RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 HECW1Q76N89 1606 aa16.76■□□□□ 0.27
SCAMP3-205ENST00000472397 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
SCAMP3-205ENST00000472397 CFAP74Q9C0B2 1584 aa16.72■□□□□ 0.27
SCAMP3-205ENST00000472397 PLCH2O75038 1416 aa16.72■□□□□ 0.27
SCAMP3-205ENST00000472397 AFAP1Q8N556 730 aa16.72■□□□□ 0.27
SCAMP3-205ENST00000472397 POGZQ7Z3K3 1410 aa16.71■□□□□ 0.27
SCAMP3-205ENST00000472397 KIF14Q15058 1648 aa16.71■□□□□ 0.27
SCAMP3-205ENST00000472397 EFCAB2Q5VUJ9 269 aa16.71■□□□□ 0.27
SCAMP3-205ENST00000472397 ARHGAP35Q9NRY4 1499 aa16.71■□□□□ 0.27
SCAMP3-205ENST00000472397 ZMYM4Q5VZL5 1548 aa16.69■□□□□ 0.26
SCAMP3-205ENST00000472397 FER1L4A9Z1Z3 1794 aa16.66■□□□□ 0.26
SCAMP3-205ENST00000472397 ARHGAP5Q13017 1502 aa16.65■□□□□ 0.26
SCAMP3-205ENST00000472397 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
SCAMP3-205ENST00000472397 CDK11AQ9UQ88 783 aaPredicted RBP16.65■□□□□ 0.26
SCAMP3-205ENST00000472397 ATP10AO60312 1499 aa16.65■□□□□ 0.26
SCAMP3-205ENST00000472397 MYO5CQ9NQX4 1742 aa16.64■□□□□ 0.25
SCAMP3-205ENST00000472397 MAGI2Q86UL8 1455 aa16.63■□□□□ 0.25
SCAMP3-205ENST00000472397 CERKQ8TCT0 537 aa16.63■□□□□ 0.25
SCAMP3-205ENST00000472397 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
SCAMP3-205ENST00000472397 LRRIQ1Q96JM4 1722 aa16.62■□□□□ 0.25
SCAMP3-205ENST00000472397 TROQ12816 1431 aaPredicted RBP16.62■□□□□ 0.25
SCAMP3-205ENST00000472397 ZNF777Q9ULD5 760 aaPredicted RBP16.61■□□□□ 0.25
SCAMP3-205ENST00000472397 ARHGEF12Q9NZN5 1544 aa16.6■□□□□ 0.25
SCAMP3-205ENST00000472397 CLIP1P30622 1438 aa16.58■□□□□ 0.24
SCAMP3-205ENST00000472397 TRAPPC8Q9Y2L5 1435 aa16.58■□□□□ 0.24
SCAMP3-205ENST00000472397 ZNF518AQ6AHZ1 1483 aa16.55■□□□□ 0.24
SCAMP3-205ENST00000472397 DIP2CQ9Y2E4 1556 aa16.55■□□□□ 0.24
SCAMP3-205ENST00000472397 ESF1Q9H501 851 aaKnown RBP16.54■□□□□ 0.24
SCAMP3-205ENST00000472397 CDC42BPBQ9Y5S2 1711 aa16.53■□□□□ 0.24
SCAMP3-205ENST00000472397 ABCA6Q8N139 1617 aa16.53■□□□□ 0.24
SCAMP3-205ENST00000472397 HNRNPMP52272 730 aaKnown RBP eCLIP16.52■□□□□ 0.24
SCAMP3-205ENST00000472397 PREX1Q8TCU6 1659 aa16.51■□□□□ 0.23
SCAMP3-205ENST00000472397 KDM5CP41229 1560 aa16.51■□□□□ 0.23
SCAMP3-205ENST00000472397 UHRF1BP1Q6BDS2 1440 aa16.5■□□□□ 0.23
SCAMP3-205ENST00000472397 CASKIN1Q8WXD9 1431 aa16.48■□□□□ 0.23
SCAMP3-205ENST00000472397 ABCC1P33527 1531 aa16.48■□□□□ 0.23
SCAMP3-205ENST00000472397 STRCQ7RTU9 1775 aa16.48■□□□□ 0.23
SCAMP3-205ENST00000472397 PREX2Q70Z35 1606 aa16.47■□□□□ 0.23
SCAMP3-205ENST00000472397 C3P01024 1663 aa16.46■□□□□ 0.23
SCAMP3-205ENST00000472397 ITSN2Q9NZM3 1697 aa16.46■□□□□ 0.23
SCAMP3-205ENST00000472397 MLH3Q9UHC1 1453 aa16.46■□□□□ 0.23
SCAMP3-205ENST00000472397 SPAG9O60271 1321 aaKnown RBP16.44■□□□□ 0.22
SCAMP3-205ENST00000472397 KIDINS220Q9ULH0 1771 aa16.43■□□□□ 0.22
SCAMP3-205ENST00000472397 CCDC18Q5T9S5 1454 aa16.43■□□□□ 0.22
SCAMP3-205ENST00000472397 CDC42BPAQ5VT25 1732 aa16.43■□□□□ 0.22
SCAMP3-205ENST00000472397 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
SCAMP3-205ENST00000472397 NCKAP5LQ9HCH0 1330 aa16.43■□□□□ 0.22
SCAMP3-205ENST00000472397 DISP3Q9P2K9 1392 aa16.42■□□□□ 0.22
SCAMP3-205ENST00000472397 SYCP2Q9BX26 1530 aa16.42■□□□□ 0.22
SCAMP3-205ENST00000472397 ILDR2Q71H61 639 aa16.42■□□□□ 0.22
SCAMP3-205ENST00000472397 SAMD9LQ8IVG5 1584 aa16.42■□□□□ 0.22
SCAMP3-205ENST00000472397 GGT6Q6P531 493 aa16.41■□□□□ 0.22
SCAMP3-205ENST00000472397 ZNF644Q9H582 1327 aaPredicted RBP16.41■□□□□ 0.22
SCAMP3-205ENST00000472397 SUPT6HQ7KZ85 1726 aaKnown RBP16.4■□□□□ 0.22
SCAMP3-205ENST00000472397 CFDP1Q9UEE9 299 aaPredicted RBP16.4■□□□□ 0.22
SCAMP3-205ENST00000472397 GPATCH8Q9UKJ3 1502 aaKnown RBP16.4■□□□□ 0.22
SCAMP3-205ENST00000472397 REREQ9P2R6 1566 aa16.38■□□□□ 0.21
SCAMP3-205ENST00000472397 AGLP35573 1532 aa16.38■□□□□ 0.21
SCAMP3-205ENST00000472397 FYCO1Q9BQS8 1478 aa16.37■□□□□ 0.21
SCAMP3-205ENST00000472397 ZMYM3Q14202 1370 aa16.37■□□□□ 0.21
SCAMP3-205ENST00000472397 SETD1BQ9UPS6 1966 aaKnown RBP16.36■□□□□ 0.21
SCAMP3-205ENST00000472397 CCNB3Q8WWL7 1395 aa16.36■□□□□ 0.21
SCAMP3-205ENST00000472397 PTPRTO14522 1441 aa16.35■□□□□ 0.21
SCAMP3-205ENST00000472397 CAMSAP1Q5T5Y3 1602 aa16.34■□□□□ 0.21
SCAMP3-205ENST00000472397 ZNF335Q9H4Z2 1342 aaPredicted RBP16.34■□□□□ 0.21
SCAMP3-205ENST00000472397 NCOA1Q15788 1441 aa16.34■□□□□ 0.21
SCAMP3-205ENST00000472397 CLTCQ00610 1675 aaKnown RBP16.34■□□□□ 0.21
SCAMP3-205ENST00000472397 MTUS2Q5JR59 1369 aa16.33■□□□□ 0.2
SCAMP3-205ENST00000472397 ATP7AQ04656 1500 aa16.32■□□□□ 0.2
SCAMP3-205ENST00000472397 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
SCAMP3-205ENST00000472397 LTBP4Q8N2S1 1624 aa16.31■□□□□ 0.2
SCAMP3-205ENST00000472397 A2MP01023 1474 aa16.31■□□□□ 0.2
SCAMP3-205ENST00000472397 UBAP1LF5GYI3 381 aa16.27■□□□□ 0.2
SCAMP3-205ENST00000472397 FBXO31Q5XUX0 539 aaPredicted RBP16.27■□□□□ 0.2
SCAMP3-205ENST00000472397 INO80Q9ULG1 1556 aaPredicted RBP16.26■□□□□ 0.19
SCAMP3-205ENST00000472397 PTPRKQ15262 1439 aa16.26■□□□□ 0.19
SCAMP3-205ENST00000472397 KIF3BO15066 747 aa16.25■□□□□ 0.19
SCAMP3-205ENST00000472397 NPATQ14207 1427 aa16.25■□□□□ 0.19
SCAMP3-205ENST00000472397 KIAA1107Q9UPP5 1409 aa16.25■□□□□ 0.19
SCAMP3-205ENST00000472397 TIAM1Q13009 1591 aa16.25■□□□□ 0.19
SCAMP3-205ENST00000472397 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
SCAMP3-205ENST00000472397 MYO3AQ8NEV4 1616 aa16.24■□□□□ 0.19
SCAMP3-205ENST00000472397 MROH2AA6NES4 1674 aa16.24■□□□□ 0.19
SCAMP3-205ENST00000472397 PLEKHH2Q8IVE3 1493 aa16.23■□□□□ 0.19
SCAMP3-205ENST00000472397 PLXNC1O60486 1568 aa16.23■□□□□ 0.19
SCAMP3-205ENST00000472397 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
SCAMP3-205ENST00000472397 SPATA31D1Q6ZQQ2 1576 aa16.22■□□□□ 0.19
SCAMP3-205ENST00000472397 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
SCAMP3-205ENST00000472397 PPP6R1Q9UPN7 881 aa16.21■□□□□ 0.19
SCAMP3-205ENST00000472397 MBD5Q9P267 1494 aa16.21■□□□□ 0.19
SCAMP3-205ENST00000472397 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.18
SCAMP3-205ENST00000472397 SOCS7O14512 581 aa16.2■□□□□ 0.18
SCAMP3-205ENST00000472397 PIP4K2BP78356 416 aa16.2■□□□□ 0.18
SCAMP3-205ENST00000472397 PKD2Q13563 968 aa16.19■□□□□ 0.18
SCAMP3-205ENST00000472397 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
SCAMP3-205ENST00000472397 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
SCAMP3-205ENST00000472397 EHBP1L1Q8N3D4 1523 aa16.18■□□□□ 0.18
SCAMP3-205ENST00000472397 DHX29Q7Z478 1369 aaKnown RBP16.17■□□□□ 0.18
SCAMP3-205ENST00000472397 ADGBQ8N7X0 1667 aa16.17■□□□□ 0.18
SCAMP3-205ENST00000472397 WASHC2CQ9Y4E1 1318 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms