RNA–Protein interactions for RNA: ENST00000473182.2

RAPGEF4-210, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 4

Gene RAPGEF4, Length 599 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-210ENST00000473182 SCAPERQ9BY12 1400 aa13.08□□□□□ -0.32
RAPGEF4-210ENST00000473182 ATP1B4Q9UN42 357 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF4-210ENST00000473182 MAGI2Q86UL8 1455 aa13.08□□□□□ -0.32
RAPGEF4-210ENST00000473182 SIGLEC1Q9BZZ2 1709 aa13.08□□□□□ -0.32
RAPGEF4-210ENST00000473182 FER1L4A9Z1Z3 1794 aa13.07□□□□□ -0.32
RAPGEF4-210ENST00000473182 HECW1Q76N89 1606 aa13.07□□□□□ -0.32
RAPGEF4-210ENST00000473182 CDK13Q14004 1512 aaKnown RBP13.06□□□□□ -0.32
RAPGEF4-210ENST00000473182 EEA1Q15075 1411 aa13.05□□□□□ -0.32
RAPGEF4-210ENST00000473182 MYT1LQ9UL68 1186 aa13.05□□□□□ -0.32
RAPGEF4-210ENST00000473182 CEBPAP49715 358 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF4-210ENST00000473182 EHMT2Q96KQ7 1210 aa13.04□□□□□ -0.32
RAPGEF4-210ENST00000473182 PLCH2O75038 1416 aa13.04□□□□□ -0.32
RAPGEF4-210ENST00000473182 ATP10AO60312 1499 aa13.03□□□□□ -0.32
RAPGEF4-210ENST00000473182 EFCAB2Q5VUJ9 269 aa13.02□□□□□ -0.33
RAPGEF4-210ENST00000473182 C9orf84Q5VXU9 1444 aa13.02□□□□□ -0.33
RAPGEF4-210ENST00000473182 PREX1Q8TCU6 1659 aa13□□□□□ -0.33
RAPGEF4-210ENST00000473182 ARHGEF12Q9NZN5 1544 aa13□□□□□ -0.33
RAPGEF4-210ENST00000473182 DISP3Q9P2K9 1392 aa13□□□□□ -0.33
RAPGEF4-210ENST00000473182 CDK11AQ9UQ88 783 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF4-210ENST00000473182 DMRT2Q9Y5R5 561 aa12.99□□□□□ -0.33
RAPGEF4-210ENST00000473182 MYO5CQ9NQX4 1742 aa12.99□□□□□ -0.33
RAPGEF4-210ENST00000473182 UBTFP17480 764 aaKnown RBP12.98□□□□□ -0.33
RAPGEF4-210ENST00000473182 AFAP1Q8N556 730 aa12.97□□□□□ -0.33
RAPGEF4-210ENST00000473182 ZNF518AQ6AHZ1 1483 aa12.97□□□□□ -0.33
RAPGEF4-210ENST00000473182 UHRF1BP1Q6BDS2 1440 aa12.96□□□□□ -0.33
RAPGEF4-210ENST00000473182 ESF1Q9H501 851 aaKnown RBP12.96□□□□□ -0.33
RAPGEF4-210ENST00000473182 ARHGAP5Q13017 1502 aa12.96□□□□□ -0.33
RAPGEF4-210ENST00000473182 FMN1Q68DA7 1419 aa12.96□□□□□ -0.34
RAPGEF4-210ENST00000473182 KIF14Q15058 1648 aa12.94□□□□□ -0.34
RAPGEF4-210ENST00000473182 CLIP1P30622 1438 aa12.94□□□□□ -0.34
RAPGEF4-210ENST00000473182 ILDR2Q71H61 639 aa12.93□□□□□ -0.34
RAPGEF4-210ENST00000473182 STRCQ7RTU9 1775 aa12.92□□□□□ -0.34
RAPGEF4-210ENST00000473182 TROQ12816 1431 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF4-210ENST00000473182 KDM5CP41229 1560 aa12.91□□□□□ -0.34
RAPGEF4-210ENST00000473182 DIP2CQ9Y2E4 1556 aa12.91□□□□□ -0.34
RAPGEF4-210ENST00000473182 SOCS7O14512 581 aa12.9□□□□□ -0.34
RAPGEF4-210ENST00000473182 ARHGAP35Q9NRY4 1499 aa12.9□□□□□ -0.34
RAPGEF4-210ENST00000473182 SETD1BQ9UPS6 1966 aaKnown RBP12.89□□□□□ -0.35
RAPGEF4-210ENST00000473182 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
RAPGEF4-210ENST00000473182 PTPRTO14522 1441 aa12.88□□□□□ -0.35
RAPGEF4-210ENST00000473182 C3P01024 1663 aa12.87□□□□□ -0.35
RAPGEF4-210ENST00000473182 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
RAPGEF4-210ENST00000473182 REREQ9P2R6 1566 aa12.86□□□□□ -0.35
RAPGEF4-210ENST00000473182 MLH3Q9UHC1 1453 aa12.86□□□□□ -0.35
RAPGEF4-210ENST00000473182 TRAPPC8Q9Y2L5 1435 aa12.86□□□□□ -0.35
RAPGEF4-210ENST00000473182 CDC42BPBQ9Y5S2 1711 aa12.85□□□□□ -0.35
RAPGEF4-210ENST00000473182 ZNF777Q9ULD5 760 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF4-210ENST00000473182 ABCC1P33527 1531 aa12.83□□□□□ -0.35
RAPGEF4-210ENST00000473182 AGLP35573 1532 aa12.83□□□□□ -0.35
RAPGEF4-210ENST00000473182 LRRIQ1Q96JM4 1722 aa12.83□□□□□ -0.36
RAPGEF4-210ENST00000473182 CNTLNQ9NXG0 1405 aa12.83□□□□□ -0.36
RAPGEF4-210ENST00000473182 PREX2Q70Z35 1606 aa12.83□□□□□ -0.36
RAPGEF4-210ENST00000473182 ITSN2Q9NZM3 1697 aa12.83□□□□□ -0.36
RAPGEF4-210ENST00000473182 NCOA1Q15788 1441 aa12.82□□□□□ -0.36
RAPGEF4-210ENST00000473182 LTBP4Q8N2S1 1624 aa12.81□□□□□ -0.36
RAPGEF4-210ENST00000473182 NCKAP5LQ9HCH0 1330 aa12.8□□□□□ -0.36
RAPGEF4-210ENST00000473182 CAMSAP1Q5T5Y3 1602 aa12.8□□□□□ -0.36
RAPGEF4-210ENST00000473182 IQSEC2Q5JU85 1478 aa12.79□□□□□ -0.36
RAPGEF4-210ENST00000473182 CCDC18Q5T9S5 1454 aa12.79□□□□□ -0.36
RAPGEF4-210ENST00000473182 KIDINS220Q9ULH0 1771 aa12.79□□□□□ -0.36
RAPGEF4-210ENST00000473182 UBAP1LF5GYI3 381 aa12.78□□□□□ -0.36
RAPGEF4-210ENST00000473182 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
RAPGEF4-210ENST00000473182 ZMYM3Q14202 1370 aa12.78□□□□□ -0.36
RAPGEF4-210ENST00000473182 CASKIN1Q8WXD9 1431 aa12.78□□□□□ -0.36
RAPGEF4-210ENST00000473182 ZNF335Q9H4Z2 1342 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF4-210ENST00000473182 NPATQ14207 1427 aa12.77□□□□□ -0.37
RAPGEF4-210ENST00000473182 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.37
RAPGEF4-210ENST00000473182 HNRNPMP52272 730 aaKnown RBP eCLIP12.76□□□□□ -0.37
RAPGEF4-210ENST00000473182 SYCP2Q9BX26 1530 aa12.76□□□□□ -0.37
RAPGEF4-210ENST00000473182 CDC42BPAQ5VT25 1732 aa12.76□□□□□ -0.37
RAPGEF4-210ENST00000473182 SUPT6HQ7KZ85 1726 aaKnown RBP12.76□□□□□ -0.37
RAPGEF4-210ENST00000473182 MROH2AA6NES4 1674 aa12.75□□□□□ -0.37
RAPGEF4-210ENST00000473182 GGT6Q6P531 493 aa12.75□□□□□ -0.37
RAPGEF4-210ENST00000473182 CLTCQ00610 1675 aaKnown RBP12.73□□□□□ -0.37
RAPGEF4-210ENST00000473182 PKD2Q13563 968 aa12.73□□□□□ -0.37
RAPGEF4-210ENST00000473182 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
RAPGEF4-210ENST00000473182 CFDP1Q9UEE9 299 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF4-210ENST00000473182 MYO3AQ8NEV4 1616 aa12.72□□□□□ -0.37
RAPGEF4-210ENST00000473182 ATP7AQ04656 1500 aa12.72□□□□□ -0.37
RAPGEF4-210ENST00000473182 PPP6R1Q9UPN7 881 aa12.71□□□□□ -0.37
RAPGEF4-210ENST00000473182 GPATCH8Q9UKJ3 1502 aaKnown RBP12.71□□□□□ -0.38
RAPGEF4-210ENST00000473182 A2MP01023 1474 aa12.71□□□□□ -0.38
RAPGEF4-210ENST00000473182 FYCO1Q9BQS8 1478 aa12.71□□□□□ -0.38
RAPGEF4-210ENST00000473182 CEP170BQ9Y4F5 1589 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF4-210ENST00000473182 PLA2R1Q13018 1463 aa12.7□□□□□ -0.38
RAPGEF4-210ENST00000473182 CCNB3Q8WWL7 1395 aa12.69□□□□□ -0.38
RAPGEF4-210ENST00000473182 PLEKHH2Q8IVE3 1493 aa12.69□□□□□ -0.38
RAPGEF4-210ENST00000473182 ZNF142P52746 1687 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF4-210ENST00000473182 PTPRKQ15262 1439 aa12.69□□□□□ -0.38
RAPGEF4-210ENST00000473182 TCOF1Q13428 1488 aaKnown RBP12.68□□□□□ -0.38
RAPGEF4-210ENST00000473182 PLXNC1O60486 1568 aa12.68□□□□□ -0.38
RAPGEF4-210ENST00000473182 INO80Q9ULG1 1556 aaPredicted RBP12.68□□□□□ -0.38
RAPGEF4-210ENST00000473182 PIP4K2BP78356 416 aa12.67□□□□□ -0.38
RAPGEF4-210ENST00000473182 KIAA1107Q9UPP5 1409 aa12.67□□□□□ -0.38
RAPGEF4-210ENST00000473182 MTUS2Q5JR59 1369 aa12.66□□□□□ -0.38
RAPGEF4-210ENST00000473182 TOM1O60784 492 aa12.64□□□□□ -0.39
RAPGEF4-210ENST00000473182 A2ML1A8K2U0 1454 aa12.64□□□□□ -0.39
RAPGEF4-210ENST00000473182 ADGBQ8N7X0 1667 aa12.64□□□□□ -0.39
RAPGEF4-210ENST00000473182 ZNF644Q9H582 1327 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF4-210ENST00000473182 HSPA1LP34931 641 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms