RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 KIF7Q2M1P5 1343 aa25.11■■□□□ 1.61
ECHDC1-214ENST00000474289 GRIN2BQ13224 1484 aa25.1■■□□□ 1.61
ECHDC1-214ENST00000474289 POLR1AO95602 1720 aaPredicted RBP25.1■■□□□ 1.61
ECHDC1-214ENST00000474289 SAMD9Q5K651 1589 aa25.09■■□□□ 1.61
ECHDC1-214ENST00000474289 CHIC2Q9UKJ5 165 aa25.09■■□□□ 1.61
ECHDC1-214ENST00000474289 GCC2Q8IWJ2 1684 aa25.09■■□□□ 1.61
ECHDC1-214ENST00000474289 SUPT6HQ7KZ85 1726 aaKnown RBP25.09■■□□□ 1.61
ECHDC1-214ENST00000474289 NESP48681 1621 aa25.08■■□□□ 1.61
ECHDC1-214ENST00000474289 KDM6BO15054 1643 aa25.05■■□□□ 1.6
ECHDC1-214ENST00000474289 SPATA31E1Q6ZUB1 1445 aa25.05■■□□□ 1.6
ECHDC1-214ENST00000474289 EHBP1L1Q8N3D4 1523 aa25.04■■□□□ 1.6
ECHDC1-214ENST00000474289 NBPF8Q3BBV2 869 aa25.04■■□□□ 1.6
ECHDC1-214ENST00000474289 MAGI3Q5TCQ9 1506 aa25.03■■□□□ 1.6
ECHDC1-214ENST00000474289 NPM2Q86SE8 214 aaKnown RBP25.03■■□□□ 1.6
ECHDC1-214ENST00000474289 MPHOSPH9Q99550 1183 aa25.03■■□□□ 1.6
ECHDC1-214ENST00000474289 UGGT2Q9NYU1 1516 aa25.03■■□□□ 1.6
ECHDC1-214ENST00000474289 NEFMP07197 916 aa25.02■■□□□ 1.6
ECHDC1-214ENST00000474289 TDRD9Q8NDG6 1382 aaKnown RBP25.02■■□□□ 1.6
ECHDC1-214ENST00000474289 USP35Q9P2H5 1018 aa25.01■■□□□ 1.59
ECHDC1-214ENST00000474289 LAS1LQ9Y4W2 734 aaKnown RBP25.01■■□□□ 1.59
ECHDC1-214ENST00000474289 FOXD1Q16676 465 aa25■■□□□ 1.59
ECHDC1-214ENST00000474289 DHX29Q7Z478 1369 aaKnown RBP25■■□□□ 1.59
ECHDC1-214ENST00000474289 THOC2Q8NI27 1593 aaKnown RBP24.98■■□□□ 1.59
ECHDC1-214ENST00000474289 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
ECHDC1-214ENST00000474289 TEX14Q8IWB6 1497 aa24.97■■□□□ 1.59
ECHDC1-214ENST00000474289 SENP3-EIF4A1A0A087X0R7 540 aa24.96■■□□□ 1.59
ECHDC1-214ENST00000474289 WASHC2CQ9Y4E1 1318 aa24.96■■□□□ 1.59
ECHDC1-214ENST00000474289 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.96■■□□□ 1.59
ECHDC1-214ENST00000474289 CNGB1Q14028 1251 aaPredicted RBP24.95■■□□□ 1.59
ECHDC1-214ENST00000474289 RPRD2Q5VT52 1461 aaKnown RBP24.95■■□□□ 1.58
ECHDC1-214ENST00000474289 URB2Q14146 1524 aaKnown RBP24.94■■□□□ 1.58
ECHDC1-214ENST00000474289 TCOF1Q13428 1488 aaKnown RBP24.94■■□□□ 1.58
ECHDC1-214ENST00000474289 TCERG1O14776 1098 aaKnown RBP24.93■■□□□ 1.58
ECHDC1-214ENST00000474289 PDE4AP27815 886 aa24.91■■□□□ 1.58
ECHDC1-214ENST00000474289 ANKRD30BQ9BXX2 1392 aa24.91■■□□□ 1.58
ECHDC1-214ENST00000474289 GAPVD1Q14C86 1478 aa24.91■■□□□ 1.58
ECHDC1-214ENST00000474289 PNISRQ8TF01 805 aaKnown RBP24.88■■□□□ 1.57
ECHDC1-214ENST00000474289 BACH2Q9BYV9 841 aa24.88■■□□□ 1.57
ECHDC1-214ENST00000474289 PPM1GO15355 546 aaPredicted RBP24.87■■□□□ 1.57
ECHDC1-214ENST00000474289 MIA2Q96PC5 1412 aa24.87■■□□□ 1.57
ECHDC1-214ENST00000474289 EXOC6Q8TAG9 804 aa24.86■■□□□ 1.57
ECHDC1-214ENST00000474289 RRP1P56182 461 aaKnown RBP24.85■■□□□ 1.57
ECHDC1-214ENST00000474289 ARID3CA6NKF2 412 aa24.84■■□□□ 1.57
ECHDC1-214ENST00000474289 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
ECHDC1-214ENST00000474289 BCORL1Q5H9F3 1711 aa24.82■■□□□ 1.56
ECHDC1-214ENST00000474289 KIF21AQ7Z4S6 1674 aa24.82■■□□□ 1.56
ECHDC1-214ENST00000474289 POLR3GLQ9BT43 218 aa24.81■■□□□ 1.56
ECHDC1-214ENST00000474289 MS4A1P11836 297 aa24.81■■□□□ 1.56
ECHDC1-214ENST00000474289 CDK13Q14004 1512 aaKnown RBP24.8■■□□□ 1.56
ECHDC1-214ENST00000474289 TMC1Q8TDI8 760 aa24.8■■□□□ 1.56
ECHDC1-214ENST00000474289 BRPF3Q9ULD4 1205 aa24.8■■□□□ 1.56
ECHDC1-214ENST00000474289 EPRSP07814 1512 aaKnown RBP24.79■■□□□ 1.56
ECHDC1-214ENST00000474289 LRPPRCP42704 1394 aaKnown RBP24.76■■□□□ 1.55
ECHDC1-214ENST00000474289 UBE2Q2Q8WVN8 375 aa24.76■■□□□ 1.55
ECHDC1-214ENST00000474289 USP47Q96K76 1375 aa24.76■■□□□ 1.55
ECHDC1-214ENST00000474289 GSE1Q14687 1217 aa24.75■■□□□ 1.55
ECHDC1-214ENST00000474289 RCAN3Q9UKA8 241 aa24.74■■□□□ 1.55
ECHDC1-214ENST00000474289 SLC4A1APQ9BWU0 796 aaKnown RBP24.71■■□□□ 1.55
ECHDC1-214ENST00000474289 ARID4BQ4LE39 1312 aaPredicted RBP24.7■■□□□ 1.54
ECHDC1-214ENST00000474289 MBD5Q9P267 1494 aa24.7■■□□□ 1.54
ECHDC1-214ENST00000474289 DDRGK1Q96HY6 314 aa24.69■■□□□ 1.54
ECHDC1-214ENST00000474289 DAPK1P53355 1430 aa24.68■■□□□ 1.54
ECHDC1-214ENST00000474289 KDM5CP41229 1560 aa24.67■■□□□ 1.54
ECHDC1-214ENST00000474289 NFKBIBQ15653 356 aa24.67■■□□□ 1.54
ECHDC1-214ENST00000474289 ROCK1Q13464 1354 aa24.66■■□□□ 1.54
ECHDC1-214ENST00000474289 ZNF644Q9H582 1327 aaPredicted RBP24.66■■□□□ 1.54
ECHDC1-214ENST00000474289 WDR62O43379 1518 aa24.66■■□□□ 1.54
ECHDC1-214ENST00000474289 BRD4O60885 1362 aaPredicted RBP24.65■■□□□ 1.54
ECHDC1-214ENST00000474289 ROCK2O75116 1388 aaKnown RBP24.65■■□□□ 1.54
ECHDC1-214ENST00000474289 IQGAP2Q13576 1575 aa24.65■■□□□ 1.54
ECHDC1-214ENST00000474289 KIF15Q9NS87 1388 aa24.64■■□□□ 1.54
ECHDC1-214ENST00000474289 ABCC5O15440 1437 aa24.64■■□□□ 1.53
ECHDC1-214ENST00000474289 ZNF326Q5BKZ1 582 aaKnown RBP24.63■■□□□ 1.53
ECHDC1-214ENST00000474289 KIF14Q15058 1648 aa24.63■■□□□ 1.53
ECHDC1-214ENST00000474289 SKAP1Q86WV1 359 aa24.63■■□□□ 1.53
ECHDC1-214ENST00000474289 FRAT1Q92837 279 aaPredicted RBP24.63■■□□□ 1.53
ECHDC1-214ENST00000474289 TARBP1Q13395 1621 aaKnown RBP24.62■■□□□ 1.53
ECHDC1-214ENST00000474289 MYBBP1AQ9BQG0 1328 aaKnown RBP24.62■■□□□ 1.53
ECHDC1-214ENST00000474289 DNMT1P26358 1616 aaKnown RBP24.6■■□□□ 1.53
ECHDC1-214ENST00000474289 SLC4A3P48751 1232 aa24.57■■□□□ 1.52
ECHDC1-214ENST00000474289 PZPP20742 1482 aa24.57■■□□□ 1.52
ECHDC1-214ENST00000474289 EIF5BO60841 1220 aaKnown RBP24.57■■□□□ 1.52
ECHDC1-214ENST00000474289 PBRM1Q86U86 1689 aa24.57■■□□□ 1.52
ECHDC1-214ENST00000474289 PDE3BQ13370 1112 aa24.56■■□□□ 1.52
ECHDC1-214ENST00000474289 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
ECHDC1-214ENST00000474289 KTN1Q86UP2 1357 aaKnown RBP24.56■■□□□ 1.52
ECHDC1-214ENST00000474289 RALBP1Q15311 655 aa24.55■■□□□ 1.52
ECHDC1-214ENST00000474289 PLIN1O60240 522 aa24.54■■□□□ 1.52
ECHDC1-214ENST00000474289 CDCA7LQ96GN5 454 aa24.53■■□□□ 1.52
ECHDC1-214ENST00000474289 DNAJC5BQ9UF47 199 aa24.52■■□□□ 1.52
ECHDC1-214ENST00000474289 ADAMTS12P58397 1594 aa24.51■■□□□ 1.51
ECHDC1-214ENST00000474289 CRBNQ96SW2 442 aa24.51■■□□□ 1.51
ECHDC1-214ENST00000474289 RALGAPBQ86X10 1494 aa24.49■■□□□ 1.51
ECHDC1-214ENST00000474289 DAXXQ9UER7 740 aaPredicted RBP24.49■■□□□ 1.51
ECHDC1-214ENST00000474289 KIAA1107Q9UPP5 1409 aa24.48■■□□□ 1.51
ECHDC1-214ENST00000474289 E9PCH4 1651 aa24.48■■□□□ 1.51
ECHDC1-214ENST00000474289 CARD11Q9BXL7 1154 aa24.46■■□□□ 1.51
ECHDC1-214ENST00000474289 NLRP13Q86W25 1043 aa24.46■■□□□ 1.51
ECHDC1-214ENST00000474289 UHRF1BP1Q6BDS2 1440 aa24.46■■□□□ 1.51
ECHDC1-214ENST00000474289 NUP153P49790 1475 aaKnown RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms