RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 PTPRTO14522 1441 aa10.38□□□□□ -0.75
SIK3-208ENST00000472648 HECW1Q76N89 1606 aa10.37□□□□□ -0.75
SIK3-208ENST00000472648 FHOD3Q2V2M9 1422 aa10.37□□□□□ -0.75
SIK3-208ENST00000472648 FAM9AQ8IZU1 332 aaPredicted RBP10.37□□□□□ -0.75
SIK3-208ENST00000472648 MAGI2Q86UL8 1455 aa10.36□□□□□ -0.75
SIK3-208ENST00000472648 MYO5CQ9NQX4 1742 aa10.31□□□□□ -0.76
SIK3-208ENST00000472648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.31□□□□□ -0.76
SIK3-208ENST00000472648 HNRNPUL2Q1KMD3 747 aaKnown RBP10.31□□□□□ -0.76
SIK3-208ENST00000472648 C9orf84Q5VXU9 1444 aa10.31□□□□□ -0.76
SIK3-208ENST00000472648 UBAP1LF5GYI3 381 aa10.3□□□□□ -0.76
SIK3-208ENST00000472648 CEBPAP49715 358 aaPredicted RBP10.3□□□□□ -0.76
SIK3-208ENST00000472648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.29□□□□□ -0.76
SIK3-208ENST00000472648 ATP10AO60312 1499 aa10.29□□□□□ -0.76
SIK3-208ENST00000472648 SAMD9Q5K651 1589 aa10.28□□□□□ -0.76
SIK3-208ENST00000472648 CAMSAP1Q5T5Y3 1602 aa10.28□□□□□ -0.76
SIK3-208ENST00000472648 NCOA1Q15788 1441 aa10.27□□□□□ -0.77
SIK3-208ENST00000472648 PHF23Q9BUL5 403 aaPredicted RBP10.26□□□□□ -0.77
SIK3-208ENST00000472648 MROH2AA6NES4 1674 aa10.25□□□□□ -0.77
SIK3-208ENST00000472648 ZNF142P52746 1687 aaPredicted RBP10.25□□□□□ -0.77
SIK3-208ENST00000472648 NUP153P49790 1475 aaKnown RBP10.24□□□□□ -0.77
SIK3-208ENST00000472648 P3H3Q8IVL6 736 aa10.24□□□□□ -0.77
SIK3-208ENST00000472648 SCAF1Q9H7N4 1312 aaKnown RBP10.24□□□□□ -0.77
SIK3-208ENST00000472648 POLR1AO95602 1720 aaPredicted RBP10.23□□□□□ -0.77
SIK3-208ENST00000472648 SCAPERQ9BY12 1400 aa10.23□□□□□ -0.77
SIK3-208ENST00000472648 REREQ9P2R6 1566 aa10.22□□□□□ -0.77
SIK3-208ENST00000472648 DIP2CQ9Y2E4 1556 aa10.22□□□□□ -0.77
SIK3-208ENST00000472648 ABCA6Q8N139 1617 aa10.22□□□□□ -0.77
SIK3-208ENST00000472648 MYO3AQ8NEV4 1616 aa10.22□□□□□ -0.77
SIK3-208ENST00000472648 HSPA1LP34931 641 aa10.21□□□□□ -0.77
SIK3-208ENST00000472648 ZNF335Q9H4Z2 1342 aaPredicted RBP10.21□□□□□ -0.78
SIK3-208ENST00000472648 TRAPPC8Q9Y2L5 1435 aa10.21□□□□□ -0.78
SIK3-208ENST00000472648 PLEKHD1A6NEE1 506 aa10.2□□□□□ -0.78
SIK3-208ENST00000472648 KDM5CP41229 1560 aa10.2□□□□□ -0.78
SIK3-208ENST00000472648 ESF1Q9H501 851 aaKnown RBP10.2□□□□□ -0.78
SIK3-208ENST00000472648 ZNF518AQ6AHZ1 1483 aa10.19□□□□□ -0.78
SIK3-208ENST00000472648 AGLP35573 1532 aa10.18□□□□□ -0.78
SIK3-208ENST00000472648 PIP4K2BP78356 416 aa10.17□□□□□ -0.78
SIK3-208ENST00000472648 CLTCQ00610 1675 aaKnown RBP10.17□□□□□ -0.78
SIK3-208ENST00000472648 PRXQ9BXM0 1461 aa10.17□□□□□ -0.78
SIK3-208ENST00000472648 PLCH2O75038 1416 aa10.16□□□□□ -0.78
SIK3-208ENST00000472648 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
SIK3-208ENST00000472648 CEP170BQ9Y4F5 1589 aaPredicted RBP10.16□□□□□ -0.78
SIK3-208ENST00000472648 PLA2R1Q13018 1463 aa10.16□□□□□ -0.78
SIK3-208ENST00000472648 CNTLNQ9NXG0 1405 aa10.16□□□□□ -0.78
SIK3-208ENST00000472648 CPS1P31327 1500 aa10.15□□□□□ -0.78
SIK3-208ENST00000472648 ITSN2Q9NZM3 1697 aa10.15□□□□□ -0.79
SIK3-208ENST00000472648 NPATQ14207 1427 aa10.15□□□□□ -0.79
SIK3-208ENST00000472648 NCKAP5LQ9HCH0 1330 aa10.14□□□□□ -0.79
SIK3-208ENST00000472648 SETD1AO15047 1707 aaKnown RBP10.14□□□□□ -0.79
SIK3-208ENST00000472648 CDC42BPBQ9Y5S2 1711 aa10.14□□□□□ -0.79
SIK3-208ENST00000472648 TOM1O60784 492 aa10.14□□□□□ -0.79
SIK3-208ENST00000472648 KIF14Q15058 1648 aa10.14□□□□□ -0.79
SIK3-208ENST00000472648 ARHGAP5Q13017 1502 aa10.13□□□□□ -0.79
SIK3-208ENST00000472648 KIDINS220Q9ULH0 1771 aa10.13□□□□□ -0.79
SIK3-208ENST00000472648 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
SIK3-208ENST00000472648 TCOF1Q13428 1488 aaKnown RBP10.12□□□□□ -0.79
SIK3-208ENST00000472648 PKD2Q13563 968 aa10.12□□□□□ -0.79
SIK3-208ENST00000472648 EFCAB2Q5VUJ9 269 aa10.1□□□□□ -0.79
SIK3-208ENST00000472648 PPP6R1Q9UPN7 881 aa10.1□□□□□ -0.79
SIK3-208ENST00000472648 MLH3Q9UHC1 1453 aa10.1□□□□□ -0.79
SIK3-208ENST00000472648 PTPRKQ15262 1439 aa10.09□□□□□ -0.79
SIK3-208ENST00000472648 RNF17Q9BXT8 1623 aaKnown RBP10.09□□□□□ -0.79
SIK3-208ENST00000472648 DNMT1P26358 1616 aaKnown RBP10.08□□□□□ -0.8
SIK3-208ENST00000472648 PREX2Q70Z35 1606 aa10.08□□□□□ -0.8
SIK3-208ENST00000472648 ALKQ9UM73 1620 aa10.08□□□□□ -0.8
SIK3-208ENST00000472648 NEURL4Q96JN8 1562 aa10.07□□□□□ -0.8
SIK3-208ENST00000472648 SHANK2Q9UPX8 1470 aa10.07□□□□□ -0.8
SIK3-208ENST00000472648 AFAP1Q8N556 730 aa10.07□□□□□ -0.8
SIK3-208ENST00000472648 ABCC1P33527 1531 aa10.07□□□□□ -0.8
SIK3-208ENST00000472648 STRCP1A6NGW2 1772 aa10.06□□□□□ -0.8
SIK3-208ENST00000472648 SYNMO15061 1565 aa10.05□□□□□ -0.8
SIK3-208ENST00000472648 LRRIQ1Q96JM4 1722 aa10.05□□□□□ -0.8
SIK3-208ENST00000472648 RANGAP1P46060 587 aaPredicted RBP10.05□□□□□ -0.8
SIK3-208ENST00000472648 SENP3Q9H4L4 574 aaPredicted RBP10.05□□□□□ -0.8
SIK3-208ENST00000472648 CDC42BPAQ5VT25 1732 aa10.04□□□□□ -0.8
SIK3-208ENST00000472648 ZMYM3Q14202 1370 aa10.04□□□□□ -0.8
SIK3-208ENST00000472648 VWDEQ8N2E2 1590 aa10.04□□□□□ -0.8
SIK3-208ENST00000472648 IQGAP1P46940 1657 aa10.03□□□□□ -0.8
SIK3-208ENST00000472648 A2ML1A8K2U0 1454 aa10.03□□□□□ -0.8
SIK3-208ENST00000472648 RGS17Q9UGC6 210 aaPredicted RBP10.01□□□□□ -0.81
SIK3-208ENST00000472648 ADGBQ8N7X0 1667 aa10.01□□□□□ -0.81
SIK3-208ENST00000472648 XIRP1Q702N8 1843 aaKnown RBP10□□□□□ -0.81
SIK3-208ENST00000472648 DEPDC5O75140 1603 aa10□□□□□ -0.81
SIK3-208ENST00000472648 CLIP1P30622 1438 aa10□□□□□ -0.81
SIK3-208ENST00000472648 SAMD9LQ8IVG5 1584 aa10□□□□□ -0.81
SIK3-208ENST00000472648 PLXNC1O60486 1568 aa9.99□□□□□ -0.81
SIK3-208ENST00000472648 CDK11AQ9UQ88 783 aaPredicted RBP9.98□□□□□ -0.81
SIK3-208ENST00000472648 TROQ12816 1431 aaPredicted RBP9.98□□□□□ -0.81
SIK3-208ENST00000472648 ATP7AQ04656 1500 aa9.97□□□□□ -0.81
SIK3-208ENST00000472648 INO80Q9ULG1 1556 aaPredicted RBP9.97□□□□□ -0.81
SIK3-208ENST00000472648 ATP1B4Q9UN42 357 aaPredicted RBP9.97□□□□□ -0.81
SIK3-208ENST00000472648 POTEAQ6S8J7 498 aa9.95□□□□□ -0.82
SIK3-208ENST00000472648 LRRC7Q96NW7 1537 aa9.95□□□□□ -0.82
SIK3-208ENST00000472648 SYCP2Q9BX26 1530 aa9.95□□□□□ -0.82
SIK3-208ENST00000472648 ZC3H13Q5T200 1668 aaKnown RBP9.94□□□□□ -0.82
SIK3-208ENST00000472648 ROBO1Q9Y6N7 1651 aa9.93□□□□□ -0.82
SIK3-208ENST00000472648 A2MP01023 1474 aa9.93□□□□□ -0.82
SIK3-208ENST00000472648 NPHP4O75161 1426 aaPredicted RBP9.93□□□□□ -0.82
SIK3-208ENST00000472648 FMN1Q68DA7 1419 aa9.93□□□□□ -0.82
SIK3-208ENST00000472648 UGGT1Q9NYU2 1555 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms