RNA–Protein interactions for RNA: ENST00000473381.1

UBASH3A-204, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 2

Gene UBASH3A, Length 2,754 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-204ENST00000473381 CHMP7Q8WUX9 453 aaPredicted RBP18.49■□□□□ 0.55
UBASH3A-204ENST00000473381 FOXD1Q16676 465 aa18.48■□□□□ 0.55
UBASH3A-204ENST00000473381 CEP170Q5SW79 1584 aa18.48■□□□□ 0.55
UBASH3A-204ENST00000473381 SYNJ2O15056 1496 aa18.47■□□□□ 0.55
UBASH3A-204ENST00000473381 PRG4Q92954 1404 aaPredicted RBP18.47■□□□□ 0.55
UBASH3A-204ENST00000473381 HSPA5P11021 654 aaKnown RBP18.47■□□□□ 0.55
UBASH3A-204ENST00000473381 TROQ12816 1431 aaPredicted RBP18.46■□□□□ 0.55
UBASH3A-204ENST00000473381 PLB1Q6P1J6 1458 aa18.45■□□□□ 0.54
UBASH3A-204ENST00000473381 L3MBTL2Q969R5 705 aa18.45■□□□□ 0.54
UBASH3A-204ENST00000473381 FBLN2P98095 1184 aa18.44■□□□□ 0.54
UBASH3A-204ENST00000473381 ANKRD30BQ9BXX2 1392 aa18.43■□□□□ 0.54
UBASH3A-204ENST00000473381 WASHC2AQ641Q2 1341 aa18.42■□□□□ 0.54
UBASH3A-204ENST00000473381 EIF4G2P78344 907 aaKnown RBP eCLIP18.42■□□□□ 0.54
UBASH3A-204ENST00000473381 CAMSAP2Q08AD1 1489 aa18.41■□□□□ 0.54
UBASH3A-204ENST00000473381 CFDP1Q9UEE9 299 aaPredicted RBP18.41■□□□□ 0.54
UBASH3A-204ENST00000473381 CARMIL2Q6F5E8 1435 aa18.4■□□□□ 0.54
UBASH3A-204ENST00000473381 RPRD2Q5VT52 1461 aaKnown RBP18.4■□□□□ 0.54
UBASH3A-204ENST00000473381 NUP160Q12769 1436 aa18.39■□□□□ 0.53
UBASH3A-204ENST00000473381 JPH4Q96JJ6 628 aa18.39■□□□□ 0.53
UBASH3A-204ENST00000473381 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
UBASH3A-204ENST00000473381 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.53
UBASH3A-204ENST00000473381 ITSN2Q9NZM3 1697 aa18.38■□□□□ 0.53
UBASH3A-204ENST00000473381 KIF14Q15058 1648 aa18.38■□□□□ 0.53
UBASH3A-204ENST00000473381 ADCY10Q96PN6 1610 aa18.37■□□□□ 0.53
UBASH3A-204ENST00000473381 TEX14Q8IWB6 1497 aa18.36■□□□□ 0.53
UBASH3A-204ENST00000473381 ZNF777Q9ULD5 760 aaPredicted RBP18.36■□□□□ 0.53
UBASH3A-204ENST00000473381 FKBP8Q14318 412 aa18.36■□□□□ 0.53
UBASH3A-204ENST00000473381 NCOA1Q15788 1441 aa18.35■□□□□ 0.53
UBASH3A-204ENST00000473381 NBPF8Q3BBV2 869 aa18.35■□□□□ 0.53
UBASH3A-204ENST00000473381 PZPP20742 1482 aa18.34■□□□□ 0.53
UBASH3A-204ENST00000473381 ADGBQ8N7X0 1667 aa18.33■□□□□ 0.52
UBASH3A-204ENST00000473381 BCANQ96GW7 911 aa18.33■□□□□ 0.52
UBASH3A-204ENST00000473381 ADGRL2O95490 1459 aa18.32■□□□□ 0.52
UBASH3A-204ENST00000473381 CNTLNQ9NXG0 1405 aa18.31■□□□□ 0.52
UBASH3A-204ENST00000473381 C11orf95C9JLR9 678 aaPredicted RBP18.31■□□□□ 0.52
UBASH3A-204ENST00000473381 CROCC2H7BZ55 1655 aa18.3■□□□□ 0.52
UBASH3A-204ENST00000473381 ABCA8O94911 1581 aa18.3■□□□□ 0.52
UBASH3A-204ENST00000473381 CCDC7Q96M83 1385 aa18.29■□□□□ 0.52
UBASH3A-204ENST00000473381 PLEKHD1A6NEE1 506 aa18.29■□□□□ 0.52
UBASH3A-204ENST00000473381 NEFLP07196 543 aa18.28■□□□□ 0.52
UBASH3A-204ENST00000473381 ANKRD30AQ9BXX3 1397 aa18.28■□□□□ 0.52
UBASH3A-204ENST00000473381 TSHZ2Q9NRE2 1034 aa18.27■□□□□ 0.51
UBASH3A-204ENST00000473381 ATP10BO94823 1461 aa18.27■□□□□ 0.51
UBASH3A-204ENST00000473381 KIAA1107Q9UPP5 1409 aa18.26■□□□□ 0.51
UBASH3A-204ENST00000473381 ABCC10Q5T3U5 1492 aa18.26■□□□□ 0.51
UBASH3A-204ENST00000473381 HNRNPUQ00839 825 aaKnown RBP eCLIP18.25■□□□□ 0.51
UBASH3A-204ENST00000473381 SPATA31E1Q6ZUB1 1445 aa18.25■□□□□ 0.51
UBASH3A-204ENST00000473381 CDC42BPAQ5VT25 1732 aa18.24■□□□□ 0.51
UBASH3A-204ENST00000473381 ANKRD50Q9ULJ7 1429 aa18.24■□□□□ 0.51
UBASH3A-204ENST00000473381 PKD2Q13563 968 aa18.23■□□□□ 0.51
UBASH3A-204ENST00000473381 MBD5Q9P267 1494 aa18.21■□□□□ 0.51
UBASH3A-204ENST00000473381 KIF7Q2M1P5 1343 aa18.21■□□□□ 0.51
UBASH3A-204ENST00000473381 SHANK2Q9UPX8 1470 aa18.21■□□□□ 0.51
UBASH3A-204ENST00000473381 C9orf84Q5VXU9 1444 aa18.2■□□□□ 0.5
UBASH3A-204ENST00000473381 CCDC184Q52MB2 194 aa18.2■□□□□ 0.5
UBASH3A-204ENST00000473381 PRKRIP1Q9H875 184 aaPredicted RBP18.2■□□□□ 0.5
UBASH3A-204ENST00000473381 NUP155O75694 1391 aa18.16■□□□□ 0.5
UBASH3A-204ENST00000473381 PTPRGP23470 1445 aa18.16■□□□□ 0.5
UBASH3A-204ENST00000473381 POLR1AO95602 1720 aaPredicted RBP18.16■□□□□ 0.5
UBASH3A-204ENST00000473381 TSPY4P0CV99 314 aa18.16■□□□□ 0.5
UBASH3A-204ENST00000473381 TSPY10P0CW01 314 aa18.16■□□□□ 0.5
UBASH3A-204ENST00000473381 ZNF326Q5BKZ1 582 aaKnown RBP18.15■□□□□ 0.5
UBASH3A-204ENST00000473381 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.49
UBASH3A-204ENST00000473381 USP47Q96K76 1375 aa18.12■□□□□ 0.49
UBASH3A-204ENST00000473381 MRS2Q9HD23 443 aa18.12■□□□□ 0.49
UBASH3A-204ENST00000473381 KIF15Q9NS87 1388 aa18.12■□□□□ 0.49
UBASH3A-204ENST00000473381 KDM5DQ9BY66 1539 aa18.12■□□□□ 0.49
UBASH3A-204ENST00000473381 ARHGEF5Q12774 1597 aa18.11■□□□□ 0.49
UBASH3A-204ENST00000473381 FAM9BQ8IZU0 186 aa18.1■□□□□ 0.49
UBASH3A-204ENST00000473381 UHRF1BP1Q6BDS2 1440 aa18.08■□□□□ 0.49
UBASH3A-204ENST00000473381 BCORL1Q5H9F3 1711 aa18.08■□□□□ 0.48
UBASH3A-204ENST00000473381 SAMD9LQ8IVG5 1584 aa18.08■□□□□ 0.48
UBASH3A-204ENST00000473381 MYT1Q01538 1121 aa18.08■□□□□ 0.48
UBASH3A-204ENST00000473381 KDM5CP41229 1560 aa18.07■□□□□ 0.48
UBASH3A-204ENST00000473381 CCDC141Q6ZP82 1450 aa18.07■□□□□ 0.48
UBASH3A-204ENST00000473381 RALGAPBQ86X10 1494 aa18.06■□□□□ 0.48
UBASH3A-204ENST00000473381 PREX2Q70Z35 1606 aa18.06■□□□□ 0.48
UBASH3A-204ENST00000473381 DHX29Q7Z478 1369 aaKnown RBP18.06■□□□□ 0.48
UBASH3A-204ENST00000473381 ARHGEF12Q9NZN5 1544 aa18.05■□□□□ 0.48
UBASH3A-204ENST00000473381 CDC42BPBQ9Y5S2 1711 aa18.05■□□□□ 0.48
UBASH3A-204ENST00000473381 POLR3GLQ9BT43 218 aa18.05■□□□□ 0.48
UBASH3A-204ENST00000473381 CHD1O14646 1710 aa18.04■□□□□ 0.48
UBASH3A-204ENST00000473381 IRX6P78412 446 aaPredicted RBP18.03■□□□□ 0.48
UBASH3A-204ENST00000473381 ARID4BQ4LE39 1312 aaPredicted RBP18.03■□□□□ 0.48
UBASH3A-204ENST00000473381 RSPH4AQ5TD94 716 aa18.02■□□□□ 0.48
UBASH3A-204ENST00000473381 CARD11Q9BXL7 1154 aa18.02■□□□□ 0.48
UBASH3A-204ENST00000473381 ZBED9Q6R2W3 1325 aa18.02■□□□□ 0.47
UBASH3A-204ENST00000473381 KDM2AQ9Y2K7 1162 aa18.02■□□□□ 0.47
UBASH3A-204ENST00000473381 FAM135AQ9P2D6 1515 aa18■□□□□ 0.47
UBASH3A-204ENST00000473381 SYCP2Q9BX26 1530 aa17.99■□□□□ 0.47
UBASH3A-204ENST00000473381 SHROOM2Q13796 1616 aa17.99■□□□□ 0.47
UBASH3A-204ENST00000473381 CNGB1Q14028 1251 aaPredicted RBP17.99■□□□□ 0.47
UBASH3A-204ENST00000473381 DCAF11Q8TEB1 546 aa17.99■□□□□ 0.47
UBASH3A-204ENST00000473381 TTC37Q6PGP7 1564 aa17.99■□□□□ 0.47
UBASH3A-204ENST00000473381 ARHGAP5Q13017 1502 aa17.98■□□□□ 0.47
UBASH3A-204ENST00000473381 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.97■□□□□ 0.47
UBASH3A-204ENST00000473381 ROCK2O75116 1388 aaKnown RBP17.96■□□□□ 0.47
UBASH3A-204ENST00000473381 ERCC6L2Q5T890 1561 aa17.95■□□□□ 0.46
UBASH3A-204ENST00000473381 MAST1Q9Y2H9 1570 aa17.95■□□□□ 0.46
UBASH3A-204ENST00000473381 ST20-MTHFSA0A0A6YYL1 179 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms