RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 FHOD3Q2V2M9 1422 aa17.85■□□□□ 0.45
CDHR3-209ENST00000472116 IQSEC2Q5JU85 1478 aa17.85■□□□□ 0.45
CDHR3-209ENST00000472116 SIGLEC1Q9BZZ2 1709 aa17.85■□□□□ 0.45
CDHR3-209ENST00000472116 UHRF1BP1Q6BDS2 1440 aa17.84■□□□□ 0.45
CDHR3-209ENST00000472116 MAGI2Q86UL8 1455 aa17.82■□□□□ 0.44
CDHR3-209ENST00000472116 RAPGEF6Q8TEU7 1601 aa17.82■□□□□ 0.44
CDHR3-209ENST00000472116 PIAS4Q8N2W9 510 aaPredicted RBP17.81■□□□□ 0.44
CDHR3-209ENST00000472116 PTPRTO14522 1441 aa17.81■□□□□ 0.44
CDHR3-209ENST00000472116 ARHGEF12Q9NZN5 1544 aa17.78■□□□□ 0.44
CDHR3-209ENST00000472116 HECW1Q76N89 1606 aa17.77■□□□□ 0.44
CDHR3-209ENST00000472116 P3H3Q8IVL6 736 aa17.77■□□□□ 0.44
CDHR3-209ENST00000472116 LTBP4Q8N2S1 1624 aa17.76■□□□□ 0.43
CDHR3-209ENST00000472116 CEBPAP49715 358 aaPredicted RBP17.75■□□□□ 0.43
CDHR3-209ENST00000472116 C9orf84Q5VXU9 1444 aa17.72■□□□□ 0.43
CDHR3-209ENST00000472116 PLEKHD1A6NEE1 506 aa17.72■□□□□ 0.43
CDHR3-209ENST00000472116 ATP10AO60312 1499 aa17.71■□□□□ 0.43
CDHR3-209ENST00000472116 UBAP1LF5GYI3 381 aa17.7■□□□□ 0.42
CDHR3-209ENST00000472116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.68■□□□□ 0.42
CDHR3-209ENST00000472116 C3P01024 1663 aa17.67■□□□□ 0.42
CDHR3-209ENST00000472116 SAMD9Q5K651 1589 aa17.66■□□□□ 0.42
CDHR3-209ENST00000472116 ESF1Q9H501 851 aaKnown RBP17.66■□□□□ 0.42
CDHR3-209ENST00000472116 NUP153P49790 1475 aaKnown RBP17.66■□□□□ 0.42
CDHR3-209ENST00000472116 SCAPERQ9BY12 1400 aa17.65■□□□□ 0.42
CDHR3-209ENST00000472116 MED1Q15648 1581 aaPredicted RBP17.65■□□□□ 0.42
CDHR3-209ENST00000472116 NCOA1Q15788 1441 aa17.62■□□□□ 0.41
CDHR3-209ENST00000472116 MYT1LQ9UL68 1186 aa17.61■□□□□ 0.41
CDHR3-209ENST00000472116 PRXQ9BXM0 1461 aa17.61■□□□□ 0.41
CDHR3-209ENST00000472116 MYO5CQ9NQX4 1742 aa17.59■□□□□ 0.41
CDHR3-209ENST00000472116 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
CDHR3-209ENST00000472116 SUPT6HQ7KZ85 1726 aaKnown RBP17.58■□□□□ 0.41
CDHR3-209ENST00000472116 TRAPPC8Q9Y2L5 1435 aa17.58■□□□□ 0.41
CDHR3-209ENST00000472116 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.4
CDHR3-209ENST00000472116 CAMSAP1Q5T5Y3 1602 aa17.58■□□□□ 0.4
CDHR3-209ENST00000472116 ZNF518AQ6AHZ1 1483 aa17.55■□□□□ 0.4
CDHR3-209ENST00000472116 PLCH2O75038 1416 aa17.55■□□□□ 0.4
CDHR3-209ENST00000472116 ZNF335Q9H4Z2 1342 aaPredicted RBP17.54■□□□□ 0.4
CDHR3-209ENST00000472116 ADRA2BP18089 450 aa17.54■□□□□ 0.4
CDHR3-209ENST00000472116 EFCAB2Q5VUJ9 269 aa17.53■□□□□ 0.4
CDHR3-209ENST00000472116 REREQ9P2R6 1566 aa17.52■□□□□ 0.39
CDHR3-209ENST00000472116 DIP2CQ9Y2E4 1556 aa17.5■□□□□ 0.39
CDHR3-209ENST00000472116 CNTLNQ9NXG0 1405 aa17.5■□□□□ 0.39
CDHR3-209ENST00000472116 HSPA1LP34931 641 aa17.5■□□□□ 0.39
CDHR3-209ENST00000472116 KDM5CP41229 1560 aa17.49■□□□□ 0.39
CDHR3-209ENST00000472116 AGLP35573 1532 aa17.48■□□□□ 0.39
CDHR3-209ENST00000472116 RANGAP1P46060 587 aaPredicted RBP17.48■□□□□ 0.39
CDHR3-209ENST00000472116 PIP4K2BP78356 416 aa17.48■□□□□ 0.39
CDHR3-209ENST00000472116 NCKAP5LQ9HCH0 1330 aa17.47■□□□□ 0.39
CDHR3-209ENST00000472116 TOM1O60784 492 aa17.47■□□□□ 0.39
CDHR3-209ENST00000472116 MROH2AA6NES4 1674 aa17.47■□□□□ 0.39
CDHR3-209ENST00000472116 ABCA6Q8N139 1617 aa17.47■□□□□ 0.39
CDHR3-209ENST00000472116 PKD2Q13563 968 aa17.46■□□□□ 0.39
CDHR3-209ENST00000472116 NPATQ14207 1427 aa17.46■□□□□ 0.39
CDHR3-209ENST00000472116 ARHGAP5Q13017 1502 aa17.45■□□□□ 0.38
CDHR3-209ENST00000472116 ZNF142P52746 1687 aaPredicted RBP17.44■□□□□ 0.38
CDHR3-209ENST00000472116 CDK13Q14004 1512 aaKnown RBP17.43■□□□□ 0.38
CDHR3-209ENST00000472116 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
CDHR3-209ENST00000472116 PLA2R1Q13018 1463 aa17.43■□□□□ 0.38
CDHR3-209ENST00000472116 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
CDHR3-209ENST00000472116 KIF14Q15058 1648 aa17.4■□□□□ 0.38
CDHR3-209ENST00000472116 MLH3Q9UHC1 1453 aa17.39■□□□□ 0.37
CDHR3-209ENST00000472116 CDK11AQ9UQ88 783 aaPredicted RBP17.38■□□□□ 0.37
CDHR3-209ENST00000472116 CPS1P31327 1500 aa17.37■□□□□ 0.37
CDHR3-209ENST00000472116 CEP170BQ9Y4F5 1589 aaPredicted RBP17.37■□□□□ 0.37
CDHR3-209ENST00000472116 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
CDHR3-209ENST00000472116 POLR1AO95602 1720 aaPredicted RBP17.35■□□□□ 0.37
CDHR3-209ENST00000472116 CLTCQ00610 1675 aaKnown RBP17.34■□□□□ 0.37
CDHR3-209ENST00000472116 ZMYM3Q14202 1370 aa17.34■□□□□ 0.37
CDHR3-209ENST00000472116 PTPRKQ15262 1439 aa17.34■□□□□ 0.37
CDHR3-209ENST00000472116 ATP1B4Q9UN42 357 aaPredicted RBP17.34■□□□□ 0.37
CDHR3-209ENST00000472116 KIDINS220Q9ULH0 1771 aa17.33■□□□□ 0.36
CDHR3-209ENST00000472116 CDC42BPBQ9Y5S2 1711 aa17.33■□□□□ 0.36
CDHR3-209ENST00000472116 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
CDHR3-209ENST00000472116 CLIP1P30622 1438 aa17.32■□□□□ 0.36
CDHR3-209ENST00000472116 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
CDHR3-209ENST00000472116 ABCC1P33527 1531 aa17.28■□□□□ 0.36
CDHR3-209ENST00000472116 SHANK2Q9UPX8 1470 aa17.28■□□□□ 0.36
CDHR3-209ENST00000472116 PREX2Q70Z35 1606 aa17.27■□□□□ 0.36
CDHR3-209ENST00000472116 TROQ12816 1431 aaPredicted RBP17.26■□□□□ 0.35
CDHR3-209ENST00000472116 DNMT1P26358 1616 aaKnown RBP17.23■□□□□ 0.35
CDHR3-209ENST00000472116 A2ML1A8K2U0 1454 aa17.23■□□□□ 0.35
CDHR3-209ENST00000472116 FMN1Q68DA7 1419 aa17.22■□□□□ 0.35
CDHR3-209ENST00000472116 NEURL4Q96JN8 1562 aa17.19■□□□□ 0.34
CDHR3-209ENST00000472116 RNF17Q9BXT8 1623 aaKnown RBP17.18■□□□□ 0.34
CDHR3-209ENST00000472116 SAMD9LQ8IVG5 1584 aa17.18■□□□□ 0.34
CDHR3-209ENST00000472116 ALKQ9UM73 1620 aa17.17■□□□□ 0.34
CDHR3-209ENST00000472116 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
CDHR3-209ENST00000472116 GGT6Q6P531 493 aa17.16■□□□□ 0.34
CDHR3-209ENST00000472116 SPAG9O60271 1321 aaKnown RBP17.16■□□□□ 0.34
CDHR3-209ENST00000472116 VWDEQ8N2E2 1590 aa17.15■□□□□ 0.34
CDHR3-209ENST00000472116 ANKLE2Q86XL3 938 aa17.15■□□□□ 0.34
CDHR3-209ENST00000472116 RGS17Q9UGC6 210 aaPredicted RBP17.15■□□□□ 0.34
CDHR3-209ENST00000472116 SYNMO15061 1565 aa17.14■□□□□ 0.33
CDHR3-209ENST00000472116 EEA1Q15075 1411 aa17.13■□□□□ 0.33
CDHR3-209ENST00000472116 ATP7AQ04656 1500 aa17.13■□□□□ 0.33
CDHR3-209ENST00000472116 PLXNC1O60486 1568 aa17.13■□□□□ 0.33
CDHR3-209ENST00000472116 LRRIQ1Q96JM4 1722 aa17.13■□□□□ 0.33
CDHR3-209ENST00000472116 A2MP01023 1474 aa17.12■□□□□ 0.33
CDHR3-209ENST00000472116 IQGAP1P46940 1657 aa17.11■□□□□ 0.33
CDHR3-209ENST00000472116 ADGBQ8N7X0 1667 aa17.11■□□□□ 0.33
CDHR3-209ENST00000472116 SETD1AO15047 1707 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms