■■□□ 2.36
RNF220-212ENST00000475378 NPATQ14207 1427 aa29.76■■■□□ 2.35
RNF220-212ENST00000475378 CCDC18Q5T9S5 1454 aa29.74■■■□□ 2.35
RNF220-212ENST00000475378 SAMD9LQ8IVG5 1584 aa29.74■■■□□ 2.35
RNF220-212ENST00000475378 CASKIN1Q8WXD9 1431 aa29.71■■■□□ 2.35
RNF220-212ENST00000475378 SUPT6HQ7KZ85 1726 aaKnown RBP29.69■■■□□ 2.34
RNF220-212ENST00000475378 ZNF142P52746 1687 aaPredicted RBP29.69■■■□□ 2.34
RNF220-212ENST00000475378 ZMYM3Q14202 1370 aa29.68■■■□□ 2.34
RNF220-212ENST00000475378 CLTCQ00610 1675 aaKnown RBP29.66■■■□□ 2.34
RNF220-212ENST00000475378 MYO3AQ8NEV4 1616 aa29.65■■■□□ 2.34
RNF220-212ENST00000475378 SYCP2Q9BX26 1530 aa29.65■■■□□ 2.34
RNF220-212ENST00000475378 PLXNC1O60486 1568 aa29.63■■■□□ 2.33
RNF220-212ENST00000475378 ZNF335Q9H4Z2 1342 aaPredicted RBP29.62■■■□□ 2.33
RNF220-212ENST00000475378 NCKAP5LQ9HCH0 1330 aa29.62■■■□□ 2.33
RNF220-212ENST00000475378 PLA2R1Q13018 1463 aa29.61■■■□□ 2.33
RNF220-212ENST00000475378 INO80Q9ULG1 1556 aaPredicted RBP29.6■■■□□ 2.33
RNF220-212ENST00000475378 ATP7AQ04656 1500 aa29.59■■■□□ 2.33
RNF220-212ENST00000475378 GPATCH8Q9UKJ3 1502 aaKnown RBP29.59■■■□□ 2.33
RNF220-212ENST00000475378 TCOF1Q13428 1488 aaKnown RBP29.58■■■□□ 2.33
RNF220-212ENST00000475378 CEP170BQ9Y4F5 1589 aaPredicted RBP29.58■■■□□ 2.33
RNF220-212ENST00000475378 SPAG9O60271 1321 aaKnown RBP29.57■■■□□ 2.32
RNF220-212ENST00000475378 FYCO1Q9BQS8 1478 aa29.56■■■□□ 2.32
RNF220-212ENST00000475378 PTPRKQ15262 1439 aa29.56■■■□□ 2.32
RNF220-212ENST00000475378 ZNF777Q9ULD5 760 aaPredicted RBP29.55■■■□□ 2.32
RNF220-212ENST00000475378 HNRNPMP52272 730 aaKnown RBP eCLIP29.54■■■□□ 2.32
RNF220-212ENST00000475378 PKD2Q13563 968 aa29.54■■■□□ 2.32
RNF220-212ENST00000475378 UBAP1LF5GYI3 381 aa29.53■■■□□ 2.32
RNF220-212ENST00000475378 A2MP01023 1474 aa29.53■■■□□ 2.32
RNF220-212ENST00000475378 KIAA1107Q9UPP5 1409 aa29.53■■■□□ 2.32
RNF220-212ENST00000475378 PLEKHH2Q8IVE3 1493 aa29.48■■■□□ 2.31
RNF220-212ENST00000475378 ADGBQ8N7X0 1667 aa29.47■■■□□ 2.31
RNF220-212ENST00000475378 DNMT1P26358 1616 aaKnown RBP29.44■■■□□ 2.3
RNF220-212ENST00000475378 CHIC1Q5VXU3 224 aa29.43■■■□□ 2.3
RNF220-212ENST00000475378 GGT6Q6P531 493 aa29.42■■■□□ 2.3
RNF220-212ENST00000475378 A2ML1A8K2U0 1454 aa29.42■■■□□ 2.3
RNF220-212ENST00000475378 CFDP1Q9UEE9 299 aaPredicted RBP29.41■■■□□ 2.3
RNF220-212ENST00000475378 PPP6R1Q9UPN7 881 aa29.41■■■□□ 2.3
RNF220-212ENST00000475378 POLR1AO95602 1720 aaPredicted RBP29.4■■■□□ 2.3
RNF220-212ENST00000475378 CCNB3Q8WWL7 1395 aa29.37■■■□□ 2.29
RNF220-212ENST00000475378 NEURL4Q96JN8 1562 aa29.35■■■□□ 2.29
RNF220-212ENST00000475378 MED1Q15648 1581 aaPredicted RBP29.34■■■□□ 2.29
RNF220-212ENST00000475378 MBD5Q9P267 1494 aa29.32■■■□□ 2.28
RNF220-212ENST00000475378 TIAM1Q13009 1591 aa29.31■■■□□ 2.28
RNF220-212ENST00000475378 CPS1P31327 1500 aa29.31■■■□□ 2.28
RNF220-212ENST00000475378 HSPA1LP34931 641 aa29.3■■■□□ 2.28
RNF220-212ENST00000475378 RTEL1-TNFRSF6BF6WH68 1400 aa29.28■■■□□ 2.28
RNF220-212ENST00000475378 ZNF644Q9H582 1327 aaPredicted RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms