RNA–Protein interactions for RNA: ENST00000472883.1

CDK5RAP2-208, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 3

Gene CDK5RAP2, Length 389 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-208ENST00000472883 C3P01024 1663 aa12.96□□□□□ -0.33
CDK5RAP2-208ENST00000472883 PHF23Q9BUL5 403 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP2-208ENST00000472883 HECW1Q76N89 1606 aa12.95□□□□□ -0.34
CDK5RAP2-208ENST00000472883 CEBPAP49715 358 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP2-208ENST00000472883 FAM9AQ8IZU1 332 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP2-208ENST00000472883 C9orf84Q5VXU9 1444 aa12.92□□□□□ -0.34
CDK5RAP2-208ENST00000472883 ATP10AO60312 1499 aa12.91□□□□□ -0.34
CDK5RAP2-208ENST00000472883 HSPA1LP34931 641 aa12.91□□□□□ -0.34
CDK5RAP2-208ENST00000472883 SUPT6HQ7KZ85 1726 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP2-208ENST00000472883 CAMSAP1Q5T5Y3 1602 aa12.88□□□□□ -0.35
CDK5RAP2-208ENST00000472883 TRAPPC8Q9Y2L5 1435 aa12.88□□□□□ -0.35
CDK5RAP2-208ENST00000472883 RAPGEF6Q8TEU7 1601 aa12.87□□□□□ -0.35
CDK5RAP2-208ENST00000472883 ZNF335Q9H4Z2 1342 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP2-208ENST00000472883 ARID3CA6NKF2 412 aa12.86□□□□□ -0.35
CDK5RAP2-208ENST00000472883 TOM1O60784 492 aa12.84□□□□□ -0.35
CDK5RAP2-208ENST00000472883 SCAF1Q9H7N4 1312 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP2-208ENST00000472883 ZNF142P52746 1687 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP2-208ENST00000472883 SRCAPQ6ZRS2 3230 aa12.83□□□□□ -0.36
CDK5RAP2-208ENST00000472883 REREQ9P2R6 1566 aa12.82□□□□□ -0.36
CDK5RAP2-208ENST00000472883 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDK5RAP2-208ENST00000472883 PLA2R1Q13018 1463 aa12.81□□□□□ -0.36
CDK5RAP2-208ENST00000472883 MROH2AA6NES4 1674 aa12.8□□□□□ -0.36
CDK5RAP2-208ENST00000472883 AGLP35573 1532 aa12.8□□□□□ -0.36
CDK5RAP2-208ENST00000472883 PIP4K2BP78356 416 aa12.8□□□□□ -0.36
CDK5RAP2-208ENST00000472883 PKD2Q13563 968 aa12.8□□□□□ -0.36
CDK5RAP2-208ENST00000472883 CPS1P31327 1500 aa12.79□□□□□ -0.36
CDK5RAP2-208ENST00000472883 NPATQ14207 1427 aa12.79□□□□□ -0.36
CDK5RAP2-208ENST00000472883 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
CDK5RAP2-208ENST00000472883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP2-208ENST00000472883 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP2-208ENST00000472883 TCOF1Q13428 1488 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP2-208ENST00000472883 SUPT5HO00267 1087 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP2-208ENST00000472883 CNTLNQ9NXG0 1405 aa12.77□□□□□ -0.37
CDK5RAP2-208ENST00000472883 ESF1Q9H501 851 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP2-208ENST00000472883 PTPRKQ15262 1439 aa12.76□□□□□ -0.37
CDK5RAP2-208ENST00000472883 NUP153P49790 1475 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP2-208ENST00000472883 PLEKHD1A6NEE1 506 aa12.75□□□□□ -0.37
CDK5RAP2-208ENST00000472883 KDM5CP41229 1560 aa12.75□□□□□ -0.37
CDK5RAP2-208ENST00000472883 NCKAP5LQ9HCH0 1330 aa12.75□□□□□ -0.37
CDK5RAP2-208ENST00000472883 MYO5CQ9NQX4 1742 aa12.75□□□□□ -0.37
CDK5RAP2-208ENST00000472883 POLR1AO95602 1720 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP2-208ENST00000472883 SAMD9Q5K651 1589 aa12.74□□□□□ -0.37
CDK5RAP2-208ENST00000472883 DIP2CQ9Y2E4 1556 aa12.74□□□□□ -0.37
CDK5RAP2-208ENST00000472883 ZNF518AQ6AHZ1 1483 aa12.74□□□□□ -0.37
CDK5RAP2-208ENST00000472883 RGS17Q9UGC6 210 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP2-208ENST00000472883 MYO3AQ8NEV4 1616 aa12.73□□□□□ -0.37
CDK5RAP2-208ENST00000472883 PLCH2O75038 1416 aa12.72□□□□□ -0.37
CDK5RAP2-208ENST00000472883 PPP6R1Q9UPN7 881 aa12.72□□□□□ -0.37
CDK5RAP2-208ENST00000472883 ALKQ9UM73 1620 aa12.72□□□□□ -0.37
CDK5RAP2-208ENST00000472883 CEP170BQ9Y4F5 1589 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP2-208ENST00000472883 SETD1AO15047 1707 aaKnown RBP12.71□□□□□ -0.38
CDK5RAP2-208ENST00000472883 ABCA6Q8N139 1617 aa12.7□□□□□ -0.38
CDK5RAP2-208ENST00000472883 SHANK2Q9UPX8 1470 aa12.68□□□□□ -0.38
CDK5RAP2-208ENST00000472883 P3H3Q8IVL6 736 aa12.67□□□□□ -0.38
CDK5RAP2-208ENST00000472883 MLH3Q9UHC1 1453 aa12.65□□□□□ -0.38
CDK5RAP2-208ENST00000472883 EFCAB2Q5VUJ9 269 aa12.65□□□□□ -0.38
CDK5RAP2-208ENST00000472883 RNF17Q9BXT8 1623 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP2-208ENST00000472883 POTEAQ6S8J7 498 aa12.63□□□□□ -0.39
CDK5RAP2-208ENST00000472883 ZMYM3Q14202 1370 aa12.63□□□□□ -0.39
CDK5RAP2-208ENST00000472883 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
CDK5RAP2-208ENST00000472883 CLTCQ00610 1675 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP2-208ENST00000472883 NEURL4Q96JN8 1562 aa12.62□□□□□ -0.39
CDK5RAP2-208ENST00000472883 DNMT1P26358 1616 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP2-208ENST00000472883 KIDINS220Q9ULH0 1771 aa12.61□□□□□ -0.39
CDK5RAP2-208ENST00000472883 VWDEQ8N2E2 1590 aa12.61□□□□□ -0.39
CDK5RAP2-208ENST00000472883 AFAP1Q8N556 730 aa12.6□□□□□ -0.39
CDK5RAP2-208ENST00000472883 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
CDK5RAP2-208ENST00000472883 SYNMO15061 1565 aa12.6□□□□□ -0.39
CDK5RAP2-208ENST00000472883 A2ML1A8K2U0 1454 aa12.58□□□□□ -0.4
CDK5RAP2-208ENST00000472883 CDC42BPBQ9Y5S2 1711 aa12.57□□□□□ -0.4
CDK5RAP2-208ENST00000472883 STRCP1A6NGW2 1772 aa12.57□□□□□ -0.4
CDK5RAP2-208ENST00000472883 ITSN2Q9NZM3 1697 aa12.57□□□□□ -0.4
CDK5RAP2-208ENST00000472883 UPF1Q92900 1129 aaKnown RBP eCLIP12.56□□□□□ -0.4
CDK5RAP2-208ENST00000472883 ARHGAP5Q13017 1502 aa12.56□□□□□ -0.4
CDK5RAP2-208ENST00000472883 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
CDK5RAP2-208ENST00000472883 KIF14Q15058 1648 aa12.54□□□□□ -0.4
CDK5RAP2-208ENST00000472883 CDK13Q14004 1512 aaKnown RBP12.52□□□□□ -0.4
CDK5RAP2-208ENST00000472883 LRRC7Q96NW7 1537 aa12.52□□□□□ -0.4
CDK5RAP2-208ENST00000472883 IQGAP1P46940 1657 aa12.52□□□□□ -0.4
CDK5RAP2-208ENST00000472883 SENP3Q9H4L4 574 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP2-208ENST00000472883 MED14O60244 1454 aa12.52□□□□□ -0.41
CDK5RAP2-208ENST00000472883 XIRP1Q702N8 1843 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP2-208ENST00000472883 ABCC1P33527 1531 aa12.51□□□□□ -0.41
CDK5RAP2-208ENST00000472883 PREX2Q70Z35 1606 aa12.48□□□□□ -0.41
CDK5RAP2-208ENST00000472883 ANKLE2Q86XL3 938 aa12.48□□□□□ -0.41
CDK5RAP2-208ENST00000472883 FAM135BQ49AJ0 1406 aa12.47□□□□□ -0.41
CDK5RAP2-208ENST00000472883 PLXNC1O60486 1568 aa12.47□□□□□ -0.41
CDK5RAP2-208ENST00000472883 NPHP4O75161 1426 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP2-208ENST00000472883 CDK11AQ9UQ88 783 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP2-208ENST00000472883 SAMD9LQ8IVG5 1584 aa12.44□□□□□ -0.42
CDK5RAP2-208ENST00000472883 ZC3H13Q5T200 1668 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP2-208ENST00000472883 ROBO1Q9Y6N7 1651 aa12.42□□□□□ -0.42
CDK5RAP2-208ENST00000472883 THEMISQ8N1K5 641 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP2-208ENST00000472883 TROQ12816 1431 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP2-208ENST00000472883 CDC42BPAQ5VT25 1732 aa12.42□□□□□ -0.42
CDK5RAP2-208ENST00000472883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDK5RAP2-208ENST00000472883 ADGBQ8N7X0 1667 aa12.42□□□□□ -0.42
CDK5RAP2-208ENST00000472883 CLIP1P30622 1438 aa12.41□□□□□ -0.42
CDK5RAP2-208ENST00000472883 FAM135AQ9P2D6 1515 aa12.4□□□□□ -0.42
CDK5RAP2-208ENST00000472883 TNRQ92752 1358 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms