RNA–Protein interactions for RNA: ENST00000471462.2

SUSD3-204, Transcript of sushi domain containing 3, humanhuman

TSL 3

Gene SUSD3, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-204ENST00000471462 DISP3Q9P2K9 1392 aa16.03■□□□□ 0.16
SUSD3-204ENST00000471462 MLECQ14165 292 aa16.03■□□□□ 0.16
SUSD3-204ENST00000471462 TTC37Q6PGP7 1564 aa16.03■□□□□ 0.16
SUSD3-204ENST00000471462 CFAP74Q9C0B2 1584 aa16.03■□□□□ 0.16
SUSD3-204ENST00000471462 HECW1Q76N89 1606 aa16■□□□□ 0.15
SUSD3-204ENST00000471462 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
SUSD3-204ENST00000471462 FER1L4A9Z1Z3 1794 aa15.99■□□□□ 0.15
SUSD3-204ENST00000471462 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
SUSD3-204ENST00000471462 SCAPERQ9BY12 1400 aa15.97■□□□□ 0.15
SUSD3-204ENST00000471462 DMRT2Q9Y5R5 561 aa15.97■□□□□ 0.15
SUSD3-204ENST00000471462 CEBPAP49715 358 aaPredicted RBP15.96■□□□□ 0.15
SUSD3-204ENST00000471462 ATP10AO60312 1499 aa15.96■□□□□ 0.14
SUSD3-204ENST00000471462 PREX1Q8TCU6 1659 aa15.95■□□□□ 0.14
SUSD3-204ENST00000471462 RANGAP1P46060 587 aaPredicted RBP15.95■□□□□ 0.14
SUSD3-204ENST00000471462 PLCH2O75038 1416 aa15.94■□□□□ 0.14
SUSD3-204ENST00000471462 STRCQ7RTU9 1775 aa15.94■□□□□ 0.14
SUSD3-204ENST00000471462 C9orf84Q5VXU9 1444 aa15.93■□□□□ 0.14
SUSD3-204ENST00000471462 UHRF1BP1Q6BDS2 1440 aa15.9■□□□□ 0.14
SUSD3-204ENST00000471462 CDK13Q14004 1512 aaKnown RBP15.89■□□□□ 0.13
SUSD3-204ENST00000471462 PTPRTO14522 1441 aa15.88■□□□□ 0.13
SUSD3-204ENST00000471462 EFCAB2Q5VUJ9 269 aa15.88■□□□□ 0.13
SUSD3-204ENST00000471462 SPATA31D1Q6ZQQ2 1576 aa15.87■□□□□ 0.13
SUSD3-204ENST00000471462 AFAP1Q8N556 730 aa15.84■□□□□ 0.13
SUSD3-204ENST00000471462 ZNF518AQ6AHZ1 1483 aa15.84■□□□□ 0.13
SUSD3-204ENST00000471462 LTBP4Q8N2S1 1624 aa15.83■□□□□ 0.13
SUSD3-204ENST00000471462 SETD1BQ9UPS6 1966 aaKnown RBP15.83■□□□□ 0.12
SUSD3-204ENST00000471462 KDM5CP41229 1560 aa15.82■□□□□ 0.12
SUSD3-204ENST00000471462 EEA1Q15075 1411 aa15.81■□□□□ 0.12
SUSD3-204ENST00000471462 IQSEC2Q5JU85 1478 aa15.81■□□□□ 0.12
SUSD3-204ENST00000471462 REREQ9P2R6 1566 aa15.8■□□□□ 0.12
SUSD3-204ENST00000471462 MYO5CQ9NQX4 1742 aa15.8■□□□□ 0.12
SUSD3-204ENST00000471462 DIP2CQ9Y2E4 1556 aa15.79■□□□□ 0.12
SUSD3-204ENST00000471462 TRAPPC8Q9Y2L5 1435 aa15.78■□□□□ 0.12
SUSD3-204ENST00000471462 C3P01024 1663 aa15.78■□□□□ 0.12
SUSD3-204ENST00000471462 NCOA1Q15788 1441 aa15.77■□□□□ 0.12
SUSD3-204ENST00000471462 CDK11AQ9UQ88 783 aaPredicted RBP15.77■□□□□ 0.12
SUSD3-204ENST00000471462 MLH3Q9UHC1 1453 aa15.77■□□□□ 0.11
SUSD3-204ENST00000471462 KIF14Q15058 1648 aa15.76■□□□□ 0.11
SUSD3-204ENST00000471462 AGLP35573 1532 aa15.76■□□□□ 0.11
SUSD3-204ENST00000471462 ARHGAP5Q13017 1502 aa15.76■□□□□ 0.11
SUSD3-204ENST00000471462 PIAS4Q8N2W9 510 aaPredicted RBP15.75■□□□□ 0.11
SUSD3-204ENST00000471462 MYT1LQ9UL68 1186 aa15.75■□□□□ 0.11
SUSD3-204ENST00000471462 ATP1B4Q9UN42 357 aaPredicted RBP15.75■□□□□ 0.11
SUSD3-204ENST00000471462 ABCA6Q8N139 1617 aa15.74■□□□□ 0.11
SUSD3-204ENST00000471462 TROQ12816 1431 aaPredicted RBP15.74■□□□□ 0.11
SUSD3-204ENST00000471462 FMN1Q68DA7 1419 aa15.74■□□□□ 0.11
SUSD3-204ENST00000471462 ESF1Q9H501 851 aaKnown RBP15.73■□□□□ 0.11
SUSD3-204ENST00000471462 CNTLNQ9NXG0 1405 aa15.71■□□□□ 0.11
SUSD3-204ENST00000471462 CAMSAP1Q5T5Y3 1602 aa15.69■□□□□ 0.1
SUSD3-204ENST00000471462 CLIP1P30622 1438 aa15.68■□□□□ 0.1
SUSD3-204ENST00000471462 NPATQ14207 1427 aa15.68■□□□□ 0.1
SUSD3-204ENST00000471462 ARHGAP35Q9NRY4 1499 aa15.68■□□□□ 0.1
SUSD3-204ENST00000471462 UBAP1LF5GYI3 381 aa15.68■□□□□ 0.1
SUSD3-204ENST00000471462 CDC42BPBQ9Y5S2 1711 aa15.68■□□□□ 0.1
SUSD3-204ENST00000471462 ZNF335Q9H4Z2 1342 aaPredicted RBP15.68■□□□□ 0.1
SUSD3-204ENST00000471462 NCKAP5LQ9HCH0 1330 aa15.68■□□□□ 0.1
SUSD3-204ENST00000471462 ABCC1P33527 1531 aa15.67■□□□□ 0.1
SUSD3-204ENST00000471462 ZMYM3Q14202 1370 aa15.65■□□□□ 0.1
SUSD3-204ENST00000471462 KIDINS220Q9ULH0 1771 aa15.65■□□□□ 0.1
SUSD3-204ENST00000471462 PREX2Q70Z35 1606 aa15.63■□□□□ 0.09
SUSD3-204ENST00000471462 MROH2AA6NES4 1674 aa15.63■□□□□ 0.09
SUSD3-204ENST00000471462 ITSN2Q9NZM3 1697 aa15.63■□□□□ 0.09
SUSD3-204ENST00000471462 UBTFP17480 764 aaKnown RBP15.62■□□□□ 0.09
SUSD3-204ENST00000471462 PKD2Q13563 968 aa15.62■□□□□ 0.09
SUSD3-204ENST00000471462 LRRIQ1Q96JM4 1722 aa15.62■□□□□ 0.09
SUSD3-204ENST00000471462 PLA2R1Q13018 1463 aa15.61■□□□□ 0.09
SUSD3-204ENST00000471462 TCOF1Q13428 1488 aaKnown RBP15.6■□□□□ 0.09
SUSD3-204ENST00000471462 SAMD9LQ8IVG5 1584 aa15.58■□□□□ 0.09
SUSD3-204ENST00000471462 EHMT2Q96KQ7 1210 aa15.58■□□□□ 0.08
SUSD3-204ENST00000471462 ZNF142P52746 1687 aaPredicted RBP15.57■□□□□ 0.08
SUSD3-204ENST00000471462 PTPRKQ15262 1439 aa15.57■□□□□ 0.08
SUSD3-204ENST00000471462 MYO3AQ8NEV4 1616 aa15.56■□□□□ 0.08
SUSD3-204ENST00000471462 CEP170BQ9Y4F5 1589 aaPredicted RBP15.55■□□□□ 0.08
SUSD3-204ENST00000471462 SPAG9O60271 1321 aaKnown RBP15.55■□□□□ 0.08
SUSD3-204ENST00000471462 HSPA1LP34931 641 aa15.55■□□□□ 0.08
SUSD3-204ENST00000471462 PPP6R1Q9UPN7 881 aa15.55■□□□□ 0.08
SUSD3-204ENST00000471462 CDC42BPAQ5VT25 1732 aa15.54■□□□□ 0.08
SUSD3-204ENST00000471462 MED1Q15648 1581 aaPredicted RBP15.53■□□□□ 0.08
SUSD3-204ENST00000471462 CCDC18Q5T9S5 1454 aa15.53■□□□□ 0.08
SUSD3-204ENST00000471462 CASKIN1Q8WXD9 1431 aa15.53■□□□□ 0.08
SUSD3-204ENST00000471462 HNRNPMP52272 730 aaKnown RBP eCLIP15.53■□□□□ 0.08
SUSD3-204ENST00000471462 ZNF777Q9ULD5 760 aaPredicted RBP15.53■□□□□ 0.08
SUSD3-204ENST00000471462 SUPT6HQ7KZ85 1726 aaKnown RBP15.53■□□□□ 0.08
SUSD3-204ENST00000471462 CLTCQ00610 1675 aaKnown RBP15.53■□□□□ 0.08
SUSD3-204ENST00000471462 PLXNC1O60486 1568 aa15.53■□□□□ 0.08
SUSD3-204ENST00000471462 SYCP2Q9BX26 1530 aa15.52■□□□□ 0.07
SUSD3-204ENST00000471462 A2MP01023 1474 aa15.51■□□□□ 0.07
SUSD3-204ENST00000471462 ATP7AQ04656 1500 aa15.5■□□□□ 0.07
SUSD3-204ENST00000471462 GPATCH8Q9UKJ3 1502 aaKnown RBP15.5■□□□□ 0.07
SUSD3-204ENST00000471462 PIP4K2BP78356 416 aa15.5■□□□□ 0.07
SUSD3-204ENST00000471462 GGT6Q6P531 493 aa15.5■□□□□ 0.07
SUSD3-204ENST00000471462 KIAA1107Q9UPP5 1409 aa15.5■□□□□ 0.07
SUSD3-204ENST00000471462 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
SUSD3-204ENST00000471462 TOM1O60784 492 aa15.49■□□□□ 0.07
SUSD3-204ENST00000471462 A2ML1A8K2U0 1454 aa15.48■□□□□ 0.07
SUSD3-204ENST00000471462 INO80Q9ULG1 1556 aaPredicted RBP15.48■□□□□ 0.07
SUSD3-204ENST00000471462 DNMT1P26358 1616 aaKnown RBP15.47■□□□□ 0.07
SUSD3-204ENST00000471462 CPS1P31327 1500 aa15.47■□□□□ 0.07
SUSD3-204ENST00000471462 SHANK2Q9UPX8 1470 aa15.46■□□□□ 0.07
SUSD3-204ENST00000471462 PLEKHH2Q8IVE3 1493 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms