RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 ERICH6BQ5W0A0 696 aa12.55□□□□□ -0.4
CDH23-211ENST00000475158 JPH4Q96JJ6 628 aa12.55□□□□□ -0.4
CDH23-211ENST00000475158 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
CDH23-211ENST00000475158 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
CDH23-211ENST00000475158 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
CDH23-211ENST00000475158 TPRNQ4KMQ1 711 aa12.54□□□□□ -0.4
CDH23-211ENST00000475158 IGF1RP08069 1367 aa12.53□□□□□ -0.4
CDH23-211ENST00000475158 MAPK8IP3Q9UPT6 1336 aa12.52□□□□□ -0.4
CDH23-211ENST00000475158 MYH16Q9H6N6 1097 aa12.52□□□□□ -0.4
CDH23-211ENST00000475158 ST20-MTHFSA0A0A6YYL1 179 aa12.52□□□□□ -0.4
CDH23-211ENST00000475158 KIF3BO15066 747 aa12.52□□□□□ -0.4
CDH23-211ENST00000475158 ROCK2O75116 1388 aaKnown RBP12.52□□□□□ -0.41
CDH23-211ENST00000475158 RAD54L2Q9Y4B4 1467 aa12.51□□□□□ -0.41
CDH23-211ENST00000475158 VSIG10Q8N0Z9 540 aa12.51□□□□□ -0.41
CDH23-211ENST00000475158 MORC1Q86VD1 984 aa12.5□□□□□ -0.41
CDH23-211ENST00000475158 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
CDH23-211ENST00000475158 CCDC146Q8IYE0 955 aa12.48□□□□□ -0.41
CDH23-211ENST00000475158 ANP32BQ92688 251 aaKnown RBP12.48□□□□□ -0.41
CDH23-211ENST00000475158 CARMIL2Q6F5E8 1435 aa12.48□□□□□ -0.41
CDH23-211ENST00000475158 EFCAB2Q5VUJ9 269 aa12.47□□□□□ -0.41
CDH23-211ENST00000475158 NUDCQ9Y266 331 aa12.47□□□□□ -0.41
CDH23-211ENST00000475158 PHLDB1Q86UU1 1377 aa12.47□□□□□ -0.41
CDH23-211ENST00000475158 ANKRD30AQ9BXX3 1397 aa12.47□□□□□ -0.41
CDH23-211ENST00000475158 RCAN3Q9UKA8 241 aa12.47□□□□□ -0.41
CDH23-211ENST00000475158 SPRYD3Q8NCJ5 442 aa12.47□□□□□ -0.41
CDH23-211ENST00000475158 KTN1Q86UP2 1357 aaKnown RBP12.45□□□□□ -0.42
CDH23-211ENST00000475158 FGD5Q6ZNL6 1462 aa12.45□□□□□ -0.42
CDH23-211ENST00000475158 U2AF1L5P0DN76 240 aaPredicted RBP12.45□□□□□ -0.42
CDH23-211ENST00000475158 U2AF1Q01081 240 aaKnown RBP eCLIP12.45□□□□□ -0.42
CDH23-211ENST00000475158 CLUAP1Q96AJ1 413 aa12.44□□□□□ -0.42
CDH23-211ENST00000475158 PRKRIP1Q9H875 184 aaPredicted RBP12.44□□□□□ -0.42
CDH23-211ENST00000475158 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
CDH23-211ENST00000475158 BECN1Q14457 450 aa12.43□□□□□ -0.42
CDH23-211ENST00000475158 PKNOX2Q96KN3 472 aa12.43□□□□□ -0.42
CDH23-211ENST00000475158 APBB1O00213 710 aa12.43□□□□□ -0.42
CDH23-211ENST00000475158 PLIN1O60240 522 aa12.43□□□□□ -0.42
CDH23-211ENST00000475158 DDRGK1Q96HY6 314 aa12.43□□□□□ -0.42
CDH23-211ENST00000475158 TRAK1Q9UPV9 953 aa12.43□□□□□ -0.42
CDH23-211ENST00000475158 NCLP19338 710 aaKnown RBP12.42□□□□□ -0.42
CDH23-211ENST00000475158 KANK1Q14678 1352 aa12.42□□□□□ -0.42
CDH23-211ENST00000475158 RRP7AQ9Y3A4 280 aaKnown RBP12.41□□□□□ -0.42
CDH23-211ENST00000475158 KIF21BO75037 1637 aa12.41□□□□□ -0.42
CDH23-211ENST00000475158 ARAP1Q96P48 1450 aa12.41□□□□□ -0.42
CDH23-211ENST00000475158 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.42
CDH23-211ENST00000475158 IL27Q8NEV9 243 aa12.4□□□□□ -0.42
CDH23-211ENST00000475158 PANK3Q9H999 370 aa12.4□□□□□ -0.42
CDH23-211ENST00000475158 SPAG9O60271 1321 aaKnown RBP12.4□□□□□ -0.42
CDH23-211ENST00000475158 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
CDH23-211ENST00000475158 TRHP20396 242 aaPredicted RBP12.39□□□□□ -0.43
CDH23-211ENST00000475158 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
CDH23-211ENST00000475158 NLRP13Q86W25 1043 aa12.38□□□□□ -0.43
CDH23-211ENST00000475158 BCL2L13Q9BXK5 485 aa12.38□□□□□ -0.43
CDH23-211ENST00000475158 RALBP1Q15311 655 aa12.37□□□□□ -0.43
CDH23-211ENST00000475158 AQRO60306 1485 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDH23-211ENST00000475158 HAP1P54257 671 aaPredicted RBP12.37□□□□□ -0.43
CDH23-211ENST00000475158 SYNJ1O43426 1573 aa12.36□□□□□ -0.43
CDH23-211ENST00000475158 TRIM44Q96DX7 344 aaPredicted RBP12.35□□□□□ -0.43
CDH23-211ENST00000475158 SLKQ9H2G2 1235 aaPredicted RBP12.35□□□□□ -0.43
CDH23-211ENST00000475158 A0A0U1RQG5 324 aaPredicted RBP12.35□□□□□ -0.43
CDH23-211ENST00000475158 DNAJC5BQ9UF47 199 aa12.35□□□□□ -0.43
CDH23-211ENST00000475158 WASHC2CQ9Y4E1 1318 aa12.34□□□□□ -0.43
CDH23-211ENST00000475158 PODXL2Q9NZ53 605 aa12.34□□□□□ -0.43
CDH23-211ENST00000475158 USP47Q96K76 1375 aa12.34□□□□□ -0.43
CDH23-211ENST00000475158 GAPVD1Q14C86 1478 aa12.34□□□□□ -0.43
CDH23-211ENST00000475158 FGD6Q6ZV73 1430 aa12.33□□□□□ -0.44
CDH23-211ENST00000475158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDH23-211ENST00000475158 NESP48681 1621 aa12.33□□□□□ -0.44
CDH23-211ENST00000475158 EXOC6Q8TAG9 804 aa12.33□□□□□ -0.44
CDH23-211ENST00000475158 ELL2O00472 640 aaPredicted RBP12.32□□□□□ -0.44
CDH23-211ENST00000475158 GOLGA2Q08379 1002 aa12.32□□□□□ -0.44
CDH23-211ENST00000475158 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
CDH23-211ENST00000475158 PTPRGP23470 1445 aa12.31□□□□□ -0.44
CDH23-211ENST00000475158 ITPRIPQ8IWB1 547 aa12.31□□□□□ -0.44
CDH23-211ENST00000475158 WASHC2AQ641Q2 1341 aa12.31□□□□□ -0.44
CDH23-211ENST00000475158 SLC4A3P48751 1232 aa12.31□□□□□ -0.44
CDH23-211ENST00000475158 KIF7Q2M1P5 1343 aa12.31□□□□□ -0.44
CDH23-211ENST00000475158 CCDC144AA2RUR9 1427 aa12.31□□□□□ -0.44
CDH23-211ENST00000475158 ARID3AQ99856 593 aa12.3□□□□□ -0.44
CDH23-211ENST00000475158 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
CDH23-211ENST00000475158 HSP90AA2PQ14568 343 aaPredicted RBP12.3□□□□□ -0.44
CDH23-211ENST00000475158 FANCIQ9NVI1 1328 aa12.3□□□□□ -0.44
CDH23-211ENST00000475158 APAF1O14727 1248 aa12.29□□□□□ -0.44
CDH23-211ENST00000475158 HDGFL2Q7Z4V5 671 aaPredicted RBP12.29□□□□□ -0.44
CDH23-211ENST00000475158 HSP90AB1P08238 724 aaKnown RBP12.28□□□□□ -0.44
CDH23-211ENST00000475158 PNNQ9H307 717 aaKnown RBP12.28□□□□□ -0.44
CDH23-211ENST00000475158 OS9Q13438 667 aaPredicted RBP12.28□□□□□ -0.44
CDH23-211ENST00000475158 CYB5RLQ6IPT4 315 aa12.28□□□□□ -0.44
CDH23-211ENST00000475158 IPO9Q96P70 1041 aaKnown RBP12.28□□□□□ -0.44
CDH23-211ENST00000475158 SMC4Q9NTJ3 1288 aa12.28□□□□□ -0.44
CDH23-211ENST00000475158 MYBBP1AQ9BQG0 1328 aaKnown RBP12.27□□□□□ -0.44
CDH23-211ENST00000475158 GOLGA6L22H0YM25 854 aa12.27□□□□□ -0.44
CDH23-211ENST00000475158 CCDC184Q52MB2 194 aa12.27□□□□□ -0.44
CDH23-211ENST00000475158 NCAPD3P42695 1498 aa12.27□□□□□ -0.44
CDH23-211ENST00000475158 GZF1Q9H116 711 aaPredicted RBP12.27□□□□□ -0.45
CDH23-211ENST00000475158 MYOM3Q5VTT5 1437 aa12.27□□□□□ -0.45
CDH23-211ENST00000475158 RSPH6AQ9H0K4 717 aa12.27□□□□□ -0.45
CDH23-211ENST00000475158 PLCB2Q00722 1185 aa12.26□□□□□ -0.45
CDH23-211ENST00000475158 TCERG1O14776 1098 aaKnown RBP12.26□□□□□ -0.45
CDH23-211ENST00000475158 AFAP1Q8N556 730 aa12.26□□□□□ -0.45
CDH23-211ENST00000475158 NBPF8Q3BBV2 869 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms