RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 ABCA9Q8IUA7 1624 aa10.67□□□□□ -0.7
HDAC1-205ENST00000472928 ARID3CA6NKF2 412 aa10.67□□□□□ -0.7
HDAC1-205ENST00000472928 RNF39Q9H2S5 420 aa10.66□□□□□ -0.7
HDAC1-205ENST00000472928 NEO1Q92859 1461 aa10.66□□□□□ -0.7
HDAC1-205ENST00000472928 HSPA2P54652 639 aa10.64□□□□□ -0.71
HDAC1-205ENST00000472928 ARID4BQ4LE39 1312 aaPredicted RBP10.63□□□□□ -0.71
HDAC1-205ENST00000472928 ARHGEF40Q8TER5 1519 aa10.63□□□□□ -0.71
HDAC1-205ENST00000472928 PRXQ9BXM0 1461 aa10.62□□□□□ -0.71
HDAC1-205ENST00000472928 CERKQ8TCT0 537 aa10.62□□□□□ -0.71
HDAC1-205ENST00000472928 SPINK5Q9NQ38 1064 aaPredicted RBP10.62□□□□□ -0.71
HDAC1-205ENST00000472928 RIMS1Q86UR5 1692 aaKnown RBP10.62□□□□□ -0.71
HDAC1-205ENST00000472928 ILDR2Q71H61 639 aa10.61□□□□□ -0.71
HDAC1-205ENST00000472928 MKRN4PQ13434 485 aaPredicted RBP10.59□□□□□ -0.71
HDAC1-205ENST00000472928 P3H3Q8IVL6 736 aa10.59□□□□□ -0.71
HDAC1-205ENST00000472928 FHOD3Q2V2M9 1422 aa10.58□□□□□ -0.72
HDAC1-205ENST00000472928 DENND4BO75064 1496 aaPredicted RBP10.58□□□□□ -0.72
HDAC1-205ENST00000472928 SIGLEC1Q9BZZ2 1709 aa10.58□□□□□ -0.72
HDAC1-205ENST00000472928 SOCS7O14512 581 aa10.57□□□□□ -0.72
HDAC1-205ENST00000472928 RICTORQ6R327 1708 aa10.57□□□□□ -0.72
HDAC1-205ENST00000472928 DISP3Q9P2K9 1392 aa10.56□□□□□ -0.72
HDAC1-205ENST00000472928 YEATS2Q9ULM3 1422 aa10.56□□□□□ -0.72
HDAC1-205ENST00000472928 SAMD9Q5K651 1589 aa10.56□□□□□ -0.72
HDAC1-205ENST00000472928 NUP153P49790 1475 aaKnown RBP10.55□□□□□ -0.72
HDAC1-205ENST00000472928 RAPGEF6Q8TEU7 1601 aa10.55□□□□□ -0.72
HDAC1-205ENST00000472928 ZMYM4Q5VZL5 1548 aa10.55□□□□□ -0.72
HDAC1-205ENST00000472928 AKNAQ7Z591 1439 aa10.55□□□□□ -0.72
HDAC1-205ENST00000472928 FANCAO15360 1455 aa10.55□□□□□ -0.72
HDAC1-205ENST00000472928 C1QBPQ07021 282 aaKnown RBP10.54□□□□□ -0.72
HDAC1-205ENST00000472928 POGZQ7Z3K3 1410 aa10.54□□□□□ -0.72
HDAC1-205ENST00000472928 POTEDQ86YR6 584 aa10.53□□□□□ -0.72
HDAC1-205ENST00000472928 ZFYVE16Q7Z3T8 1539 aa10.53□□□□□ -0.72
HDAC1-205ENST00000472928 TTC37Q6PGP7 1564 aa10.52□□□□□ -0.72
HDAC1-205ENST00000472928 SPDYE4A6NLX3 237 aa10.52□□□□□ -0.73
HDAC1-205ENST00000472928 CAPN15O75808 1086 aa10.52□□□□□ -0.73
HDAC1-205ENST00000472928 FAM9AQ8IZU1 332 aaPredicted RBP10.52□□□□□ -0.73
HDAC1-205ENST00000472928 MLECQ14165 292 aa10.51□□□□□ -0.73
HDAC1-205ENST00000472928 POLA2Q14181 598 aa10.51□□□□□ -0.73
HDAC1-205ENST00000472928 EFCAB5A4FU69 1503 aa10.51□□□□□ -0.73
HDAC1-205ENST00000472928 MAGI2Q86UL8 1455 aa10.5□□□□□ -0.73
HDAC1-205ENST00000472928 FER1L4A9Z1Z3 1794 aa10.5□□□□□ -0.73
HDAC1-205ENST00000472928 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.5□□□□□ -0.73
HDAC1-205ENST00000472928 ARHGEF12Q9NZN5 1544 aa10.5□□□□□ -0.73
HDAC1-205ENST00000472928 HECW1Q76N89 1606 aa10.49□□□□□ -0.73
HDAC1-205ENST00000472928 CFAP74Q9C0B2 1584 aa10.48□□□□□ -0.73
HDAC1-205ENST00000472928 PLEKHD1A6NEE1 506 aa10.48□□□□□ -0.73
HDAC1-205ENST00000472928 SPATA31D1Q6ZQQ2 1576 aa10.48□□□□□ -0.73
HDAC1-205ENST00000472928 STRCQ7RTU9 1775 aa10.47□□□□□ -0.73
HDAC1-205ENST00000472928 CEBPAP49715 358 aaPredicted RBP10.47□□□□□ -0.73
HDAC1-205ENST00000472928 PREX1Q8TCU6 1659 aa10.47□□□□□ -0.73
HDAC1-205ENST00000472928 SCAPERQ9BY12 1400 aa10.46□□□□□ -0.74
HDAC1-205ENST00000472928 ATP10AO60312 1499 aa10.46□□□□□ -0.74
HDAC1-205ENST00000472928 PROM2Q8N271 834 aa10.45□□□□□ -0.74
HDAC1-205ENST00000472928 C9orf84Q5VXU9 1444 aa10.44□□□□□ -0.74
HDAC1-205ENST00000472928 PLCH2O75038 1416 aa10.43□□□□□ -0.74
HDAC1-205ENST00000472928 SETD1BQ9UPS6 1966 aaKnown RBP10.43□□□□□ -0.74
HDAC1-205ENST00000472928 PTPRTO14522 1441 aa10.42□□□□□ -0.74
HDAC1-205ENST00000472928 UHRF1BP1Q6BDS2 1440 aa10.42□□□□□ -0.74
HDAC1-205ENST00000472928 FBXO3Q9UK99 471 aa10.42□□□□□ -0.74
HDAC1-205ENST00000472928 LTBP4Q8N2S1 1624 aa10.42□□□□□ -0.74
HDAC1-205ENST00000472928 CDK13Q14004 1512 aaKnown RBP10.42□□□□□ -0.74
HDAC1-205ENST00000472928 RANGAP1P46060 587 aaPredicted RBP10.4□□□□□ -0.74
HDAC1-205ENST00000472928 EEA1Q15075 1411 aa10.39□□□□□ -0.75
HDAC1-205ENST00000472928 IQSEC2Q5JU85 1478 aa10.38□□□□□ -0.75
HDAC1-205ENST00000472928 ABCB7O75027 752 aa10.38□□□□□ -0.75
HDAC1-205ENST00000472928 ZBTB12Q9Y330 459 aaPredicted RBP10.38□□□□□ -0.75
HDAC1-205ENST00000472928 KDM5CP41229 1560 aa10.38□□□□□ -0.75
HDAC1-205ENST00000472928 NCOA1Q15788 1441 aa10.37□□□□□ -0.75
HDAC1-205ENST00000472928 EFCAB2Q5VUJ9 269 aa10.37□□□□□ -0.75
HDAC1-205ENST00000472928 ZNF518AQ6AHZ1 1483 aa10.36□□□□□ -0.75
HDAC1-205ENST00000472928 DIP2CQ9Y2E4 1556 aa10.36□□□□□ -0.75
HDAC1-205ENST00000472928 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
HDAC1-205ENST00000472928 AFAP1Q8N556 730 aa10.36□□□□□ -0.75
HDAC1-205ENST00000472928 REREQ9P2R6 1566 aa10.35□□□□□ -0.75
HDAC1-205ENST00000472928 C3P01024 1663 aa10.35□□□□□ -0.75
HDAC1-205ENST00000472928 TRAPPC8Q9Y2L5 1435 aa10.34□□□□□ -0.75
HDAC1-205ENST00000472928 AGLP35573 1532 aa10.33□□□□□ -0.76
HDAC1-205ENST00000472928 KIF14Q15058 1648 aa10.33□□□□□ -0.76
HDAC1-205ENST00000472928 ABCA6Q8N139 1617 aa10.33□□□□□ -0.76
HDAC1-205ENST00000472928 MYO5CQ9NQX4 1742 aa10.33□□□□□ -0.76
HDAC1-205ENST00000472928 MLH3Q9UHC1 1453 aa10.32□□□□□ -0.76
HDAC1-205ENST00000472928 ARHGAP5Q13017 1502 aa10.31□□□□□ -0.76
HDAC1-205ENST00000472928 TROQ12816 1431 aaPredicted RBP10.3□□□□□ -0.76
HDAC1-205ENST00000472928 ZNF335Q9H4Z2 1342 aaPredicted RBP10.3□□□□□ -0.76
HDAC1-205ENST00000472928 CAMSAP1Q5T5Y3 1602 aa10.29□□□□□ -0.76
HDAC1-205ENST00000472928 VASPP50552 380 aaPredicted RBP10.29□□□□□ -0.76
HDAC1-205ENST00000472928 CNTLNQ9NXG0 1405 aa10.29□□□□□ -0.76
HDAC1-205ENST00000472928 NPATQ14207 1427 aa10.28□□□□□ -0.76
HDAC1-205ENST00000472928 UBAP1LF5GYI3 381 aa10.28□□□□□ -0.76
HDAC1-205ENST00000472928 NCKAP5LQ9HCH0 1330 aa10.28□□□□□ -0.76
HDAC1-205ENST00000472928 ABCC1P33527 1531 aa10.28□□□□□ -0.76
HDAC1-205ENST00000472928 DSG3P32926 999 aa10.27□□□□□ -0.77
HDAC1-205ENST00000472928 MYT1LQ9UL68 1186 aa10.27□□□□□ -0.77
HDAC1-205ENST00000472928 FMN1Q68DA7 1419 aa10.26□□□□□ -0.77
HDAC1-205ENST00000472928 ARHGAP35Q9NRY4 1499 aa10.26□□□□□ -0.77
HDAC1-205ENST00000472928 ESF1Q9H501 851 aaKnown RBP10.26□□□□□ -0.77
HDAC1-205ENST00000472928 ATP1B4Q9UN42 357 aaPredicted RBP10.26□□□□□ -0.77
HDAC1-205ENST00000472928 CDK11AQ9UQ88 783 aaPredicted RBP10.26□□□□□ -0.77
HDAC1-205ENST00000472928 CDC42BPBQ9Y5S2 1711 aa10.26□□□□□ -0.77
HDAC1-205ENST00000472928 KIDINS220Q9ULH0 1771 aa10.26□□□□□ -0.77
HDAC1-205ENST00000472928 PLA2R1Q13018 1463 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms