RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 DENND4BO75064 1496 aaPredicted RBP8.75□□□□□ -1.01
SNRNP40-204ENST00000474025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-204ENST00000474025 SOCS7O14512 581 aa8.74□□□□□ -1.01
SNRNP40-204ENST00000474025 SLC4A2P04920 1241 aa8.74□□□□□ -1.01
SNRNP40-204ENST00000474025 HNRNPUL2Q1KMD3 747 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-204ENST00000474025 RIMS1Q86UR5 1692 aaKnown RBP8.74□□□□□ -1.01
SNRNP40-204ENST00000474025 ZMYM4Q5VZL5 1548 aa8.74□□□□□ -1.01
SNRNP40-204ENST00000474025 AKNAQ7Z591 1439 aa8.73□□□□□ -1.01
SNRNP40-204ENST00000474025 FANCAO15360 1455 aa8.73□□□□□ -1.01
SNRNP40-204ENST00000474025 CSRNP3Q8WYN3 585 aa8.73□□□□□ -1.01
SNRNP40-204ENST00000474025 CFAP74Q9C0B2 1584 aa8.73□□□□□ -1.01
SNRNP40-204ENST00000474025 SIGLEC1Q9BZZ2 1709 aa8.72□□□□□ -1.01
SNRNP40-204ENST00000474025 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.72□□□□□ -1.01
SNRNP40-204ENST00000474025 TTC37Q6PGP7 1564 aa8.72□□□□□ -1.01
SNRNP40-204ENST00000474025 YEATS2Q9ULM3 1422 aa8.71□□□□□ -1.01
SNRNP40-204ENST00000474025 ZFYVE16Q7Z3T8 1539 aa8.71□□□□□ -1.01
SNRNP40-204ENST00000474025 POGZQ7Z3K3 1410 aa8.71□□□□□ -1.02
SNRNP40-204ENST00000474025 EFCAB5A4FU69 1503 aa8.7□□□□□ -1.02
SNRNP40-204ENST00000474025 PLEKHD1A6NEE1 506 aa8.7□□□□□ -1.02
SNRNP40-204ENST00000474025 HSPA2P54652 639 aa8.7□□□□□ -1.02
SNRNP40-204ENST00000474025 MAGI2Q86UL8 1455 aa8.7□□□□□ -1.02
SNRNP40-204ENST00000474025 EEA1Q15075 1411 aa8.69□□□□□ -1.02
SNRNP40-204ENST00000474025 HECW1Q76N89 1606 aa8.69□□□□□ -1.02
SNRNP40-204ENST00000474025 RANGAP1P46060 587 aaPredicted RBP8.68□□□□□ -1.02
SNRNP40-204ENST00000474025 CDK13Q14004 1512 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-204ENST00000474025 FER1L4A9Z1Z3 1794 aa8.67□□□□□ -1.02
SNRNP40-204ENST00000474025 ARHGEF12Q9NZN5 1544 aa8.66□□□□□ -1.02
SNRNP40-204ENST00000474025 PLCH2O75038 1416 aa8.66□□□□□ -1.02
SNRNP40-204ENST00000474025 SCAPERQ9BY12 1400 aa8.66□□□□□ -1.02
SNRNP40-204ENST00000474025 DISP3Q9P2K9 1392 aa8.66□□□□□ -1.02
SNRNP40-204ENST00000474025 MLECQ14165 292 aa8.65□□□□□ -1.02
SNRNP40-204ENST00000474025 CERKQ8TCT0 537 aa8.65□□□□□ -1.02
SNRNP40-204ENST00000474025 C9orf84Q5VXU9 1444 aa8.64□□□□□ -1.03
SNRNP40-204ENST00000474025 ATP10AO60312 1499 aa8.64□□□□□ -1.03
SNRNP40-204ENST00000474025 PREX1Q8TCU6 1659 aa8.63□□□□□ -1.03
SNRNP40-204ENST00000474025 SPINK5Q9NQ38 1064 aaPredicted RBP8.63□□□□□ -1.03
SNRNP40-204ENST00000474025 ZNF518AQ6AHZ1 1483 aa8.62□□□□□ -1.03
SNRNP40-204ENST00000474025 KDM5CP41229 1560 aa8.61□□□□□ -1.03
SNRNP40-204ENST00000474025 MYO5CQ9NQX4 1742 aa8.61□□□□□ -1.03
SNRNP40-204ENST00000474025 CAPN15O75808 1086 aa8.61□□□□□ -1.03
SNRNP40-204ENST00000474025 EFCAB2Q5VUJ9 269 aa8.61□□□□□ -1.03
SNRNP40-204ENST00000474025 FMN1Q68DA7 1419 aa8.61□□□□□ -1.03
SNRNP40-204ENST00000474025 KIF14Q15058 1648 aa8.61□□□□□ -1.03
SNRNP40-204ENST00000474025 CEBPAP49715 358 aaPredicted RBP8.6□□□□□ -1.03
SNRNP40-204ENST00000474025 APLP2Q06481 763 aa8.6□□□□□ -1.03
SNRNP40-204ENST00000474025 STRCQ7RTU9 1775 aa8.6□□□□□ -1.03
SNRNP40-204ENST00000474025 DSG3P32926 999 aa8.59□□□□□ -1.03
SNRNP40-204ENST00000474025 TROQ12816 1431 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-204ENST00000474025 UHRF1BP1Q6BDS2 1440 aa8.59□□□□□ -1.03
SNRNP40-204ENST00000474025 REREQ9P2R6 1566 aa8.59□□□□□ -1.03
SNRNP40-204ENST00000474025 DIP2CQ9Y2E4 1556 aa8.59□□□□□ -1.03
SNRNP40-204ENST00000474025 ARHGAP5Q13017 1502 aa8.59□□□□□ -1.03
SNRNP40-204ENST00000474025 ARHGAP35Q9NRY4 1499 aa8.58□□□□□ -1.04
SNRNP40-204ENST00000474025 ILDR2Q71H61 639 aa8.58□□□□□ -1.04
SNRNP40-204ENST00000474025 AFAP1Q8N556 730 aa8.57□□□□□ -1.04
SNRNP40-204ENST00000474025 CDK11AQ9UQ88 783 aaPredicted RBP8.57□□□□□ -1.04
SNRNP40-204ENST00000474025 ABCA6Q8N139 1617 aa8.57□□□□□ -1.04
SNRNP40-204ENST00000474025 MLH3Q9UHC1 1453 aa8.57□□□□□ -1.04
SNRNP40-204ENST00000474025 CLIP1P30622 1438 aa8.56□□□□□ -1.04
SNRNP40-204ENST00000474025 ATP1B4Q9UN42 357 aaPredicted RBP8.56□□□□□ -1.04
SNRNP40-204ENST00000474025 C3P01024 1663 aa8.56□□□□□ -1.04
SNRNP40-204ENST00000474025 SETD1BQ9UPS6 1966 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-204ENST00000474025 PTPRTO14522 1441 aa8.55□□□□□ -1.04
SNRNP40-204ENST00000474025 ABCC1P33527 1531 aa8.55□□□□□ -1.04
SNRNP40-204ENST00000474025 AGLP35573 1532 aa8.55□□□□□ -1.04
SNRNP40-204ENST00000474025 TRAPPC8Q9Y2L5 1435 aa8.54□□□□□ -1.04
SNRNP40-204ENST00000474025 LRRIQ1Q96JM4 1722 aa8.54□□□□□ -1.04
SNRNP40-204ENST00000474025 CDC42BPBQ9Y5S2 1711 aa8.54□□□□□ -1.04
SNRNP40-204ENST00000474025 UBTFP17480 764 aaKnown RBP8.54□□□□□ -1.04
SNRNP40-204ENST00000474025 SAMD1Q6SPF0 538 aaPredicted RBP8.54□□□□□ -1.04
SNRNP40-204ENST00000474025 PREX2Q70Z35 1606 aa8.54□□□□□ -1.04
SNRNP40-204ENST00000474025 LTBP4Q8N2S1 1624 aa8.54□□□□□ -1.04
SNRNP40-204ENST00000474025 EHMT2Q96KQ7 1210 aa8.53□□□□□ -1.04
SNRNP40-204ENST00000474025 NCOA1Q15788 1441 aa8.53□□□□□ -1.04
SNRNP40-204ENST00000474025 SPATA31D1Q6ZQQ2 1576 aa8.52□□□□□ -1.04
SNRNP40-204ENST00000474025 ZNF219Q9P2Y4 722 aaPredicted RBP8.52□□□□□ -1.05
SNRNP40-204ENST00000474025 MYT1LQ9UL68 1186 aa8.52□□□□□ -1.05
SNRNP40-204ENST00000474025 CNTLNQ9NXG0 1405 aa8.52□□□□□ -1.05
SNRNP40-204ENST00000474025 ITSN2Q9NZM3 1697 aa8.52□□□□□ -1.05
SNRNP40-204ENST00000474025 KIDINS220Q9ULH0 1771 aa8.51□□□□□ -1.05
SNRNP40-204ENST00000474025 IQSEC2Q5JU85 1478 aa8.51□□□□□ -1.05
SNRNP40-204ENST00000474025 CCDC18Q5T9S5 1454 aa8.51□□□□□ -1.05
SNRNP40-204ENST00000474025 NPATQ14207 1427 aa8.5□□□□□ -1.05
SNRNP40-204ENST00000474025 CASKIN1Q8WXD9 1431 aa8.5□□□□□ -1.05
SNRNP40-204ENST00000474025 SLC4A1APQ9BWU0 796 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-204ENST00000474025 ESF1Q9H501 851 aaKnown RBP8.5□□□□□ -1.05
SNRNP40-204ENST00000474025 SAMD9LQ8IVG5 1584 aa8.49□□□□□ -1.05
SNRNP40-204ENST00000474025 MROH2AA6NES4 1674 aa8.49□□□□□ -1.05
SNRNP40-204ENST00000474025 CDC42BPAQ5VT25 1732 aa8.49□□□□□ -1.05
SNRNP40-204ENST00000474025 CAMSAP1Q5T5Y3 1602 aa8.48□□□□□ -1.05
SNRNP40-204ENST00000474025 MYCNP04198 464 aaPredicted RBP8.48□□□□□ -1.05
SNRNP40-204ENST00000474025 SYCP2Q9BX26 1530 aa8.48□□□□□ -1.05
SNRNP40-204ENST00000474025 PLXNC1O60486 1568 aa8.47□□□□□ -1.05
SNRNP40-204ENST00000474025 ZMYM3Q14202 1370 aa8.47□□□□□ -1.05
SNRNP40-204ENST00000474025 FYCO1Q9BQS8 1478 aa8.46□□□□□ -1.05
SNRNP40-204ENST00000474025 ZNF142P52746 1687 aaPredicted RBP8.46□□□□□ -1.06
SNRNP40-204ENST00000474025 PLA2R1Q13018 1463 aa8.45□□□□□ -1.06
SNRNP40-204ENST00000474025 GPATCH8Q9UKJ3 1502 aaKnown RBP8.45□□□□□ -1.06
SNRNP40-204ENST00000474025 INO80Q9ULG1 1556 aaPredicted RBP8.45□□□□□ -1.06
SNRNP40-204ENST00000474025 MYO3AQ8NEV4 1616 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms