RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 PLCH2O75038 1416 aa24.99■■□□□ 1.59
PCCB-212ENST00000474833 EEA1Q15075 1411 aa24.98■■□□□ 1.59
PCCB-212ENST00000474833 SCAPERQ9BY12 1400 aa24.98■■□□□ 1.59
PCCB-212ENST00000474833 PREX1Q8TCU6 1659 aa24.97■■□□□ 1.59
PCCB-212ENST00000474833 MLECQ14165 292 aa24.95■■□□□ 1.58
PCCB-212ENST00000474833 ATP10AO60312 1499 aa24.94■■□□□ 1.58
PCCB-212ENST00000474833 C9orf84Q5VXU9 1444 aa24.94■■□□□ 1.58
PCCB-212ENST00000474833 STRCQ7RTU9 1775 aa24.9■■□□□ 1.58
PCCB-212ENST00000474833 MYO5CQ9NQX4 1742 aa24.9■■□□□ 1.58
PCCB-212ENST00000474833 KIF14Q15058 1648 aa24.88■■□□□ 1.57
PCCB-212ENST00000474833 KDM5CP41229 1560 aa24.88■■□□□ 1.57
PCCB-212ENST00000474833 CEBPAP49715 358 aaPredicted RBP24.84■■□□□ 1.57
PCCB-212ENST00000474833 ZNF518AQ6AHZ1 1483 aa24.83■■□□□ 1.56
PCCB-212ENST00000474833 DIP2CQ9Y2E4 1556 aa24.82■■□□□ 1.56
PCCB-212ENST00000474833 REREQ9P2R6 1566 aa24.8■■□□□ 1.56
PCCB-212ENST00000474833 EFCAB2Q5VUJ9 269 aa24.79■■□□□ 1.56
PCCB-212ENST00000474833 ILDR2Q71H61 639 aa24.78■■□□□ 1.56
PCCB-212ENST00000474833 ABCA6Q8N139 1617 aa24.78■■□□□ 1.56
PCCB-212ENST00000474833 FMN1Q68DA7 1419 aa24.77■■□□□ 1.56
PCCB-212ENST00000474833 UHRF1BP1Q6BDS2 1440 aa24.77■■□□□ 1.56
PCCB-212ENST00000474833 ARHGAP35Q9NRY4 1499 aa24.77■■□□□ 1.56
PCCB-212ENST00000474833 ARHGAP5Q13017 1502 aa24.76■■□□□ 1.55
PCCB-212ENST00000474833 LRRIQ1Q96JM4 1722 aa24.75■■□□□ 1.55
PCCB-212ENST00000474833 TROQ12816 1431 aaPredicted RBP24.75■■□□□ 1.55
PCCB-212ENST00000474833 C3P01024 1663 aa24.75■■□□□ 1.55
PCCB-212ENST00000474833 AFAP1Q8N556 730 aa24.74■■□□□ 1.55
PCCB-212ENST00000474833 DISP3Q9P2K9 1392 aa24.72■■□□□ 1.55
PCCB-212ENST00000474833 MLH3Q9UHC1 1453 aa24.71■■□□□ 1.55
PCCB-212ENST00000474833 CDC42BPBQ9Y5S2 1711 aa24.71■■□□□ 1.55
PCCB-212ENST00000474833 SETD1BQ9UPS6 1966 aaKnown RBP24.71■■□□□ 1.55
PCCB-212ENST00000474833 PTPRTO14522 1441 aa24.7■■□□□ 1.55
PCCB-212ENST00000474833 DMRT2Q9Y5R5 561 aa24.7■■□□□ 1.54
PCCB-212ENST00000474833 LTBP4Q8N2S1 1624 aa24.7■■□□□ 1.54
PCCB-212ENST00000474833 AGLP35573 1532 aa24.7■■□□□ 1.54
PCCB-212ENST00000474833 ABCC1P33527 1531 aa24.68■■□□□ 1.54
PCCB-212ENST00000474833 PREX2Q70Z35 1606 aa24.67■■□□□ 1.54
PCCB-212ENST00000474833 SPATA31D1Q6ZQQ2 1576 aa24.66■■□□□ 1.54
PCCB-212ENST00000474833 SOCS7O14512 581 aa24.65■■□□□ 1.54
PCCB-212ENST00000474833 CDK11AQ9UQ88 783 aaPredicted RBP24.65■■□□□ 1.54
PCCB-212ENST00000474833 TRAPPC8Q9Y2L5 1435 aa24.65■■□□□ 1.54
PCCB-212ENST00000474833 ATP1B4Q9UN42 357 aaPredicted RBP24.64■■□□□ 1.54
PCCB-212ENST00000474833 ITSN2Q9NZM3 1697 aa24.64■■□□□ 1.53
PCCB-212ENST00000474833 CLIP1P30622 1438 aa24.63■■□□□ 1.53
PCCB-212ENST00000474833 NCOA1Q15788 1441 aa24.62■■□□□ 1.53
PCCB-212ENST00000474833 KIDINS220Q9ULH0 1771 aa24.62■■□□□ 1.53
PCCB-212ENST00000474833 IQSEC2Q5JU85 1478 aa24.59■■□□□ 1.53
PCCB-212ENST00000474833 UBTFP17480 764 aaKnown RBP24.55■■□□□ 1.52
PCCB-212ENST00000474833 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
PCCB-212ENST00000474833 CNTLNQ9NXG0 1405 aa24.54■■□□□ 1.52
PCCB-212ENST00000474833 CDC42BPAQ5VT25 1732 aa24.54■■□□□ 1.52
PCCB-212ENST00000474833 MROH2AA6NES4 1674 aa24.53■■□□□ 1.52
PCCB-212ENST00000474833 MYT1LQ9UL68 1186 aa24.53■■□□□ 1.52
PCCB-212ENST00000474833 SAMD9LQ8IVG5 1584 aa24.52■■□□□ 1.52
PCCB-212ENST00000474833 CAMSAP1Q5T5Y3 1602 aa24.51■■□□□ 1.51
PCCB-212ENST00000474833 NPATQ14207 1427 aa24.51■■□□□ 1.51
PCCB-212ENST00000474833 CASKIN1Q8WXD9 1431 aa24.49■■□□□ 1.51
PCCB-212ENST00000474833 CCDC18Q5T9S5 1454 aa24.49■■□□□ 1.51
PCCB-212ENST00000474833 ESF1Q9H501 851 aaKnown RBP24.45■■□□□ 1.5
PCCB-212ENST00000474833 ZNF142P52746 1687 aaPredicted RBP24.45■■□□□ 1.5
PCCB-212ENST00000474833 PLXNC1O60486 1568 aa24.45■■□□□ 1.5
PCCB-212ENST00000474833 SYCP2Q9BX26 1530 aa24.45■■□□□ 1.5
PCCB-212ENST00000474833 MYO3AQ8NEV4 1616 aa24.44■■□□□ 1.5
PCCB-212ENST00000474833 INO80Q9ULG1 1556 aaPredicted RBP24.42■■□□□ 1.5
PCCB-212ENST00000474833 ZMYM3Q14202 1370 aa24.42■■□□□ 1.5
PCCB-212ENST00000474833 SUPT6HQ7KZ85 1726 aaKnown RBP24.41■■□□□ 1.5
PCCB-212ENST00000474833 CLTCQ00610 1675 aaKnown RBP24.4■■□□□ 1.5
PCCB-212ENST00000474833 PLA2R1Q13018 1463 aa24.39■■□□□ 1.5
PCCB-212ENST00000474833 TCOF1Q13428 1488 aaKnown RBP24.39■■□□□ 1.5
PCCB-212ENST00000474833 ZNF335Q9H4Z2 1342 aaPredicted RBP24.39■■□□□ 1.5
PCCB-212ENST00000474833 ATP7AQ04656 1500 aa24.39■■□□□ 1.49
PCCB-212ENST00000474833 GPATCH8Q9UKJ3 1502 aaKnown RBP24.39■■□□□ 1.49
PCCB-212ENST00000474833 CEP170BQ9Y4F5 1589 aaPredicted RBP24.38■■□□□ 1.49
PCCB-212ENST00000474833 FYCO1Q9BQS8 1478 aa24.38■■□□□ 1.49
PCCB-212ENST00000474833 NCKAP5LQ9HCH0 1330 aa24.37■■□□□ 1.49
PCCB-212ENST00000474833 PTPRKQ15262 1439 aa24.37■■□□□ 1.49
PCCB-212ENST00000474833 SPAG9O60271 1321 aaKnown RBP24.34■■□□□ 1.49
PCCB-212ENST00000474833 A2MP01023 1474 aa24.32■■□□□ 1.48
PCCB-212ENST00000474833 KIAA1107Q9UPP5 1409 aa24.32■■□□□ 1.48
PCCB-212ENST00000474833 HNRNPMP52272 730 aaKnown RBP eCLIP24.3■■□□□ 1.481e-7■■■□□ 18.3
PCCB-212ENST00000474833 ZNF777Q9ULD5 760 aaPredicted RBP24.3■■□□□ 1.48
PCCB-212ENST00000474833 UBAP1LF5GYI3 381 aa24.28■■□□□ 1.48
PCCB-212ENST00000474833 PKD2Q13563 968 aa24.28■■□□□ 1.48
PCCB-212ENST00000474833 PLEKHH2Q8IVE3 1493 aa24.26■■□□□ 1.47
PCCB-212ENST00000474833 ADGBQ8N7X0 1667 aa24.24■■□□□ 1.47
PCCB-212ENST00000474833 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
PCCB-212ENST00000474833 DNMT1P26358 1616 aaKnown RBP24.24■■□□□ 1.47
PCCB-212ENST00000474833 NEURL4Q96JN8 1562 aa24.22■■□□□ 1.47
PCCB-212ENST00000474833 A2ML1A8K2U0 1454 aa24.22■■□□□ 1.47
PCCB-212ENST00000474833 CFDP1Q9UEE9 299 aaPredicted RBP24.19■■□□□ 1.46
PCCB-212ENST00000474833 PPP6R1Q9UPN7 881 aa24.19■■□□□ 1.46
PCCB-212ENST00000474833 MBD5Q9P267 1494 aa24.19■■□□□ 1.46
PCCB-212ENST00000474833 GGT6Q6P531 493 aa24.18■■□□□ 1.46
PCCB-212ENST00000474833 POLR1AO95602 1720 aaPredicted RBP24.18■■□□□ 1.46
PCCB-212ENST00000474833 TIAM1Q13009 1591 aa24.17■■□□□ 1.46
PCCB-212ENST00000474833 MED1Q15648 1581 aaPredicted RBP24.17■■□□□ 1.46
PCCB-212ENST00000474833 CCNB3Q8WWL7 1395 aa24.16■■□□□ 1.46
PCCB-212ENST00000474833 ZNF644Q9H582 1327 aaPredicted RBP24.13■■□□□ 1.45
PCCB-212ENST00000474833 CPS1P31327 1500 aa24.13■■□□□ 1.45
PCCB-212ENST00000474833 ALKQ9UM73 1620 aa24.12■■□□□ 1.45
PCCB-212ENST00000474833 HSPA1LP34931 641 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms